Wall clock time and date at job start Tue Mar 9 2021 13:10:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35994 * 117.00270 * 2 1 4 4 C 1.39160 * 120.07411 * 180.02562 * 3 2 1 5 5 O 1.35995 * 120.07044 * 359.97438 * 4 3 2 6 6 C 1.42899 * 116.99629 * 179.72710 * 5 4 3 7 7 C 1.50702 * 109.46876 * 179.97438 * 6 5 4 8 8 O 1.21283 * 120.00262 * 0.02562 * 7 6 5 9 9 N 1.34777 * 119.99928 * 179.72354 * 7 6 5 10 10 C 1.46499 * 120.00199 * 180.27479 * 9 7 6 11 11 H 1.09003 * 112.84940 * 336.20268 * 10 9 7 12 12 C 1.53783 * 113.61254 * 107.50239 * 10 9 7 13 13 C 1.53783 * 87.07930 * 139.98361 * 12 10 9 14 14 H 1.09003 * 113.69289 * 89.12994 * 13 12 10 15 15 C 1.53002 * 113.61683 * 220.01685 * 13 12 10 16 16 F 1.39905 * 109.46924 * 162.49874 * 15 13 12 17 17 C 1.53780 * 113.61714 * 205.00175 * 10 9 7 18 18 C 1.38561 * 119.85487 * 179.72485 * 4 3 2 19 19 C 1.38246 * 119.99740 * 0.27289 * 18 4 3 20 20 N 1.48005 * 119.92461 * 179.97438 * 19 18 4 21 21 O 1.21802 * 119.99908 * 0.02562 * 20 19 18 22 22 O 1.21799 * 120.00023 * 180.02562 * 20 19 18 23 23 C 1.38247 * 120.14667 * 359.97438 * 19 18 4 24 24 C 1.50708 * 119.92601 * 179.97438 * 23 19 18 25 25 O 1.42901 * 109.46650 * 74.99982 * 24 23 19 26 26 Si 1.86291 * 109.47171 * 195.00007 * 24 23 19 27 27 C 1.38236 * 120.15020 * 0.02562 * 23 19 18 28 28 H 1.09004 * 109.46654 * 300.00306 * 1 2 3 29 29 H 1.08996 * 109.47089 * 59.99327 * 1 2 3 30 30 H 1.08996 * 109.47479 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.47206 * 60.00286 * 6 5 4 32 32 H 1.08994 * 109.47548 * 299.99943 * 6 5 4 33 33 H 0.97000 * 120.00317 * 0.28382 * 9 7 6 34 34 H 1.08995 * 113.61760 * 254.52995 * 12 10 9 35 35 H 1.08998 * 113.61505 * 25.44279 * 12 10 9 36 36 H 1.08991 * 109.47262 * 282.49901 * 15 13 12 37 37 H 1.09000 * 109.46747 * 42.49972 * 15 13 12 38 38 H 1.08998 * 113.61656 * 334.56745 * 17 10 9 39 39 H 1.09003 * 113.61327 * 105.47325 * 17 10 9 40 40 H 1.08002 * 120.00357 * 180.29095 * 18 4 3 41 41 H 1.09000 * 109.47087 * 315.00556 * 24 23 19 42 42 H 0.96706 * 114.00135 * 59.99983 * 25 24 23 43 43 H 1.48506 * 109.99900 * 180.02562 * 26 24 23 44 44 H 1.48509 * 110.00077 * 301.32001 * 26 24 23 45 45 H 1.07996 * 120.00312 * 180.02562 * 27 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1795 0.1475 -0.0005 6 6 5.6003 0.3005 -0.0072 7 6 6.2518 -1.0584 -0.0055 8 8 5.5669 -2.0593 0.0003 9 7 7.5955 -1.1615 -0.0166 10 6 8.2289 -2.4825 -0.0211 11 1 7.5865 -3.2613 0.3901 12 6 8.8661 -2.8555 -1.3700 13 6 10.0273 -3.4620 -0.5645 14 1 9.8785 -4.5095 -0.3024 15 6 11.4038 -3.1923 -1.1755 16 9 12.3934 -3.4139 -0.2116 17 6 9.6516 -2.4856 0.5627 18 6 4.0604 2.5232 -0.0063 19 6 3.3030 3.6797 -0.0058 20 7 3.9716 5.0001 -0.0114 21 8 5.1878 5.0669 -0.0169 22 8 3.3057 6.0200 -0.0105 23 6 1.9226 3.6057 -0.0001 24 6 1.1018 4.8696 0.0010 25 8 1.1296 5.4567 -1.3016 26 14 -0.6574 4.4673 0.4634 27 6 1.2933 2.3748 0.0057 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5139 -0.8899 30 1 -0.3634 -1.0276 0.0005 31 1 5.9104 0.8528 0.8799 32 1 5.9027 0.8477 -0.9000 33 1 8.1434 -0.3610 -0.0215 34 1 8.2945 -3.5923 -1.9341 35 1 9.1550 -1.9926 -1.9700 36 1 11.5636 -3.8616 -2.0207 37 1 11.4537 -2.1582 -1.5164 38 1 10.1551 -1.5215 0.4910 39 1 9.7139 -2.9238 1.5588 40 1 5.1387 2.5838 -0.0115 41 1 1.5164 5.5714 0.7247 42 1 0.7749 4.8867 -1.9976 43 1 -1.4773 5.7055 0.4675 44 1 -1.2237 3.4869 -0.4976 45 1 0.2148 2.3197 0.0097 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_4549636.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:10:54 Heat of formation + Delta-G solvation = -120.636096 kcal Electronic energy + Delta-G solvation = -33735.220161 eV Core-core repulsion = 28639.961762 eV Total energy + Delta-G solvation = -5095.258400 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.135 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -48.53322 -43.38725 -42.12658 -41.28579 -40.07234 -39.33322 -39.03054 -37.72499 -37.23444 -34.86797 -32.70080 -32.55945 -30.42725 -29.06095 -28.61604 -27.91665 -26.72530 -25.85676 -24.25471 -23.47178 -23.08622 -21.78543 -20.79565 -20.77504 -19.83081 -19.54465 -18.77370 -18.65419 -18.42712 -17.77778 -17.72923 -17.57503 -17.28287 -16.91329 -16.89704 -16.68471 -16.49352 -16.20689 -15.98299 -15.80090 -15.49174 -15.37601 -14.97001 -14.73489 -14.47021 -13.98828 -13.78329 -13.50773 -13.49144 -13.35640 -13.10090 -13.06545 -12.70261 -12.60207 -12.48901 -12.48160 -12.37543 -12.24643 -12.11466 -11.81572 -11.70752 -11.52980 -11.36358 -11.02553 -10.65207 -10.48976 -10.18213 -9.50293 -5.00588 -1.35318 -0.44397 0.17296 0.31475 1.13074 1.24394 1.35884 1.45991 1.86582 1.87933 1.93370 2.34701 2.97222 3.15981 3.25258 3.33597 3.39324 3.41135 3.47144 3.50587 3.66154 3.73775 3.87098 3.93022 3.96098 4.05207 4.08931 4.10134 4.17951 4.24607 4.26601 4.31307 4.37279 4.59244 4.63367 4.68390 4.71204 4.76072 4.78323 4.82842 4.96259 5.03342 5.18860 5.27392 5.46521 5.58126 6.03702 6.38240 6.42790 6.49247 7.06079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.001 4.001 2 O -0.307 6.307 3 C 0.169 3.831 4 C 0.102 3.898 5 O -0.291 6.291 6 C 0.026 3.974 7 C 0.517 3.483 8 O -0.568 6.568 9 N -0.699 5.699 10 C 0.118 3.882 11 H 0.096 0.904 12 C -0.135 4.135 13 C -0.143 4.143 14 H 0.099 0.901 15 C 0.067 3.933 16 F -0.237 7.237 17 C -0.131 4.131 18 C -0.109 4.109 19 C -0.043 4.043 20 N 0.036 4.964 21 O -0.188 6.188 22 O -0.162 6.162 23 C -0.034 4.034 24 C -0.102 4.102 25 O -0.529 6.529 26 Si 0.775 3.225 27 C -0.172 4.172 28 H 0.089 0.911 29 H 0.074 0.926 30 H 0.122 0.878 31 H 0.129 0.871 32 H 0.128 0.872 33 H 0.422 0.578 34 H 0.070 0.930 35 H 0.107 0.893 36 H 0.086 0.914 37 H 0.095 0.905 38 H 0.107 0.893 39 H 0.075 0.925 40 H 0.184 0.816 41 H 0.128 0.872 42 H 0.383 0.617 43 H -0.295 1.295 44 H -0.249 1.249 45 H 0.187 0.813 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.715 -2.711 0.228 3.216 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 O -0.218 6.218 3 C 0.120 3.880 4 C 0.055 3.945 5 O -0.204 6.204 6 C -0.051 4.051 7 C 0.303 3.697 8 O -0.446 6.446 9 N -0.353 5.353 10 C 0.013 3.987 11 H 0.114 0.886 12 C -0.173 4.173 13 C -0.162 4.162 14 H 0.118 0.882 15 C 0.012 3.988 16 F -0.219 7.219 17 C -0.169 4.169 18 C -0.128 4.128 19 C -0.127 4.127 20 N 0.549 4.451 21 O -0.398 6.398 22 O -0.377 6.377 23 C -0.036 4.036 24 C -0.209 4.209 25 O -0.336 6.336 26 Si 0.676 3.324 27 C -0.191 4.191 28 H 0.107 0.893 29 H 0.093 0.907 30 H 0.140 0.860 31 H 0.147 0.853 32 H 0.146 0.854 33 H 0.260 0.740 34 H 0.089 0.911 35 H 0.125 0.875 36 H 0.105 0.895 37 H 0.113 0.887 38 H 0.126 0.874 39 H 0.093 0.907 40 H 0.201 0.799 41 H 0.146 0.854 42 H 0.232 0.768 43 H -0.222 1.222 44 H -0.175 1.175 45 H 0.204 0.796 Dipole moment (debyes) X Y Z Total from point charges -3.010 -3.967 0.334 4.991 hybrid contribution 0.899 0.902 -1.146 1.713 sum -2.111 -3.065 -0.812 3.810 Atomic orbital electron populations 1.23743 0.74963 1.06949 1.03740 1.86325 1.24554 1.24667 1.86294 1.18679 0.89219 0.86283 0.93812 1.17948 0.88707 0.85164 1.02714 1.86304 1.18522 1.26848 1.88715 1.22933 0.78764 0.96098 1.07338 1.20373 0.83232 0.90405 0.75731 1.90780 1.63977 1.39858 1.49945 1.45697 1.05092 1.10183 1.74287 1.22510 0.93075 0.85161 0.97911 0.88635 1.23420 0.95599 1.01738 0.96572 1.22944 0.94327 1.00838 0.98127 0.88244 1.22165 0.83524 1.04097 0.88993 1.92744 1.64829 1.96704 1.67584 1.23362 0.93693 1.00914 0.98890 1.20907 1.03030 0.88094 1.00806 1.20533 0.92666 0.81978 1.17512 1.43694 1.00818 1.03383 0.97202 1.94506 0.96499 1.94103 1.54668 1.94578 1.64450 1.25355 1.53303 1.20090 0.91011 0.97356 0.95152 1.25776 1.11681 0.93810 0.89625 1.86775 1.85280 1.45039 1.16492 0.94239 0.70187 0.79718 0.88299 1.21214 1.02214 0.88406 1.07238 0.89267 0.90707 0.85952 0.85301 0.85401 0.73966 0.91073 0.87458 0.89537 0.88722 0.87423 0.90655 0.79855 0.85395 0.76800 1.22249 1.17481 0.79630 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.00 9.81 113.37 1.11 1.12 16 2 O -0.31 -0.07 10.28 -79.62 -0.82 -0.89 16 3 C 0.17 -0.15 6.70 22.57 0.15 0.00 16 4 C 0.10 0.02 6.70 22.57 0.15 0.17 16 5 O -0.29 -0.83 9.45 -67.08 -0.63 -1.46 16 6 C 0.03 -0.13 5.22 71.24 0.37 0.24 16 7 C 0.52 0.35 7.91 87.66 0.69 1.04 16 8 O -0.57 -6.87 16.10 16.00 0.26 -6.61 16 9 N -0.70 4.16 5.35 -440.03 -2.36 1.81 16 10 C 0.12 -0.43 4.24 45.52 0.19 -0.24 16 11 H 0.10 0.17 7.46 -2.39 -0.02 0.15 16 12 C -0.13 0.81 7.43 31.12 0.23 1.04 16 13 C -0.14 0.80 4.11 -10.27 -0.04 0.75 16 14 H 0.10 -0.42 8.14 -2.39 -0.02 -0.44 16 15 C 0.07 -0.36 7.33 71.98 0.53 0.17 16 16 F -0.24 -0.59 17.30 44.97 0.78 0.19 16 17 C -0.13 0.81 7.34 31.12 0.23 1.04 16 18 C -0.11 0.14 8.54 22.35 0.19 0.33 16 19 C -0.04 -0.11 6.85 36.38 0.25 0.14 16 20 N 0.04 0.30 4.45 -46.46 -0.21 0.10 16 21 O -0.19 -1.82 18.44 18.88 0.35 -1.47 16 22 O -0.16 -1.89 14.62 25.10 0.37 -1.53 16 23 C -0.03 0.03 5.26 -19.86 -0.10 -0.07 16 24 C -0.10 0.04 1.74 71.24 0.12 0.17 16 25 O -0.53 -1.57 11.80 -129.62 -1.53 -3.10 16 26 Si 0.77 -4.48 30.24 68.60 2.07 -2.40 16 27 C -0.17 0.81 7.64 22.35 0.17 0.98 16 28 H 0.09 -1.17 7.65 -2.39 -0.02 -1.19 16 29 H 0.07 -0.83 7.67 -2.39 -0.02 -0.85 16 30 H 0.12 -1.28 8.14 -2.39 -0.02 -1.30 16 31 H 0.13 -1.42 7.66 -2.38 -0.02 -1.44 16 32 H 0.13 -1.41 7.66 -2.39 -0.02 -1.43 16 33 H 0.42 -5.59 8.73 -92.71 -0.81 -6.40 16 34 H 0.07 -0.26 8.14 -2.39 -0.02 -0.28 16 35 H 0.11 -0.99 8.03 -2.39 -0.02 -1.01 16 36 H 0.09 -0.63 8.14 -2.39 -0.02 -0.64 16 37 H 0.09 -0.88 8.05 -2.39 -0.02 -0.90 16 38 H 0.11 -1.01 8.08 -2.39 -0.02 -1.03 16 39 H 0.07 -0.33 8.14 -2.39 -0.02 -0.35 16 40 H 0.18 -1.10 5.85 -2.91 -0.02 -1.12 16 41 H 0.13 0.27 6.07 -2.39 -0.01 0.26 16 42 H 0.38 -1.77 8.70 -74.05 -0.64 -2.42 16 43 H -0.30 -0.81 7.11 99.48 0.71 -0.11 16 44 H -0.25 1.70 6.68 99.48 0.66 2.37 16 45 H 0.19 -1.87 3.09 -2.91 -0.01 -1.88 16 Total: 0.00 -30.66 384.08 2.16 -28.50 By element: Atomic # 1 Polarization: -19.65 SS G_CDS: -0.37 Total: -20.02 kcal Atomic # 6 Polarization: 2.63 SS G_CDS: 4.25 Total: 6.88 kcal Atomic # 7 Polarization: 4.47 SS G_CDS: -2.56 Total: 1.90 kcal Atomic # 8 Polarization: -13.04 SS G_CDS: -2.01 Total: -15.05 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.78 Total: 0.19 kcal Atomic # 14 Polarization: -4.48 SS G_CDS: 2.07 Total: -2.40 kcal Total: -30.66 2.16 -28.50 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4549636.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.137 kcal (2) G-P(sol) polarization free energy of solvation -30.660 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.797 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.161 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.499 kcal (6) G-S(sol) free energy of system = (1) + (5) -120.636 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds