Wall clock time and date at job start Tue Mar 9 2021 13:11:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37633 * 125.67253 * 2 1 4 4 C 1.46671 * 126.23083 * 359.97438 * 3 2 1 5 5 O 1.21695 * 119.99567 * 5.45516 * 4 3 2 6 6 N 1.34774 * 120.00299 * 185.44943 * 4 3 2 7 7 C 1.46507 * 120.00012 * 185.14072 * 6 4 3 8 8 H 1.08993 * 112.84707 * 25.34086 * 7 6 4 9 9 C 1.53777 * 113.61289 * 156.53182 * 7 6 4 10 10 C 1.53777 * 87.08224 * 139.98222 * 9 7 6 11 11 H 1.09001 * 113.61777 * 89.19837 * 10 9 7 12 12 C 1.53000 * 113.61911 * 220.02141 * 10 9 7 13 13 F 1.39894 * 109.47312 * 184.99935 * 12 10 9 14 14 C 1.53777 * 113.61252 * 254.13968 * 7 6 4 15 15 C 1.37886 * 107.54979 * 179.97438 * 3 2 1 16 16 C 1.39888 * 107.09076 * 359.76972 * 15 3 2 17 17 Br 1.89097 * 126.07538 * 180.23950 * 16 15 3 18 18 C 1.35509 * 107.84728 * 0.37617 * 16 15 3 19 19 C 1.50697 * 125.56806 * 179.87659 * 18 16 15 20 20 O 1.42893 * 109.47095 * 149.69379 * 19 18 16 21 21 Si 1.86306 * 109.47071 * 29.69629 * 19 18 16 22 22 H 1.08998 * 109.47266 * 265.36273 * 1 2 3 23 23 H 1.09003 * 109.47230 * 25.36502 * 1 2 3 24 24 H 1.09004 * 109.47251 * 145.36978 * 1 2 3 25 25 H 0.97002 * 120.00156 * 5.15102 * 6 4 3 26 26 H 1.08999 * 113.61733 * 254.53023 * 9 7 6 27 27 H 1.09002 * 113.61640 * 25.43826 * 9 7 6 28 28 H 1.09004 * 109.46818 * 305.00022 * 12 10 9 29 29 H 1.09000 * 109.47055 * 64.99377 * 12 10 9 30 30 H 1.08993 * 113.62236 * 334.56863 * 14 7 6 31 31 H 1.09000 * 113.61473 * 105.47517 * 14 7 6 32 32 H 1.07999 * 126.45889 * 180.02562 * 15 3 2 33 33 H 1.09001 * 109.47611 * 269.70088 * 19 18 16 34 34 H 0.96705 * 114.00144 * 179.97438 * 20 19 18 35 35 H 1.48504 * 109.99955 * 60.00062 * 21 19 18 36 36 H 1.48496 * 109.99882 * 181.31569 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2676 1.1181 0.0000 4 6 1.8120 2.5122 -0.0005 5 8 0.6257 2.7647 0.0992 6 7 2.7071 3.5137 -0.1113 7 6 2.2660 4.9063 0.0011 8 1 1.3517 5.0148 0.5844 9 6 3.3839 5.8744 0.4224 10 6 2.7953 6.8706 -0.5905 11 1 2.0261 7.5181 -0.1696 12 6 3.8558 7.6423 -1.3784 13 9 3.2321 8.5986 -2.1867 14 6 2.2313 5.6518 -1.3434 15 6 3.5781 0.6892 0.0006 16 6 3.5529 -0.7095 0.0063 17 35 5.0609 -1.8503 0.0160 18 6 2.2558 -1.1015 0.0006 19 6 1.7713 -2.5285 0.0012 20 8 0.5134 -2.6042 0.6748 21 14 3.0121 -3.6052 0.8800 22 1 -0.3634 -0.0831 1.0243 23 1 -0.3634 0.9286 -0.4402 24 1 -0.3634 -0.8456 -0.5840 25 1 3.6434 3.3125 -0.2656 26 1 3.3064 6.2071 1.4575 27 1 4.3837 5.5268 0.1623 28 1 4.5337 8.1394 -0.6845 29 1 4.4194 6.9498 -2.0036 30 1 2.9152 5.2432 -2.0872 31 1 1.2244 5.8051 -1.7318 32 1 4.4582 1.3151 0.0011 33 1 1.6546 -2.8731 -1.0263 34 1 0.1407 -3.4957 0.7131 35 1 3.1803 -3.1458 2.2821 36 1 2.5613 -5.0199 0.8597 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_5000100.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:14 Heat of formation + Delta-G solvation = -46.772430 kcal Electronic energy + Delta-G solvation = -22415.688072 eV Core-core repulsion = 18670.533306 eV Total energy + Delta-G solvation = -3745.154765 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.032 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -48.51781 -42.88470 -40.95828 -39.24281 -37.93392 -35.19140 -34.41713 -32.45775 -31.27163 -29.42674 -27.40739 -27.01174 -26.71482 -23.99659 -22.79269 -21.53769 -21.01856 -20.29130 -18.83446 -18.58643 -17.67712 -17.29065 -16.96461 -16.90474 -16.71324 -16.22195 -15.92540 -15.74182 -15.33735 -14.99930 -14.72625 -14.61161 -14.29468 -14.03417 -13.86918 -13.59468 -13.43894 -13.21034 -12.97442 -12.86135 -12.79609 -12.45613 -12.04964 -12.00796 -11.58694 -11.48812 -11.29333 -11.11583 -10.82930 -10.19161 -9.88676 -9.31531 -4.69644 0.13327 0.33853 0.88616 1.23623 1.41245 1.57282 1.94384 2.10342 2.27581 2.92393 3.37194 3.42467 3.45161 3.52801 3.68344 3.75720 3.79460 4.13278 4.13941 4.19372 4.25795 4.29437 4.30995 4.38395 4.58696 4.61744 4.63603 4.72456 4.79474 4.83315 4.99851 5.06257 5.23554 5.25394 5.51814 5.60898 5.77264 6.39839 6.42418 7.03918 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.080 3.920 2 N -0.392 5.392 3 C -0.063 4.063 4 C 0.590 3.410 5 O -0.581 6.581 6 N -0.690 5.690 7 C 0.120 3.880 8 H 0.096 0.904 9 C -0.118 4.118 10 C -0.141 4.141 11 H 0.097 0.903 12 C 0.066 3.934 13 F -0.242 7.242 14 C -0.147 4.147 15 C -0.087 4.087 16 C -0.195 4.195 17 Br 0.095 6.905 18 C 0.094 3.906 19 C -0.044 4.044 20 O -0.558 6.558 21 Si 0.621 3.379 22 H 0.073 0.927 23 H 0.091 0.909 24 H 0.102 0.898 25 H 0.420 0.580 26 H 0.089 0.911 27 H 0.118 0.882 28 H 0.095 0.905 29 H 0.094 0.906 30 H 0.101 0.899 31 H 0.057 0.943 32 H 0.193 0.807 33 H 0.112 0.888 34 H 0.402 0.598 35 H -0.297 1.297 36 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.913 -0.800 -1.800 6.233 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.063 5.063 3 C -0.177 4.177 4 C 0.378 3.622 5 O -0.462 6.462 6 N -0.341 5.341 7 C 0.015 3.985 8 H 0.114 0.886 9 C -0.156 4.156 10 C -0.161 4.161 11 H 0.115 0.885 12 C 0.011 3.989 13 F -0.223 7.223 14 C -0.186 4.186 15 C -0.113 4.113 16 C -0.280 4.280 17 Br 0.179 6.821 18 C -0.029 4.029 19 C -0.154 4.154 20 O -0.368 6.368 21 Si 0.523 3.477 22 H 0.092 0.908 23 H 0.110 0.890 24 H 0.121 0.879 25 H 0.259 0.741 26 H 0.107 0.893 27 H 0.137 0.863 28 H 0.113 0.887 29 H 0.112 0.888 30 H 0.119 0.881 31 H 0.076 0.924 32 H 0.210 0.790 33 H 0.129 0.871 34 H 0.254 0.746 35 H -0.224 1.224 36 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges 5.446 -0.878 -1.002 5.606 hybrid contribution -1.726 -0.269 0.248 1.764 sum 3.720 -1.147 -0.753 3.965 Atomic orbital electron populations 1.22285 0.74454 1.05099 1.04229 1.43925 1.07817 1.04081 1.50500 1.20225 0.90497 0.87749 1.19206 1.17049 0.85503 0.83898 0.75731 1.90803 1.17811 1.85143 1.52453 1.45509 1.11641 1.04871 1.72057 1.22539 0.99573 0.78381 0.97965 0.88640 1.23293 0.98932 0.93275 1.00064 1.22977 0.99260 0.95880 0.97962 0.88472 1.22254 0.94409 0.89261 0.92956 1.92736 1.85411 1.67719 1.76453 1.23619 1.02077 0.95597 0.97294 1.21522 0.95564 0.92366 1.01882 1.20628 0.90313 0.95138 1.21954 1.96293 1.32302 1.56177 1.97340 1.20062 0.89443 0.88480 1.04864 1.24328 0.93539 0.94598 1.02954 1.86454 1.34372 1.36434 1.79545 0.92937 0.93620 0.77973 0.83214 0.90794 0.89004 0.87948 0.74129 0.89273 0.86342 0.88706 0.88783 0.88097 0.92393 0.78950 0.87069 0.74580 1.22373 1.17728 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.37 9.27 127.77 1.18 1.55 16 2 N -0.39 -2.18 3.16 -519.61 -1.64 -3.82 16 3 C -0.06 -0.23 6.88 40.35 0.28 0.05 16 4 C 0.59 2.77 7.77 86.45 0.67 3.44 16 5 O -0.58 -7.18 14.30 -4.33 -0.06 -7.24 16 6 N -0.69 2.17 5.33 -444.01 -2.37 -0.20 16 7 C 0.12 -0.34 4.18 45.51 0.19 -0.15 16 8 H 0.10 0.20 7.57 -2.39 -0.02 0.19 16 9 C -0.12 1.03 7.39 31.12 0.23 1.26 16 10 C -0.14 0.74 4.10 -10.21 -0.04 0.70 16 11 H 0.10 -0.31 8.14 -2.39 -0.02 -0.33 16 12 C 0.07 -0.35 7.39 71.98 0.53 0.19 16 13 F -0.24 -0.95 17.36 44.97 0.78 -0.17 16 14 C -0.15 0.43 7.45 31.18 0.23 0.66 16 15 C -0.09 0.12 10.33 22.59 0.23 0.35 16 16 C -0.20 -0.20 6.16 22.04 0.14 -0.06 16 17 Br 0.10 -0.24 28.22 -20.37 -0.57 -0.81 16 18 C 0.09 0.35 6.19 41.35 0.26 0.61 16 19 C -0.04 -0.03 2.89 71.23 0.21 0.18 16 20 O -0.56 -0.57 10.47 -148.98 -1.56 -2.13 16 21 Si 0.62 1.55 27.08 68.60 1.86 3.40 16 22 H 0.07 0.44 8.14 -2.39 -0.02 0.42 16 23 H 0.09 0.63 6.18 -2.39 -0.01 0.61 16 24 H 0.10 0.14 7.11 -2.39 -0.02 0.13 16 25 H 0.42 -4.20 7.66 -92.71 -0.71 -4.91 16 26 H 0.09 -0.80 8.14 -2.39 -0.02 -0.82 16 27 H 0.12 -1.61 8.07 -2.39 -0.02 -1.63 16 28 H 0.09 -0.82 8.14 -2.38 -0.02 -0.84 16 29 H 0.09 -0.83 7.85 -2.39 -0.02 -0.85 16 30 H 0.10 -0.53 7.90 -2.39 -0.02 -0.55 16 31 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 32 H 0.19 -1.84 7.49 -2.91 -0.02 -1.86 16 33 H 0.11 -0.45 7.96 -2.39 -0.02 -0.47 16 34 H 0.40 -2.73 8.74 -74.05 -0.65 -3.37 16 35 H -0.30 -3.36 7.11 99.48 0.71 -2.66 16 36 H -0.25 -1.26 7.11 99.48 0.71 -0.55 16 Total: 0.00 -19.96 317.38 0.35 -19.61 By element: Atomic # 1 Polarization: -17.23 SS G_CDS: -0.19 Total: -17.42 kcal Atomic # 6 Polarization: 4.67 SS G_CDS: 4.11 Total: 8.78 kcal Atomic # 7 Polarization: 0.00 SS G_CDS: -4.01 Total: -4.02 kcal Atomic # 8 Polarization: -7.75 SS G_CDS: -1.62 Total: -9.37 kcal Atomic # 9 Polarization: -0.95 SS G_CDS: 0.78 Total: -0.17 kcal Atomic # 14 Polarization: 1.55 SS G_CDS: 1.86 Total: 3.40 kcal Atomic # 35 Polarization: -0.24 SS G_CDS: -0.57 Total: -0.81 kcal Total: -19.96 0.35 -19.61 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_5000100.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -27.163 kcal (2) G-P(sol) polarization free energy of solvation -19.957 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.121 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.348 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.609 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.772 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds