Wall clock time and date at job start Tue Mar 9 2021 13:11:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86303 * 109.47296 * 2 1 4 4 C 1.50695 * 109.47329 * 120.00079 * 2 1 3 5 5 C 1.38244 * 119.97464 * 244.97787 * 4 2 1 6 6 C 1.38289 * 120.11625 * 179.97438 * 5 4 2 7 7 C 1.38125 * 120.05375 * 0.04238 * 6 5 4 8 8 C 1.38755 * 119.94331 * 359.97438 * 7 6 5 9 9 O 1.35898 * 120.05875 * 180.02562 * 8 7 6 10 10 C 1.42902 * 116.99694 * 359.97438 * 9 8 7 11 11 C 1.50703 * 109.47357 * 180.02562 * 10 9 8 12 12 C 1.39548 * 120.07318 * 179.72535 * 11 10 9 13 13 C 1.47843 * 120.14897 * 359.97438 * 12 11 10 14 14 O 1.21551 * 119.99587 * 0.02562 * 13 12 11 15 15 N 1.34776 * 120.00231 * 180.02562 * 13 12 11 16 16 C 1.46501 * 120.00038 * 180.02562 * 15 13 12 17 17 H 1.09005 * 112.84814 * 336.19305 * 16 15 13 18 18 C 1.53782 * 113.61830 * 107.49852 * 16 15 13 19 19 C 1.53782 * 87.08122 * 139.98095 * 18 16 15 20 20 H 1.09003 * 113.61512 * 89.11547 * 19 18 16 21 21 C 1.52994 * 113.69299 * 220.01190 * 19 18 16 22 22 F 1.39904 * 109.46993 * 277.53426 * 21 19 18 23 23 C 1.53777 * 113.61557 * 205.00027 * 16 15 13 24 24 C 1.39607 * 119.70953 * 179.74705 * 12 11 10 25 25 C 1.37931 * 119.84909 * 0.52959 * 24 12 11 26 26 C 1.38379 * 120.15038 * 359.74169 * 25 24 12 27 27 C 1.37980 * 120.06847 * 359.97438 * 11 10 9 28 28 C 1.38166 * 119.97278 * 65.00122 * 4 2 1 29 29 H 0.96701 * 113.99470 * 299.99723 * 1 2 3 30 30 H 1.09005 * 109.46877 * 240.00001 * 2 1 3 31 31 H 1.48503 * 109.99753 * 300.00458 * 3 2 1 32 32 H 1.48496 * 109.99884 * 61.31647 * 3 2 1 33 33 H 1.08000 * 119.94010 * 0.02562 * 5 4 2 34 34 H 1.07992 * 119.97564 * 180.02562 * 6 5 4 35 35 H 1.07995 * 120.03167 * 179.97438 * 7 6 5 36 36 H 1.08999 * 109.47292 * 300.00273 * 10 9 8 37 37 H 1.08998 * 109.47042 * 60.00021 * 10 9 8 38 38 H 0.96993 * 120.00246 * 0.02562 * 15 13 12 39 39 H 1.08991 * 113.61514 * 254.52989 * 18 16 15 40 40 H 1.08996 * 113.60879 * 25.43456 * 18 16 15 41 41 H 1.09000 * 109.47339 * 37.53531 * 21 19 18 42 42 H 1.09003 * 109.47386 * 157.53856 * 21 19 18 43 43 H 1.09004 * 113.61704 * 334.56763 * 23 16 15 44 44 H 1.09005 * 113.61690 * 105.46388 * 23 16 15 45 45 H 1.07996 * 120.07068 * 180.24890 * 24 12 11 46 46 H 1.08001 * 119.92739 * 179.72645 * 25 24 12 47 47 H 1.07995 * 119.85846 * 180.02562 * 26 25 24 48 48 H 1.07998 * 119.93140 * 359.95268 * 27 11 10 49 49 H 1.08002 * 120.02702 * 0.27001 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6392 -0.0118 2.1907 6 6 3.1011 -0.6607 3.3212 7 6 2.8569 -2.0093 3.4931 8 6 2.1471 -2.7128 2.5306 9 8 1.9050 -4.0396 2.6976 10 6 2.4114 -4.6465 3.8881 11 6 2.0495 -6.1094 3.8993 12 6 2.4429 -6.9190 4.9656 13 6 3.2162 -6.3453 6.0875 14 8 3.5103 -5.1659 6.0826 15 7 3.5951 -7.1300 7.1157 16 6 4.3609 -6.5614 8.2277 17 1 4.9068 -5.6601 7.9485 18 6 3.5475 -6.4144 9.5244 19 6 4.8065 -6.8807 10.2742 20 1 5.4739 -6.0661 10.5558 21 6 4.5137 -7.8363 11.4326 22 9 4.1482 -7.0992 12.5642 23 6 5.2195 -7.5945 8.9762 24 6 2.0990 -8.2720 4.9708 25 6 1.3828 -8.8023 3.9180 26 6 1.0006 -7.9952 2.8609 27 6 1.3328 -6.6523 2.8526 28 6 1.6846 -2.0595 1.3976 29 1 -0.3932 0.4417 0.7651 30 1 1.7923 -0.5139 -0.8900 31 1 1.5615 2.4679 -1.2085 32 1 1.5880 2.4585 1.2242 33 1 2.8310 1.0427 2.0581 34 1 3.6534 -0.1127 4.0701 35 1 3.2182 -2.5157 4.3759 36 1 3.4959 -4.5407 3.9170 37 1 1.9753 -4.1573 4.7591 38 1 3.3608 -8.0712 7.1195 39 1 3.2626 -5.3862 9.7469 40 1 2.7126 -7.1113 9.5974 41 1 3.6983 -8.5044 11.1553 42 1 5.4052 -8.4232 11.6537 43 1 4.8418 -8.6141 8.8994 44 1 6.2845 -7.5189 8.7561 45 1 2.3970 -8.9030 5.7950 46 1 1.1198 -9.8498 3.9185 47 1 0.4396 -8.4153 2.0392 48 1 1.0305 -6.0275 2.0251 49 1 1.1357 -2.6059 0.6449 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_4557126.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:04 Heat of formation + Delta-G solvation = -72.982993 kcal Electronic energy + Delta-G solvation = -32583.341216 eV Core-core repulsion = 27971.405656 eV Total energy + Delta-G solvation = -4611.935559 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -48.56052 -41.81542 -41.11351 -40.28783 -39.09080 -38.80166 -37.26012 -35.05004 -33.30407 -32.39982 -32.26424 -30.91316 -29.51334 -27.79413 -26.95035 -26.58911 -25.25215 -23.89180 -23.48312 -22.77222 -21.85098 -21.56452 -20.92339 -19.05411 -18.94827 -17.93673 -17.75283 -17.36554 -17.11104 -17.04838 -17.01036 -16.84134 -16.57137 -16.26515 -16.13437 -16.04758 -15.78787 -15.58008 -15.39241 -15.29846 -14.80718 -14.50500 -14.42232 -14.11539 -14.00173 -13.73033 -13.64927 -13.55380 -13.28280 -13.04824 -12.92043 -12.80549 -12.64903 -12.39777 -12.26511 -12.16997 -12.05213 -11.87487 -11.69920 -11.49986 -11.40555 -10.83829 -10.57394 -10.29177 -10.04967 -9.88471 -9.81104 -9.12974 -4.90709 -0.29971 0.20353 0.31917 0.51290 1.31998 1.64820 1.75093 1.95773 1.97942 2.16471 2.68317 2.77434 3.16027 3.21886 3.40000 3.43065 3.50976 3.56123 3.60602 3.68234 3.74851 3.89709 3.91128 3.97305 4.00643 4.06402 4.16339 4.26285 4.29246 4.32577 4.36441 4.42293 4.43606 4.44509 4.51296 4.53728 4.63086 4.65885 4.70359 4.73659 4.77580 4.85669 4.88621 5.05005 5.09087 5.11057 5.28512 5.32681 5.38408 5.41065 5.49391 5.54622 5.73039 5.80431 6.31091 6.45003 6.48954 7.03402 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.076 4.076 3 Si 0.690 3.310 4 C -0.081 4.081 5 C -0.157 4.157 6 C -0.073 4.073 7 C -0.200 4.200 8 C 0.134 3.866 9 O -0.319 6.319 10 C 0.107 3.893 11 C -0.029 4.029 12 C -0.136 4.136 13 C 0.561 3.439 14 O -0.535 6.535 15 N -0.715 5.715 16 C 0.124 3.876 17 H 0.120 0.880 18 C -0.146 4.146 19 C -0.144 4.144 20 H 0.107 0.893 21 C 0.073 3.927 22 F -0.216 7.216 23 C -0.138 4.138 24 C -0.083 4.083 25 C -0.126 4.126 26 C -0.088 4.088 27 C -0.107 4.107 28 C -0.126 4.126 29 H 0.376 0.624 30 H 0.119 0.881 31 H -0.258 1.258 32 H -0.260 1.260 33 H 0.128 0.872 34 H 0.129 0.871 35 H 0.135 0.865 36 H 0.090 0.910 37 H 0.089 0.911 38 H 0.401 0.599 39 H 0.078 0.922 40 H 0.088 0.912 41 H 0.075 0.925 42 H 0.077 0.923 43 H 0.091 0.909 44 H 0.083 0.917 45 H 0.128 0.872 46 H 0.132 0.868 47 H 0.132 0.868 48 H 0.141 0.859 49 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.803 -5.102 1.129 5.929 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.185 4.185 3 Si 0.592 3.408 4 C -0.082 4.082 5 C -0.175 4.175 6 C -0.092 4.092 7 C -0.219 4.219 8 C 0.089 3.911 9 O -0.233 6.233 10 C 0.033 3.967 11 C -0.030 4.030 12 C -0.139 4.139 13 C 0.350 3.650 14 O -0.413 6.413 15 N -0.366 5.366 16 C 0.019 3.981 17 H 0.138 0.862 18 C -0.185 4.185 19 C -0.163 4.163 20 H 0.125 0.875 21 C 0.018 3.982 22 F -0.197 7.197 23 C -0.176 4.176 24 C -0.102 4.102 25 C -0.144 4.144 26 C -0.106 4.106 27 C -0.125 4.125 28 C -0.145 4.145 29 H 0.224 0.776 30 H 0.137 0.863 31 H -0.183 1.183 32 H -0.185 1.185 33 H 0.145 0.855 34 H 0.147 0.853 35 H 0.153 0.847 36 H 0.108 0.892 37 H 0.107 0.893 38 H 0.237 0.763 39 H 0.097 0.903 40 H 0.107 0.893 41 H 0.093 0.907 42 H 0.095 0.905 43 H 0.109 0.891 44 H 0.102 0.898 45 H 0.146 0.854 46 H 0.150 0.850 47 H 0.150 0.850 48 H 0.159 0.841 49 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 2.792 -3.855 0.486 4.784 hybrid contribution -1.078 -0.794 0.934 1.632 sum 1.713 -4.648 1.420 5.153 Atomic orbital electron populations 1.86607 1.17589 1.80023 1.49270 1.25069 0.84043 1.11100 0.98318 0.94841 0.91720 0.74243 0.80023 1.20035 0.98108 0.93623 0.96411 1.20961 1.01531 0.99871 0.95137 1.20921 0.97614 0.93689 0.96928 1.21457 1.03882 0.95917 1.00650 1.18940 0.95051 0.82634 0.94472 1.85943 1.74496 1.20250 1.42623 1.21681 0.99843 0.89307 0.85901 1.19629 0.96062 0.93872 0.93475 1.19595 1.03892 0.94523 0.95939 1.18310 0.78870 0.86047 0.81808 1.90753 1.55895 1.15718 1.78968 1.45876 1.56437 1.13025 1.21253 1.22536 0.93095 0.98257 0.84169 0.86167 1.23546 0.96904 1.03158 0.94881 1.23011 0.99526 0.99841 0.93959 0.87454 1.21964 1.01411 0.92803 0.81993 1.92791 1.93576 1.79634 1.53726 1.23336 1.01195 0.98883 0.94177 1.21207 0.97087 0.93309 0.98591 1.21186 0.98677 1.00531 0.93968 1.21483 0.97437 0.93577 0.98118 1.21091 0.97592 0.95367 0.98483 1.20232 1.03342 0.93691 0.97199 0.77624 0.86300 1.18287 1.18537 0.85480 0.85261 0.84692 0.89215 0.89314 0.76279 0.90307 0.89349 0.90692 0.90460 0.89093 0.89835 0.85409 0.84986 0.84999 0.84105 0.84947 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.14 12.83 -35.23 -0.45 -1.60 16 2 C -0.08 -0.06 2.80 36.00 0.10 0.05 16 3 Si 0.69 -0.18 29.88 -169.99 -5.08 -5.26 16 4 C -0.08 -0.13 5.35 -104.65 -0.56 -0.69 16 5 C -0.16 -0.15 8.67 -39.56 -0.34 -0.49 16 6 C -0.07 -0.09 10.04 -39.60 -0.40 -0.49 16 7 C -0.20 -0.47 9.04 -39.43 -0.36 -0.82 16 8 C 0.13 0.42 6.69 -39.21 -0.26 0.16 16 9 O -0.32 -1.01 8.62 -19.42 -0.17 -1.18 16 10 C 0.11 0.26 3.38 36.01 0.12 0.38 16 11 C -0.03 -0.05 5.91 -104.23 -0.62 -0.67 16 12 C -0.14 -0.09 5.87 -104.97 -0.62 -0.71 16 13 C 0.56 0.65 7.75 -12.33 -0.10 0.56 16 14 O -0.54 -2.04 13.01 5.32 0.07 -1.97 16 15 N -0.72 1.23 5.31 -53.96 -0.29 0.94 16 16 C 0.12 -0.22 4.24 -67.12 -0.28 -0.50 16 17 H 0.12 -0.03 7.46 -51.93 -0.39 -0.41 16 18 C -0.15 0.25 7.43 -25.92 -0.19 0.06 16 19 C -0.14 0.37 4.09 -89.81 -0.37 0.00 16 20 H 0.11 -0.23 8.14 -51.93 -0.42 -0.66 16 21 C 0.07 -0.16 7.35 37.15 0.27 0.11 16 22 F -0.22 -0.39 17.36 2.25 0.04 -0.35 16 23 C -0.14 0.52 7.39 -25.92 -0.19 0.33 16 24 C -0.08 0.13 9.54 -39.18 -0.37 -0.24 16 25 C -0.13 0.21 10.03 -39.64 -0.40 -0.19 16 26 C -0.09 0.07 10.04 -39.49 -0.40 -0.33 16 27 C -0.11 -0.10 9.37 -39.64 -0.37 -0.47 16 28 C -0.13 -0.34 9.62 -39.43 -0.38 -0.72 16 29 H 0.38 -0.23 8.70 45.56 0.40 0.17 16 30 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 31 H -0.26 -0.75 7.11 56.52 0.40 -0.34 16 32 H -0.26 -0.42 7.01 56.52 0.40 -0.03 16 33 H 0.13 -0.10 4.84 -52.49 -0.25 -0.35 16 34 H 0.13 -0.10 8.06 -52.49 -0.42 -0.52 16 35 H 0.14 0.26 6.30 -52.49 -0.33 -0.07 16 36 H 0.09 0.25 6.85 -51.93 -0.36 -0.10 16 37 H 0.09 0.27 6.88 -51.93 -0.36 -0.09 16 38 H 0.40 -1.71 6.76 -40.82 -0.28 -1.98 16 39 H 0.08 -0.03 8.14 -51.93 -0.42 -0.46 16 40 H 0.09 -0.20 7.97 -51.93 -0.41 -0.61 16 41 H 0.07 -0.26 7.95 -51.93 -0.41 -0.68 16 42 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 43 H 0.09 -0.47 8.08 -51.93 -0.42 -0.89 16 44 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 45 H 0.13 -0.58 6.41 -52.49 -0.34 -0.92 16 46 H 0.13 -0.50 8.06 -52.49 -0.42 -0.93 16 47 H 0.13 -0.35 8.06 -52.49 -0.42 -0.78 16 48 H 0.14 0.12 7.00 -52.49 -0.37 -0.25 16 49 H 0.13 0.32 8.06 -52.49 -0.42 -0.10 16 LS Contribution 403.68 15.07 6.08 6.08 Total: 0.00 -7.84 403.68 -12.01 -19.85 By element: Atomic # 1 Polarization: -5.33 SS G_CDS: -6.51 Total: -11.85 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -5.71 Total: -4.67 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -0.29 Total: 0.94 kcal Atomic # 8 Polarization: -4.20 SS G_CDS: -0.55 Total: -4.75 kcal Atomic # 9 Polarization: -0.39 SS G_CDS: 0.04 Total: -0.35 kcal Atomic # 14 Polarization: -0.18 SS G_CDS: -5.08 Total: -5.26 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -7.84 -12.01 -19.85 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4557126.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.131 kcal (2) G-P(sol) polarization free energy of solvation -7.839 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.970 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.013 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.852 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.983 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds