Wall clock time and date at job start Tue Mar 9 2021 13:10:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50699 * 109.47158 * 240.00413 * 2 1 3 5 5 C 1.38271 * 119.94563 * 119.72381 * 4 2 1 6 6 C 1.38146 * 120.05540 * 179.72476 * 5 4 2 7 7 C 1.38728 * 119.94387 * 0.57065 * 6 5 4 8 8 O 1.35895 * 120.05690 * 179.67938 * 7 6 5 9 9 C 1.42897 * 117.00208 * 0.02633 * 8 7 6 10 10 C 1.50699 * 109.47708 * 180.02562 * 9 8 7 11 11 C 1.36415 * 125.80639 * 89.99000 * 10 9 8 12 12 C 1.47381 * 127.19053 * 359.96637 * 11 10 9 13 13 O 1.21622 * 119.99714 * 359.97438 * 12 11 10 14 14 N 1.34766 * 120.00201 * 179.97438 * 12 11 10 15 15 C 1.46499 * 120.00396 * 179.97438 * 14 12 11 16 16 H 1.09006 * 112.84573 * 25.33333 * 15 14 12 17 17 C 1.53783 * 113.61614 * 156.52780 * 15 14 12 18 18 C 1.53787 * 87.07810 * 139.98177 * 17 15 14 19 19 H 1.09004 * 113.61459 * 89.20316 * 18 17 15 20 20 C 1.52997 * 113.61456 * 220.01522 * 18 17 15 21 21 F 1.39905 * 109.47388 * 300.00590 * 20 18 17 22 22 C 1.53780 * 113.61700 * 254.13924 * 15 14 12 23 23 C 1.47013 * 105.61676 * 179.97438 * 11 10 9 24 24 C 1.34178 * 105.95624 * 0.02562 * 23 11 10 25 25 O 1.33657 * 125.79801 * 269.69233 * 10 9 8 26 26 C 1.38735 * 119.89072 * 359.70511 * 7 6 5 27 27 C 1.38147 * 119.94145 * 359.97438 * 26 7 6 28 28 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 29 29 H 1.09000 * 109.47411 * 120.00061 * 2 1 3 30 30 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 31 31 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 32 32 H 1.08003 * 119.96765 * 359.97438 * 5 4 2 33 33 H 1.08003 * 120.02761 * 180.25084 * 6 5 4 34 34 H 1.09001 * 109.46870 * 299.99559 * 9 8 7 35 35 H 1.08995 * 109.47175 * 59.99163 * 9 8 7 36 36 H 0.97001 * 119.99795 * 0.02562 * 14 12 11 37 37 H 1.08998 * 113.61437 * 254.53132 * 17 15 14 38 38 H 1.08998 * 113.61309 * 25.43819 * 17 15 14 39 39 H 1.09006 * 109.46572 * 60.00035 * 20 18 17 40 40 H 1.08997 * 109.47204 * 180.02562 * 20 18 17 41 41 H 1.09005 * 113.61379 * 334.56620 * 22 15 14 42 42 H 1.09004 * 113.61779 * 105.46386 * 22 15 14 43 43 H 1.08004 * 127.02387 * 180.02562 * 23 11 10 44 44 H 1.08000 * 125.43559 * 180.02562 * 24 23 11 45 45 H 1.07993 * 120.03312 * 179.97438 * 26 7 6 46 46 H 1.07997 * 119.97419 * 179.97438 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7214 -0.0355 -2.1428 6 6 3.1879 -0.6861 -3.2687 7 6 2.8531 -2.0141 -3.4896 8 8 3.3053 -2.6544 -4.5997 9 6 4.1218 -1.8992 -5.4969 10 6 4.5253 -2.7674 -6.6607 11 6 3.8355 -2.9068 -7.8294 12 6 2.5688 -2.2509 -8.1998 13 8 2.0276 -1.4898 -7.4207 14 7 2.0102 -2.4944 -9.4018 15 6 0.7507 -1.8429 -9.7699 16 1 0.5902 -0.9031 -9.2414 17 6 0.5306 -1.7410 -11.2885 18 6 -0.9436 -2.0857 -11.0185 19 1 -1.5692 -1.2126 -10.8327 20 6 -1.5483 -3.0411 -12.0491 21 9 -1.4814 -2.4597 -13.3199 22 6 -0.4639 -2.7853 -9.7338 23 6 4.6197 -3.8481 -8.6419 24 6 5.6858 -4.1788 -7.8973 25 8 5.6229 -3.5274 -6.7256 26 6 2.0554 -2.6873 -2.5757 27 6 1.5970 -2.0342 -1.4480 28 1 -0.3934 0.4417 -0.7650 29 1 1.7923 -0.5138 0.8900 30 1 1.5614 2.4679 1.2086 31 1 3.5344 1.7704 -0.0321 32 1 2.9775 0.9999 -1.9728 33 1 3.8084 -0.1597 -3.9789 34 1 3.5603 -1.0396 -5.8630 35 1 5.0137 -1.5545 -4.9738 36 1 2.4417 -3.1017 -10.0231 37 1 0.6787 -0.7365 -11.6847 38 1 1.0601 -2.5044 -11.8586 39 1 -0.9899 -3.9773 -12.0481 40 1 -2.5896 -3.2385 -11.7946 41 1 -0.2068 -3.8347 -9.8781 42 1 -1.1175 -2.6226 -8.8767 43 1 4.3855 -4.2014 -9.6353 44 1 6.4718 -4.8568 -8.1955 45 1 1.7931 -3.7210 -2.7457 46 1 0.9757 -2.5576 -0.7365 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_4549634.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:51 Heat of formation + Delta-G solvation = -79.969080 kcal Electronic energy + Delta-G solvation = -31476.942807 eV Core-core repulsion = 26829.785876 eV Total energy + Delta-G solvation = -4647.156931 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.141 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -48.52565 -43.72862 -41.31887 -41.05813 -39.37423 -39.15235 -37.18852 -34.93641 -33.88208 -32.84418 -31.99484 -31.39808 -29.54202 -27.88560 -26.71911 -26.20842 -25.17717 -23.84559 -23.25979 -22.39890 -21.86677 -21.40381 -20.45862 -19.52350 -19.12085 -18.26439 -17.68569 -17.42218 -17.23500 -17.01412 -16.91508 -16.78816 -16.68692 -16.41119 -16.01776 -15.93992 -15.86841 -15.62295 -15.53692 -15.16433 -14.71704 -14.58431 -14.35440 -14.22049 -13.86618 -13.63073 -13.54640 -13.50340 -13.36548 -13.15150 -13.03216 -12.59127 -12.25598 -12.11668 -12.07446 -11.76236 -11.75479 -11.54250 -11.35920 -11.08078 -10.97493 -10.42427 -10.14282 -10.07832 -9.83241 -9.25401 -4.99825 -0.05026 0.24873 0.27423 1.02433 1.32605 1.50857 1.62416 1.95195 2.04119 2.13686 2.45515 2.62928 3.33300 3.34498 3.40658 3.54007 3.58094 3.65013 3.67708 3.70708 3.77803 3.80121 3.89622 3.93107 4.09101 4.10559 4.18503 4.26580 4.27395 4.40444 4.44897 4.49483 4.57483 4.64214 4.67578 4.70168 4.78833 4.79736 4.85654 4.93419 4.98467 5.04662 5.12261 5.21572 5.23223 5.26415 5.45588 5.51548 5.66769 5.87886 6.23878 6.44505 6.77388 7.10059 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.557 6.557 2 C -0.069 4.069 3 Si 0.773 3.227 4 C -0.160 4.160 5 C -0.076 4.076 6 C -0.205 4.205 7 C 0.124 3.876 8 O -0.322 6.322 9 C 0.135 3.865 10 C 0.039 3.961 11 C -0.223 4.223 12 C 0.584 3.416 13 O -0.571 6.571 14 N -0.697 5.697 15 C 0.118 3.882 16 H 0.099 0.901 17 C -0.129 4.129 18 C -0.140 4.140 19 H 0.103 0.897 20 C 0.067 3.933 21 F -0.236 7.236 22 C -0.136 4.136 23 C -0.196 4.196 24 C -0.013 4.013 25 O -0.179 6.179 26 C -0.163 4.163 27 C -0.058 4.058 28 H 0.394 0.606 29 H 0.107 0.893 30 H -0.298 1.298 31 H -0.284 1.284 32 H 0.150 0.850 33 H 0.148 0.852 34 H 0.110 0.890 35 H 0.099 0.901 36 H 0.415 0.585 37 H 0.077 0.923 38 H 0.103 0.897 39 H 0.092 0.908 40 H 0.087 0.913 41 H 0.101 0.899 42 H 0.071 0.929 43 H 0.193 0.807 44 H 0.252 0.748 45 H 0.133 0.867 46 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.088 -1.687 -5.786 6.379 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.179 4.179 3 Si 0.679 3.321 4 C -0.161 4.161 5 C -0.094 4.094 6 C -0.224 4.224 7 C 0.079 3.921 8 O -0.237 6.237 9 C 0.061 3.939 10 C -0.014 4.014 11 C -0.228 4.228 12 C 0.372 3.628 13 O -0.452 6.452 14 N -0.348 5.348 15 C 0.014 3.986 16 H 0.117 0.883 17 C -0.167 4.167 18 C -0.159 4.159 19 H 0.121 0.879 20 C 0.013 3.987 21 F -0.217 7.217 22 C -0.175 4.175 23 C -0.215 4.215 24 C -0.078 4.078 25 O -0.074 6.074 26 C -0.181 4.181 27 C -0.076 4.076 28 H 0.244 0.756 29 H 0.125 0.875 30 H -0.227 1.227 31 H -0.211 1.211 32 H 0.167 0.833 33 H 0.166 0.834 34 H 0.127 0.873 35 H 0.117 0.883 36 H 0.253 0.747 37 H 0.096 0.904 38 H 0.121 0.879 39 H 0.110 0.890 40 H 0.105 0.895 41 H 0.119 0.881 42 H 0.090 0.910 43 H 0.210 0.790 44 H 0.267 0.733 45 H 0.151 0.849 46 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.453 -1.081 -4.175 4.961 hybrid contribution 0.264 -0.803 -0.253 0.882 sum 2.717 -1.883 -4.427 5.525 Atomic orbital electron populations 1.86451 1.17363 1.82184 1.50458 1.25111 0.85176 1.10694 0.96881 0.93718 0.77911 0.75623 0.84845 1.20357 1.01924 0.95462 0.98350 1.21021 0.95706 0.99905 0.92745 1.21418 1.06005 0.93789 1.01170 1.19174 0.94653 0.91904 0.86340 1.86045 1.65284 1.40673 1.31691 1.21147 0.95377 0.91311 0.86104 1.22061 0.87040 0.96088 0.96168 1.21405 0.98587 1.05767 0.97060 1.17467 0.83105 0.80190 0.82007 1.90773 1.64405 1.38446 1.51533 1.45665 1.24682 1.47753 1.16697 1.22540 0.82610 0.97085 0.96393 0.88253 1.23320 0.95425 1.03757 0.94239 1.22972 0.96876 1.00161 0.95932 0.87869 1.22145 1.03658 0.95966 0.76976 1.92744 1.98066 1.87069 1.43830 1.23451 0.96761 1.00140 0.97132 1.23257 0.95355 1.00137 1.02756 1.24912 1.02141 0.98452 0.82340 1.83794 1.38651 1.46959 1.38023 1.20625 1.01191 1.01416 0.94878 1.20935 0.97015 0.93892 0.95759 0.75565 0.87549 1.22656 1.21062 0.83311 0.83448 0.87278 0.88332 0.74707 0.90400 0.87866 0.88996 0.89458 0.88087 0.91046 0.79034 0.73260 0.84908 0.84310 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.10 12.77 -148.98 -1.90 -3.01 16 2 C -0.07 -0.09 2.82 71.24 0.20 0.11 16 3 Si 0.77 -0.66 29.78 68.60 2.04 1.39 16 4 C -0.16 -0.45 5.39 -19.85 -0.11 -0.55 16 5 C -0.08 -0.12 8.66 22.26 0.19 0.07 16 6 C -0.21 -0.74 9.04 22.37 0.20 -0.54 16 7 C 0.12 0.92 6.69 22.51 0.15 1.07 16 8 O -0.32 -2.96 10.12 -92.37 -0.93 -3.89 16 9 C 0.13 0.64 4.74 71.24 0.34 0.98 16 10 C 0.04 0.19 7.00 25.26 0.18 0.37 16 11 C -0.22 -0.71 6.31 -18.99 -0.12 -0.83 16 12 C 0.58 3.10 7.81 86.65 0.68 3.78 16 13 O -0.57 -6.97 14.46 -4.10 -0.06 -7.03 16 14 N -0.70 1.12 5.36 -443.34 -2.38 -1.26 16 15 C 0.12 -0.20 4.21 45.52 0.19 -0.01 16 16 H 0.10 0.26 7.50 -2.38 -0.02 0.24 16 17 C -0.13 0.62 7.26 31.12 0.23 0.85 16 18 C -0.14 0.65 4.13 -10.21 -0.04 0.61 16 19 H 0.10 -0.42 8.14 -2.38 -0.02 -0.44 16 20 C 0.07 -0.31 7.40 71.98 0.53 0.22 16 21 F -0.24 -0.62 17.22 44.97 0.77 0.15 16 22 C -0.14 0.54 7.45 31.18 0.23 0.77 16 23 C -0.20 0.82 10.60 23.65 0.25 1.07 16 24 C -0.01 0.06 12.03 66.89 0.80 0.86 16 25 O -0.18 -0.45 10.52 4.45 0.05 -0.40 16 26 C -0.16 -1.07 9.99 22.37 0.22 -0.85 16 27 C -0.06 -0.26 9.60 22.25 0.21 -0.05 16 28 H 0.39 -2.23 8.70 -74.06 -0.64 -2.87 16 29 H 0.11 0.23 7.96 -2.39 -0.02 0.21 16 30 H -0.30 -1.93 7.11 99.48 0.71 -1.22 16 31 H -0.28 -0.96 7.11 99.48 0.71 -0.25 16 32 H 0.15 -0.49 4.87 -2.91 -0.01 -0.50 16 33 H 0.15 -0.07 6.30 -2.91 -0.02 -0.09 16 34 H 0.11 0.60 6.00 -2.39 -0.01 0.59 16 35 H 0.10 0.02 7.66 -2.39 -0.02 0.01 16 36 H 0.42 -3.14 7.88 -92.71 -0.73 -3.87 16 37 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 38 H 0.10 -0.76 8.07 -2.39 -0.02 -0.78 16 39 H 0.09 -0.74 7.95 -2.38 -0.02 -0.76 16 40 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 41 H 0.10 -0.63 7.97 -2.38 -0.02 -0.65 16 42 H 0.07 -0.13 8.14 -2.38 -0.02 -0.15 16 43 H 0.19 -2.21 7.74 -2.91 -0.02 -2.23 16 44 H 0.25 -3.41 8.06 -2.91 -0.02 -3.43 16 45 H 0.13 0.71 8.06 -2.91 -0.02 0.69 16 46 H 0.14 0.36 8.06 -2.91 -0.02 0.34 16 Total: 0.00 -23.81 390.94 1.65 -22.17 By element: Atomic # 1 Polarization: -15.78 SS G_CDS: -0.29 Total: -16.07 kcal Atomic # 6 Polarization: 3.61 SS G_CDS: 4.34 Total: 7.96 kcal Atomic # 7 Polarization: 1.12 SS G_CDS: -2.38 Total: -1.26 kcal Atomic # 8 Polarization: -11.48 SS G_CDS: -2.85 Total: -14.33 kcal Atomic # 9 Polarization: -0.62 SS G_CDS: 0.77 Total: 0.15 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: 2.04 Total: 1.39 kcal Total: -23.81 1.65 -22.17 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4549634.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.804 kcal (2) G-P(sol) polarization free energy of solvation -23.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.615 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.646 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.165 kcal (6) G-S(sol) free energy of system = (1) + (5) -79.969 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds