Wall clock time and date at job start Tue Mar 9 2021 13:10:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36549 * 126.64399 * 2 1 4 4 C 1.46654 * 125.98529 * 0.03839 * 3 2 1 5 5 O 1.21694 * 120.00275 * 359.71787 * 4 3 2 6 6 N 1.34781 * 119.99847 * 179.71358 * 4 3 2 7 7 C 1.46500 * 119.99985 * 179.97438 * 6 4 3 8 8 H 1.09002 * 112.85221 * 334.67013 * 7 6 4 9 9 C 1.53785 * 113.68813 * 105.94035 * 7 6 4 10 10 C 1.53779 * 87.08093 * 139.99098 * 9 7 6 11 11 H 1.09003 * 113.61186 * 89.11185 * 10 9 7 12 12 C 1.52998 * 113.68908 * 220.00507 * 10 9 7 13 13 F 1.39902 * 109.46828 * 162.53405 * 12 10 9 14 14 C 1.53781 * 113.61339 * 203.47543 * 7 6 4 15 15 O 1.34912 * 108.02273 * 179.78028 * 3 2 1 16 16 C 1.33925 * 109.38434 * 0.22406 * 15 3 2 17 17 C 1.50706 * 125.61340 * 180.02562 * 16 15 3 18 18 O 1.42898 * 109.46915 * 270.02076 * 17 16 15 19 19 C 1.35902 * 117.00416 * 180.02562 * 18 17 16 20 20 C 1.38731 * 120.04928 * 359.72942 * 19 18 17 21 21 C 1.38151 * 119.94054 * 179.74951 * 20 19 18 22 22 C 1.38267 * 120.05637 * 0.49938 * 21 20 19 23 23 C 1.50692 * 119.94471 * 179.74881 * 22 21 20 24 24 O 1.42897 * 109.47302 * 245.02387 * 23 22 21 25 25 Si 1.86295 * 109.47246 * 5.02575 * 23 22 21 26 26 C 1.38276 * 120.10905 * 359.77402 * 22 21 20 27 27 C 1.38140 * 120.05479 * 359.97438 * 26 22 21 28 28 C 1.35129 * 108.77172 * 0.02562 * 16 15 3 29 29 H 1.08999 * 109.47496 * 90.00493 * 1 2 3 30 30 H 1.09007 * 109.47088 * 209.99952 * 1 2 3 31 31 H 1.08996 * 109.47217 * 329.99898 * 1 2 3 32 32 H 0.96998 * 119.99866 * 0.02562 * 6 4 3 33 33 H 1.09003 * 113.60734 * 254.54218 * 9 7 6 34 34 H 1.08996 * 113.61146 * 25.43716 * 9 7 6 35 35 H 1.09001 * 109.47378 * 282.53748 * 12 10 9 36 36 H 1.08996 * 109.47231 * 42.53978 * 12 10 9 37 37 H 1.09005 * 113.61302 * 334.48230 * 14 7 6 38 38 H 1.08993 * 113.62030 * 105.39076 * 14 7 6 39 39 H 1.08996 * 109.47217 * 30.02302 * 17 16 15 40 40 H 1.08998 * 109.46802 * 150.02650 * 17 16 15 41 41 H 1.07996 * 120.03082 * 359.97438 * 20 19 18 42 42 H 1.07997 * 119.96994 * 180.22999 * 21 20 19 43 43 H 1.09008 * 109.47269 * 125.02297 * 23 22 21 44 44 H 0.96706 * 114.00404 * 180.02562 * 24 23 22 45 45 H 1.48503 * 110.00312 * 178.67983 * 25 23 22 46 46 H 1.48502 * 110.00031 * 299.99835 * 25 23 22 47 47 H 1.07992 * 119.96967 * 179.97438 * 26 22 21 48 48 H 1.07999 * 120.02616 * 179.97438 * 27 26 22 49 49 H 1.07998 * 126.44389 * 179.97438 * 28 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3219 1.0956 0.0000 4 6 1.8841 2.4953 0.0008 5 8 0.6966 2.7614 -0.0036 6 7 2.7969 3.4869 0.0065 7 6 2.3596 4.8851 0.0068 8 1 1.3687 5.0188 -0.4273 9 6 2.5381 5.5881 1.3628 10 6 2.9930 6.8262 0.5723 11 1 2.1752 7.4905 0.2929 12 6 4.1679 7.5673 1.2134 13 9 4.7620 8.4078 0.2658 14 6 3.4117 5.8597 -0.5482 15 8 3.6004 0.6648 0.0049 16 6 3.6183 -0.6743 0.0031 17 6 4.8550 -1.5355 0.0078 18 8 5.2526 -1.8053 -1.3380 19 6 6.3588 -2.5753 -1.5120 20 6 7.0507 -3.0565 -0.4100 21 6 8.1719 -3.8434 -0.5895 22 6 8.6107 -4.1429 -1.8661 23 6 9.8373 -4.9967 -2.0589 24 8 10.8648 -4.2212 -2.6792 25 14 10.4346 -5.6086 -0.4038 26 6 7.9260 -3.6597 -2.9660 27 6 6.8013 -2.8768 -2.7918 28 6 2.3448 -1.1262 -0.0036 29 1 -0.3634 -0.0001 -1.0276 30 1 -0.3634 -0.8900 0.5139 31 1 -0.3633 0.8899 0.5138 32 1 3.7434 3.2748 0.0098 33 1 1.6038 5.7349 1.9047 34 1 3.3229 5.1519 1.9807 35 1 3.8077 8.1629 2.0523 36 1 4.9024 6.8450 1.5695 37 1 4.4355 5.4978 -0.4526 38 1 3.1829 6.2260 -1.5489 39 1 5.6592 -1.0137 0.5265 40 1 4.6420 -2.4744 0.5189 41 1 6.7110 -2.8192 0.5873 42 1 8.7087 -4.2213 0.2680 43 1 9.5913 -5.8480 -2.6938 44 1 11.6857 -4.7082 -2.8346 45 1 11.6251 -6.4779 -0.5830 46 1 10.7733 -4.4575 0.4712 47 1 8.2709 -3.8947 -3.9621 48 1 6.2672 -2.4994 -3.6513 49 1 2.0307 -2.1594 -0.0070 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_4549632.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:48 Heat of formation + Delta-G solvation = -81.660302 kcal Electronic energy + Delta-G solvation = -32718.436477 eV Core-core repulsion = 27915.668589 eV Total energy + Delta-G solvation = -4802.767887 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.156 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -48.55817 -43.95180 -41.30714 -41.12381 -39.42303 -39.14705 -37.37798 -35.53735 -34.67252 -33.21472 -32.06216 -31.63479 -29.76267 -28.86200 -28.02585 -26.76676 -26.17418 -24.49665 -23.77041 -22.71798 -22.23769 -22.07043 -21.26647 -20.53550 -19.46321 -19.18900 -18.54500 -17.80410 -17.75545 -17.47755 -17.02917 -16.87800 -16.78926 -16.74002 -16.44376 -16.04465 -15.86327 -15.69685 -15.56881 -15.36839 -15.07226 -14.67450 -14.46967 -14.30394 -14.11870 -14.02690 -13.94890 -13.71090 -13.61650 -13.55210 -13.43406 -13.36649 -13.11543 -12.83517 -12.61875 -12.46981 -12.20657 -11.87749 -11.84461 -11.71569 -11.56114 -11.43318 -11.21954 -10.81466 -10.46597 -10.32208 -10.03007 -9.72564 -9.23082 -4.91933 -0.28342 0.27177 0.31745 0.95594 1.32282 1.34383 1.61056 1.91497 1.95670 1.97284 2.36824 2.61859 3.26695 3.31329 3.35980 3.44574 3.59103 3.62724 3.65164 3.72657 3.74942 3.83755 3.98520 4.00907 4.07441 4.09401 4.14637 4.23173 4.28649 4.30301 4.41334 4.45276 4.48440 4.56420 4.63169 4.63891 4.70056 4.71314 4.73791 4.79931 4.90872 4.96259 4.97754 4.98947 5.05978 5.14446 5.16469 5.25608 5.31724 5.43451 5.51617 5.67308 5.68937 6.28476 6.28897 6.60198 6.87442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 C -0.095 4.095 3 C -0.096 4.096 4 C 0.603 3.397 5 O -0.545 6.545 6 N -0.699 5.699 7 C 0.116 3.884 8 H 0.106 0.894 9 C -0.133 4.133 10 C -0.139 4.139 11 H 0.106 0.894 12 C 0.067 3.933 13 F -0.237 7.237 14 C -0.134 4.134 15 O -0.162 6.162 16 C 0.010 3.990 17 C 0.135 3.865 18 O -0.326 6.326 19 C 0.125 3.875 20 C -0.201 4.201 21 C -0.081 4.081 22 C -0.123 4.123 23 C -0.083 4.083 24 O -0.560 6.560 25 Si 0.765 3.235 26 C -0.062 4.062 27 C -0.162 4.162 28 C -0.185 4.185 29 H 0.076 0.924 30 H 0.090 0.910 31 H 0.071 0.929 32 H 0.415 0.585 33 H 0.078 0.922 34 H 0.101 0.899 35 H 0.091 0.909 36 H 0.090 0.910 37 H 0.099 0.901 38 H 0.077 0.923 39 H 0.101 0.899 40 H 0.133 0.867 41 H 0.161 0.839 42 H 0.146 0.854 43 H 0.093 0.907 44 H 0.394 0.606 45 H -0.290 1.290 46 H -0.296 1.296 47 H 0.136 0.864 48 H 0.134 0.866 49 H 0.185 0.815 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.648 -5.368 3.987 6.887 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.098 4.098 3 C -0.148 4.148 4 C 0.390 3.610 5 O -0.425 6.425 6 N -0.349 5.349 7 C 0.011 3.989 8 H 0.124 0.876 9 C -0.172 4.172 10 C -0.158 4.158 11 H 0.124 0.876 12 C 0.012 3.988 13 F -0.218 7.218 14 C -0.172 4.172 15 O -0.058 6.058 16 C -0.041 4.041 17 C 0.061 3.939 18 O -0.241 6.241 19 C 0.080 3.920 20 C -0.219 4.219 21 C -0.098 4.098 22 C -0.123 4.123 23 C -0.192 4.192 24 O -0.370 6.370 25 Si 0.671 3.329 26 C -0.080 4.080 27 C -0.181 4.181 28 C -0.204 4.204 29 H 0.095 0.905 30 H 0.109 0.891 31 H 0.090 0.910 32 H 0.252 0.748 33 H 0.097 0.903 34 H 0.119 0.881 35 H 0.109 0.891 36 H 0.108 0.892 37 H 0.118 0.882 38 H 0.096 0.904 39 H 0.119 0.881 40 H 0.151 0.849 41 H 0.179 0.821 42 H 0.163 0.837 43 H 0.111 0.889 44 H 0.244 0.756 45 H -0.218 1.218 46 H -0.224 1.224 47 H 0.154 0.846 48 H 0.152 0.848 49 H 0.202 0.798 Dipole moment (debyes) X Y Z Total from point charges 1.145 -4.408 4.414 6.342 hybrid contribution 1.312 0.290 -1.026 1.690 sum 2.456 -4.118 3.388 5.871 Atomic orbital electron populations 1.20456 0.87394 1.04029 1.03240 1.20991 0.98465 0.91314 0.98998 1.21878 0.81734 0.94930 1.16269 1.16655 0.85678 0.82360 0.76286 1.90851 1.16847 1.82759 1.52065 1.45865 1.09998 1.05713 1.73329 1.22658 0.99794 0.78051 0.98369 0.87643 1.23401 1.03007 0.94359 0.96404 1.22940 0.99049 0.96121 0.97701 0.87600 1.22159 0.94594 0.92611 0.89424 1.92743 1.85937 1.74511 1.68619 1.23367 0.99461 0.94962 0.99414 1.83956 1.28086 1.22658 1.71120 1.22420 0.96990 0.80252 1.04476 1.21274 0.91573 0.98293 0.82764 1.86106 1.42181 1.66441 1.29326 1.19067 0.86548 0.91715 0.94644 1.21455 0.98400 1.03035 0.99043 1.21033 0.96045 0.96251 0.96477 1.19422 0.96973 1.02163 0.93775 1.24983 0.88545 0.96230 1.09434 1.86553 1.26573 1.42395 1.81512 0.94202 0.84204 0.79222 0.75311 1.20954 0.92908 0.94658 0.99457 1.20633 0.99053 1.02861 0.95531 1.21902 0.90801 1.01293 1.06424 0.90528 0.89132 0.91011 0.74818 0.90295 0.88082 0.89119 0.89160 0.88215 0.90377 0.88116 0.84902 0.82142 0.83701 0.88896 0.75605 1.21754 1.22397 0.84587 0.84801 0.79758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.30 9.81 71.23 0.70 0.40 16 2 C -0.09 -0.45 6.20 -19.74 -0.12 -0.57 16 3 C -0.10 -0.58 7.13 24.07 0.17 -0.41 16 4 C 0.60 4.25 7.79 86.44 0.67 4.93 16 5 O -0.55 -6.85 14.36 -4.33 -0.06 -6.91 16 6 N -0.70 -0.77 5.36 -444.01 -2.38 -3.15 16 7 C 0.12 -0.05 4.22 45.52 0.19 0.14 16 8 H 0.11 0.32 7.50 -2.39 -0.02 0.30 16 9 C -0.13 0.49 7.44 31.12 0.23 0.72 16 10 C -0.14 0.52 4.10 -10.27 -0.04 0.48 16 11 H 0.11 -0.37 8.14 -2.39 -0.02 -0.39 16 12 C 0.07 -0.24 7.33 71.98 0.53 0.29 16 13 F -0.24 -0.97 17.30 44.97 0.78 -0.19 16 14 C -0.13 0.39 7.34 31.12 0.23 0.62 16 15 O -0.16 -0.61 10.40 -4.97 -0.05 -0.67 16 16 C 0.01 0.01 6.94 24.97 0.17 0.18 16 17 C 0.13 -0.59 5.27 71.24 0.38 -0.21 16 18 O -0.33 -0.59 10.12 -92.45 -0.94 -1.52 16 19 C 0.13 0.19 6.69 22.51 0.15 0.34 16 20 C -0.20 0.43 9.04 22.37 0.20 0.63 16 21 C -0.08 0.09 8.66 22.26 0.19 0.28 16 22 C -0.12 -0.16 5.39 -19.85 -0.11 -0.26 16 23 C -0.08 0.11 2.79 71.23 0.20 0.31 16 24 O -0.56 -1.05 12.81 -148.98 -1.91 -2.96 16 25 Si 0.76 -2.46 29.85 68.60 2.05 -0.42 16 26 C -0.06 -0.14 9.68 22.26 0.22 0.08 16 27 C -0.16 -0.46 9.99 22.36 0.22 -0.23 16 28 C -0.19 -0.10 10.73 22.07 0.24 0.13 16 29 H 0.08 0.23 8.14 -2.39 -0.02 0.21 16 30 H 0.09 -0.12 8.14 -2.38 -0.02 -0.14 16 31 H 0.07 0.48 6.45 -2.39 -0.02 0.47 16 32 H 0.41 -1.08 8.47 -92.71 -0.79 -1.87 16 33 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 34 H 0.10 -0.58 8.04 -2.39 -0.02 -0.60 16 35 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 36 H 0.09 -0.61 8.06 -2.39 -0.02 -0.63 16 37 H 0.10 -0.46 8.07 -2.38 -0.02 -0.48 16 38 H 0.08 -0.13 8.14 -2.39 -0.02 -0.15 16 39 H 0.10 -0.74 7.65 -2.39 -0.02 -0.76 16 40 H 0.13 -1.40 7.67 -2.39 -0.02 -1.42 16 41 H 0.16 -1.37 6.30 -2.91 -0.02 -1.39 16 42 H 0.15 -0.70 4.86 -2.91 -0.01 -0.72 16 43 H 0.09 -0.47 7.96 -2.38 -0.02 -0.49 16 44 H 0.39 -2.37 8.74 -74.05 -0.65 -3.02 16 45 H -0.29 -0.41 7.11 99.48 0.71 0.29 16 46 H -0.30 -1.03 7.05 99.48 0.70 -0.33 16 47 H 0.14 0.06 8.06 -2.91 -0.02 0.04 16 48 H 0.13 0.24 8.06 -2.91 -0.02 0.21 16 49 H 0.19 -0.91 8.06 -2.91 -0.02 -0.94 16 Total: 0.00 -22.10 413.66 1.52 -20.58 By element: Atomic # 1 Polarization: -12.22 SS G_CDS: -0.39 Total: -12.61 kcal Atomic # 6 Polarization: 3.42 SS G_CDS: 4.42 Total: 7.84 kcal Atomic # 7 Polarization: -0.77 SS G_CDS: -2.38 Total: -3.15 kcal Atomic # 8 Polarization: -9.10 SS G_CDS: -2.96 Total: -12.05 kcal Atomic # 9 Polarization: -0.97 SS G_CDS: 0.78 Total: -0.19 kcal Atomic # 14 Polarization: -2.46 SS G_CDS: 2.05 Total: -0.42 kcal Total: -22.10 1.52 -20.58 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4549632.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -61.081 kcal (2) G-P(sol) polarization free energy of solvation -22.096 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.177 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.517 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.579 kcal (6) G-S(sol) free energy of system = (1) + (5) -81.660 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds