Wall clock time and date at job start Tue Mar 9 2021 13:11:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35978 * 116.99684 * 2 1 4 4 C 1.38686 * 119.99787 * 180.02562 * 3 2 1 5 5 C 1.38154 * 119.99824 * 179.97438 * 4 3 2 6 6 C 1.50701 * 119.99441 * 179.97438 * 5 4 3 7 7 O 1.42899 * 109.46966 * 255.01759 * 6 5 4 8 8 Si 1.86296 * 109.47402 * 15.02136 * 6 5 4 9 9 C 1.38674 * 120.00247 * 359.97438 * 5 4 3 10 10 O 1.35978 * 120.00011 * 180.02562 * 9 5 4 11 11 C 1.42897 * 116.99908 * 180.02562 * 10 9 5 12 12 C 1.50705 * 109.47099 * 179.97438 * 11 10 9 13 13 O 1.21276 * 119.99998 * 0.02562 * 12 11 10 14 14 N 1.34785 * 119.99918 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99772 * 180.02562 * 14 12 11 16 16 H 1.09007 * 112.90884 * 336.25438 * 15 14 12 17 17 C 1.53777 * 113.61500 * 107.50337 * 15 14 12 18 18 C 1.53786 * 87.08052 * 139.97875 * 17 15 14 19 19 H 1.08998 * 113.68877 * 89.12868 * 18 17 15 20 20 C 1.52997 * 113.61520 * 220.02142 * 18 17 15 21 21 F 1.39905 * 109.47157 * 277.49760 * 20 18 17 22 22 C 1.53775 * 113.61166 * 205.00578 * 15 14 12 23 23 C 1.38722 * 119.99731 * 0.27127 * 9 5 4 24 24 C 1.38113 * 120.00241 * 359.45471 * 23 9 5 25 25 H 1.08998 * 109.47055 * 180.02562 * 1 2 3 26 26 H 1.08998 * 109.46883 * 299.99700 * 1 2 3 27 27 H 1.08997 * 109.47558 * 59.99894 * 1 2 3 28 28 H 1.07995 * 119.99514 * 359.97438 * 4 3 2 29 29 H 1.09004 * 109.46667 * 135.02166 * 6 5 4 30 30 H 0.96707 * 114.00300 * 300.00916 * 7 6 5 31 31 H 1.48497 * 110.00315 * 59.99994 * 8 6 5 32 32 H 1.48505 * 109.99874 * 181.31922 * 8 6 5 33 33 H 1.09000 * 109.47572 * 60.00101 * 11 10 9 34 34 H 1.09004 * 109.47317 * 299.99569 * 11 10 9 35 35 H 0.96998 * 119.99583 * 0.02562 * 14 12 11 36 36 H 1.09005 * 113.61106 * 25.43314 * 17 15 14 37 37 H 1.09001 * 113.61747 * 254.53059 * 17 15 14 38 38 H 1.09001 * 109.46832 * 157.49968 * 20 18 17 39 39 H 1.09004 * 109.47261 * 37.49949 * 20 18 17 40 40 H 1.08996 * 113.61925 * 105.47318 * 22 15 14 41 41 H 1.09003 * 113.69556 * 334.57579 * 22 15 14 42 42 H 1.07995 * 119.99731 * 179.70491 * 23 9 5 43 43 H 1.07997 * 120.00043 * 180.27344 * 24 23 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0584 2.5152 -0.0011 6 6 5.5633 2.5940 -0.0011 7 8 6.0207 2.9673 1.3002 8 14 6.2723 0.9322 -0.4555 9 6 3.3031 3.6782 -0.0016 10 8 3.9204 4.8898 -0.0027 11 6 3.0805 6.0458 -0.0026 12 6 3.9347 7.2874 -0.0032 13 8 5.1436 7.1917 -0.0041 14 7 3.3550 8.5043 -0.0038 15 6 4.1853 9.7111 -0.0049 16 1 5.1832 9.5400 0.3991 17 6 4.1848 10.4579 -1.3492 18 6 4.1368 11.7618 -0.5352 19 1 5.1206 12.1526 -0.2756 20 6 3.2145 12.8251 -1.1349 21 9 3.8932 13.5151 -2.1451 22 6 3.4827 10.9428 0.5901 23 6 1.9178 3.6056 0.0041 24 6 1.2908 2.3750 -0.0011 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3634 0.5138 -0.8899 28 1 4.0194 0.3785 -0.0005 29 1 5.8881 3.3387 -0.7278 30 1 5.6900 3.8243 1.6026 31 1 5.8041 0.5326 -1.8069 32 1 7.7560 0.9883 -0.4280 33 1 2.4518 6.0383 0.8878 34 1 2.4505 6.0374 -0.8922 35 1 2.3880 8.5807 -0.0034 36 1 3.2896 10.2824 -1.9458 37 1 5.1056 10.3325 -1.9188 38 1 2.9128 13.5255 -0.3561 39 1 2.3303 12.3447 -1.5540 40 1 3.8368 11.2088 1.5861 41 1 2.3955 10.9011 0.5246 42 1 1.3296 4.5113 0.0085 43 1 0.2123 2.3185 -0.0011 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_4974302.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:09 Heat of formation + Delta-G solvation = -137.427858 kcal Electronic energy + Delta-G solvation = -27287.203779 eV Core-core repulsion = 23022.233670 eV Total energy + Delta-G solvation = -4264.970109 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -48.55784 -41.86082 -41.18864 -40.11925 -39.29000 -38.09548 -36.93859 -34.86802 -32.82597 -31.16704 -30.05440 -28.71816 -27.92905 -26.76522 -26.60463 -24.30394 -23.14812 -22.41956 -21.73979 -20.77341 -19.55563 -18.82933 -18.47992 -18.04941 -17.65483 -17.48607 -17.34207 -16.96164 -16.75647 -16.60567 -16.14928 -15.92448 -15.80913 -15.56249 -15.49073 -15.35708 -14.94608 -14.47335 -14.20072 -14.11036 -13.69572 -13.54281 -13.49139 -13.39263 -13.05426 -12.92692 -12.53708 -12.51472 -12.31327 -12.04822 -12.02939 -11.54044 -11.45411 -11.33893 -11.30058 -11.22811 -10.97062 -10.17528 -10.10568 -8.83062 -4.94812 0.05636 0.32499 1.32247 1.38539 1.44346 1.57011 1.90362 2.34572 2.53555 2.57063 3.33087 3.38346 3.45086 3.52946 3.64260 3.70862 3.73720 3.84311 3.93247 4.06338 4.08101 4.10356 4.12473 4.20010 4.20521 4.26096 4.27157 4.44859 4.45262 4.57645 4.66337 4.69750 4.75861 4.78108 4.79737 4.95611 4.96561 5.02265 5.11468 5.19799 5.20042 5.40577 5.48691 6.12054 6.40071 6.45641 6.50196 7.09336 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.119 4.119 5 C -0.119 4.119 6 C -0.082 4.082 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.089 3.911 10 O -0.318 6.318 11 C 0.038 3.962 12 C 0.512 3.488 13 O -0.573 6.573 14 N -0.698 5.698 15 C 0.117 3.883 16 H 0.091 0.909 17 C -0.149 4.149 18 C -0.144 4.144 19 H 0.095 0.905 20 C 0.066 3.934 21 F -0.242 7.242 22 C -0.116 4.116 23 C -0.159 4.159 24 C -0.161 4.161 25 H 0.114 0.886 26 H 0.068 0.932 27 H 0.066 0.934 28 H 0.152 0.848 29 H 0.061 0.939 30 H 0.372 0.628 31 H -0.264 1.264 32 H -0.295 1.295 33 H 0.128 0.872 34 H 0.123 0.877 35 H 0.423 0.577 36 H 0.103 0.897 37 H 0.053 0.947 38 H 0.094 0.906 39 H 0.095 0.905 40 H 0.087 0.913 41 H 0.120 0.880 42 H 0.168 0.832 43 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.339 1.655 2.237 12.649 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.045 3.955 4 C -0.137 4.137 5 C -0.120 4.120 6 C -0.189 4.189 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.044 3.956 10 O -0.231 6.231 11 C -0.040 4.040 12 C 0.298 3.702 13 O -0.452 6.452 14 N -0.352 5.352 15 C 0.012 3.988 16 H 0.109 0.891 17 C -0.187 4.187 18 C -0.163 4.163 19 H 0.113 0.887 20 C 0.012 3.988 21 F -0.223 7.223 22 C -0.154 4.154 23 C -0.177 4.177 24 C -0.180 4.180 25 H 0.132 0.868 26 H 0.086 0.914 27 H 0.085 0.915 28 H 0.169 0.831 29 H 0.078 0.922 30 H 0.220 0.780 31 H -0.190 1.190 32 H -0.222 1.222 33 H 0.146 0.854 34 H 0.140 0.860 35 H 0.262 0.738 36 H 0.121 0.879 37 H 0.072 0.928 38 H 0.112 0.888 39 H 0.114 0.886 40 H 0.106 0.894 41 H 0.138 0.862 42 H 0.186 0.814 43 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -10.410 0.451 1.624 10.545 hybrid contribution -0.508 2.058 -0.565 2.193 sum -10.917 2.508 1.059 11.252 Atomic orbital electron populations 1.23356 0.76364 1.05617 1.02381 1.86088 1.23410 1.26310 1.88922 1.18981 0.91919 0.85388 0.99167 1.20183 0.92463 0.96760 1.04265 1.19451 0.95973 0.91057 1.05560 1.25517 0.92927 1.12489 0.87976 1.86661 1.74216 1.42225 1.32003 0.92228 0.76217 0.78993 0.81283 1.18800 0.91772 0.84212 1.00795 1.86086 1.35619 1.11982 1.89458 1.22737 0.92603 0.81798 1.06881 1.20624 0.88344 0.85701 0.75503 1.90772 1.16897 1.87414 1.50098 1.45658 1.11286 1.03838 1.74371 1.22469 0.96024 0.82838 0.97443 0.89084 1.23586 1.03143 0.95027 0.96988 1.22954 1.00901 0.94389 0.98072 0.88687 1.22247 0.94314 0.93979 0.88295 1.92740 1.83124 1.82061 1.64413 1.23270 1.02086 0.91650 0.98370 1.21377 0.91988 1.00060 1.04294 1.21428 1.01618 0.90907 1.04023 0.86766 0.91369 0.91534 0.83091 0.92175 0.78008 1.18967 1.22217 0.85421 0.85963 0.73845 0.87910 0.92776 0.88759 0.88641 0.89444 0.86198 0.81417 0.82052 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.63 10.50 -93.30 -0.98 -1.61 16 3 C 0.09 0.22 6.69 22.49 0.15 0.37 16 4 C -0.12 -0.52 8.59 22.36 0.19 -0.32 16 5 C -0.12 -0.72 5.27 -19.78 -0.10 -0.82 16 6 C -0.08 -0.69 2.33 71.24 0.17 -0.52 16 7 O -0.54 -5.53 12.65 -148.98 -1.89 -7.41 16 8 Si 0.81 4.52 30.17 68.60 2.07 6.59 16 9 C 0.09 0.29 6.62 22.49 0.15 0.44 16 10 O -0.32 -1.38 8.56 -74.26 -0.64 -2.02 16 11 C 0.04 -0.18 5.22 71.24 0.37 0.19 16 12 C 0.51 0.62 7.91 87.66 0.69 1.31 16 13 O -0.57 -7.72 16.10 16.02 0.26 -7.46 16 14 N -0.70 4.37 5.35 -440.04 -2.36 2.02 16 15 C 0.12 -0.40 4.24 45.51 0.19 -0.21 16 16 H 0.09 0.26 7.47 -2.38 -0.02 0.24 16 17 C -0.15 0.46 7.43 31.12 0.23 0.69 16 18 C -0.14 0.76 4.10 -10.26 -0.04 0.72 16 19 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 20 C 0.07 -0.37 7.35 71.98 0.53 0.16 16 21 F -0.24 -0.93 17.36 44.97 0.78 -0.15 16 22 C -0.12 1.09 7.39 31.12 0.23 1.32 16 23 C -0.16 0.46 9.03 22.36 0.20 0.66 16 24 C -0.16 0.37 9.03 22.35 0.20 0.58 16 25 H 0.11 -0.99 8.14 -2.39 -0.02 -1.01 16 26 H 0.07 -0.58 7.66 -2.39 -0.02 -0.60 16 27 H 0.07 -0.56 7.66 -2.39 -0.02 -0.58 16 28 H 0.15 0.25 5.13 -2.91 -0.01 0.23 16 29 H 0.06 0.67 7.82 -2.38 -0.02 0.65 16 30 H 0.37 2.83 8.60 -74.05 -0.64 2.19 16 31 H -0.26 -1.97 7.11 99.48 0.71 -1.26 16 32 H -0.29 -3.52 7.11 99.48 0.71 -2.82 16 33 H 0.13 -1.50 7.65 -2.39 -0.02 -1.52 16 34 H 0.12 -1.33 7.67 -2.38 -0.02 -1.35 16 35 H 0.42 -6.21 8.73 -92.71 -0.81 -7.02 16 36 H 0.10 -0.62 7.96 -2.38 -0.02 -0.64 16 37 H 0.05 0.10 8.14 -2.39 -0.02 0.08 16 38 H 0.09 -0.84 8.14 -2.39 -0.02 -0.86 16 39 H 0.10 -0.92 7.94 -2.38 -0.02 -0.94 16 40 H 0.09 -0.81 8.14 -2.39 -0.02 -0.83 16 41 H 0.12 -1.77 8.08 -2.39 -0.02 -1.79 16 42 H 0.17 -1.82 6.29 -2.91 -0.02 -1.84 16 43 H 0.16 -1.33 6.29 -2.91 -0.02 -1.35 16 Total: 0.00 -26.96 361.59 1.18 -25.78 By element: Atomic # 1 Polarization: -20.95 SS G_CDS: -0.35 Total: -21.30 kcal Atomic # 6 Polarization: 1.29 SS G_CDS: 4.28 Total: 5.56 kcal Atomic # 7 Polarization: 4.37 SS G_CDS: -2.36 Total: 2.02 kcal Atomic # 8 Polarization: -15.26 SS G_CDS: -3.24 Total: -18.50 kcal Atomic # 9 Polarization: -0.93 SS G_CDS: 0.78 Total: -0.15 kcal Atomic # 14 Polarization: 4.52 SS G_CDS: 2.07 Total: 6.59 kcal Total: -26.96 1.18 -25.78 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_4974302.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -111.650 kcal (2) G-P(sol) polarization free energy of solvation -26.956 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -138.606 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.178 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.778 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.428 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds