Wall clock time and date at job start Tue Mar 9 2021 13:11:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42906 * 1 3 3 C 1.35963 * 117.00026 * 2 1 4 4 C 1.39447 * 120.12291 * 179.97438 * 3 2 1 5 5 O 1.34775 * 133.24357 * 0.02562 * 4 3 2 6 6 C 1.34932 * 110.84209 * 179.97438 * 5 4 3 7 7 C 1.46996 * 125.13846 * 180.02562 * 6 5 4 8 8 O 1.21649 * 119.99787 * 179.97438 * 7 6 5 9 9 N 1.34773 * 119.99786 * 359.97206 * 7 6 5 10 10 C 1.46501 * 119.99569 * 179.97438 * 9 7 6 11 11 H 1.08997 * 112.85261 * 23.81164 * 10 9 7 12 12 C 1.53789 * 113.61057 * 155.00110 * 10 9 7 13 13 C 1.53789 * 87.07896 * 139.98437 * 12 10 9 14 14 H 1.09000 * 113.61256 * 89.19870 * 13 12 10 15 15 C 1.52993 * 113.61451 * 220.02113 * 13 12 10 16 16 F 1.39910 * 109.47010 * 299.99715 * 15 13 12 17 17 C 1.53777 * 87.08116 * 334.56849 * 13 12 10 18 18 C 1.35806 * 109.71947 * 0.02562 * 6 5 4 19 19 C 1.40608 * 119.13598 * 179.97438 * 4 3 2 20 20 C 1.39770 * 120.12268 * 0.04562 * 19 4 3 21 21 C 1.50699 * 120.09544 * 180.02562 * 20 19 4 22 22 O 1.42903 * 109.47152 * 75.00325 * 21 20 19 23 23 Si 1.86305 * 109.47184 * 194.99797 * 21 20 19 24 24 C 1.36630 * 119.81465 * 0.27558 * 20 19 4 25 25 C 1.38263 * 120.12190 * 359.97036 * 3 2 1 26 26 H 1.08999 * 109.47116 * 179.97438 * 1 2 3 27 27 H 1.08991 * 109.47103 * 300.00712 * 1 2 3 28 28 H 1.09007 * 109.46474 * 60.00508 * 1 2 3 29 29 H 0.96995 * 120.00668 * 0.02562 * 9 7 6 30 30 H 1.09000 * 113.61554 * 254.52859 * 12 10 9 31 31 H 1.08993 * 113.61721 * 25.35481 * 12 10 9 32 32 H 1.08995 * 109.47594 * 59.99560 * 15 13 12 33 33 H 1.08998 * 109.47187 * 179.97438 * 15 13 12 34 34 H 1.08999 * 113.62006 * 270.88735 * 17 13 12 35 35 H 1.09006 * 113.61585 * 139.97984 * 17 13 12 36 36 H 1.08005 * 126.95615 * 180.02562 * 18 6 5 37 37 H 1.08997 * 109.47198 * 315.00003 * 21 20 19 38 38 H 0.96700 * 114.00311 * 180.02562 * 22 21 20 39 39 H 1.48497 * 110.00233 * 300.00062 * 23 21 20 40 40 H 1.48492 * 109.99800 * 61.32455 * 23 21 20 41 41 H 1.07998 * 119.75938 * 179.72150 * 24 20 19 42 42 H 1.08004 * 119.65939 * 0.02736 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4387 1.2874 0.0005 5 8 4.4142 0.3574 0.0007 6 6 5.6318 0.9388 0.0007 7 6 6.9132 0.2186 0.0003 8 8 7.9596 0.8390 -0.0001 9 7 6.9288 -1.1291 0.0004 10 6 8.2059 -1.8468 -0.0005 11 1 9.0255 -1.2530 0.4043 12 6 8.1177 -3.2619 0.5952 13 6 9.0656 -3.7095 -0.5300 14 1 10.1210 -3.6267 -0.2705 15 6 8.7060 -5.0705 -1.1291 16 9 8.7544 -6.0478 -0.1290 17 6 8.5344 -2.5182 -1.3445 18 6 5.4945 2.2899 0.0012 19 6 4.0554 2.5510 0.0000 20 6 3.2766 3.7116 -0.0001 21 6 3.9381 5.0656 -0.0013 22 8 4.4596 5.3399 -1.3032 23 14 2.6867 6.3687 0.4533 24 6 1.9137 3.6152 0.0060 25 6 1.2958 2.3726 -0.0006 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5139 0.8898 28 1 -0.3632 0.5138 -0.8901 29 1 6.0945 -1.6238 0.0004 30 1 8.5528 -3.3442 1.5912 31 1 7.1225 -3.7017 0.5303 32 1 7.7006 -5.0290 -1.5481 33 1 9.4173 -5.3203 -1.9164 34 1 7.6534 -2.7551 -1.9409 35 1 9.3058 -2.0001 -1.9143 36 1 6.2874 3.0232 0.0009 37 1 4.7510 5.0735 0.7248 38 1 4.9009 6.1971 -1.3777 39 1 1.5731 6.3683 -0.5291 40 1 2.1602 6.1130 1.8180 41 1 1.3128 4.5125 0.0104 42 1 0.2174 2.3120 -0.0007 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15744752_6672420.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:27 Heat of formation + Delta-G solvation = -88.448226 kcal Electronic energy + Delta-G solvation = -28520.444865 eV Core-core repulsion = 24156.684010 eV Total energy + Delta-G solvation = -4363.760855 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.125 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -48.52285 -43.67954 -41.23611 -40.62106 -39.34753 -38.98388 -37.10425 -34.84999 -33.59031 -32.02901 -31.11561 -29.59607 -28.65278 -26.86350 -26.35166 -25.44964 -23.99593 -23.21872 -21.83869 -21.62972 -20.97871 -19.65444 -18.84582 -18.48780 -18.45216 -17.75922 -17.64133 -17.10436 -17.00929 -16.77823 -16.63829 -16.37902 -16.14606 -15.85301 -15.54621 -15.47029 -15.18297 -14.67043 -14.45650 -14.26941 -14.01918 -13.99210 -13.66835 -13.52265 -13.37874 -13.18485 -13.09834 -12.74422 -12.64078 -12.45372 -12.10462 -11.91655 -11.90727 -11.67508 -11.50219 -11.29119 -10.95445 -10.34797 -10.24625 -9.78858 -9.01061 -5.03287 -0.60602 0.08860 0.69279 1.19635 1.27989 1.58544 1.89080 1.93121 2.02983 2.03626 2.35773 3.15738 3.22163 3.27143 3.35195 3.50825 3.52476 3.63183 3.66173 3.80541 3.90661 3.96870 3.97500 4.02707 4.05942 4.07282 4.13107 4.13586 4.32530 4.42820 4.43462 4.51539 4.54060 4.64177 4.70940 4.80508 4.82890 4.84874 4.90505 5.04047 5.06987 5.21051 5.26520 5.36960 5.61582 6.13012 6.31745 6.60135 6.91241 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.048 3.952 5 O -0.173 6.173 6 C -0.025 4.025 7 C 0.605 3.395 8 O -0.509 6.509 9 N -0.707 5.707 10 C 0.121 3.879 11 H 0.123 0.877 12 C -0.137 4.137 13 C -0.144 4.144 14 H 0.107 0.893 15 C 0.073 3.927 16 F -0.216 7.216 17 C -0.143 4.143 18 C -0.101 4.101 19 C -0.082 4.082 20 C -0.051 4.051 21 C -0.071 4.071 22 O -0.543 6.543 23 Si 0.686 3.314 24 C -0.097 4.097 25 C -0.177 4.177 26 H 0.107 0.893 27 H 0.060 0.940 28 H 0.060 0.940 29 H 0.409 0.591 30 H 0.083 0.917 31 H 0.091 0.909 32 H 0.075 0.925 33 H 0.077 0.923 34 H 0.091 0.909 35 H 0.082 0.918 36 H 0.175 0.825 37 H 0.075 0.925 38 H 0.383 0.617 39 H -0.249 1.249 40 H -0.253 1.253 41 H 0.133 0.867 42 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.636 2.216 -0.221 3.451 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.001 4.001 5 O -0.075 6.075 6 C -0.075 4.075 7 C 0.390 3.610 8 O -0.386 6.386 9 N -0.357 5.357 10 C 0.017 3.983 11 H 0.141 0.859 12 C -0.176 4.176 13 C -0.163 4.163 14 H 0.125 0.875 15 C 0.018 3.982 16 F -0.197 7.197 17 C -0.182 4.182 18 C -0.122 4.122 19 C -0.083 4.083 20 C -0.052 4.052 21 C -0.181 4.181 22 O -0.349 6.349 23 Si 0.587 3.413 24 C -0.114 4.114 25 C -0.196 4.196 26 H 0.125 0.875 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.245 0.755 30 H 0.101 0.899 31 H 0.109 0.891 32 H 0.093 0.907 33 H 0.096 0.904 34 H 0.109 0.891 35 H 0.100 0.900 36 H 0.192 0.808 37 H 0.093 0.907 38 H 0.231 0.769 39 H -0.174 1.174 40 H -0.178 1.178 41 H 0.151 0.849 42 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -2.927 1.699 -0.080 3.385 hybrid contribution -0.556 -0.654 0.007 0.858 sum -3.483 1.045 -0.073 3.637 Atomic orbital electron populations 1.23199 0.77291 1.04811 1.01793 1.86171 1.22181 1.25543 1.88377 1.17693 0.86509 0.85811 0.99469 1.18730 0.87426 0.86899 1.07004 1.84048 1.12640 1.34641 1.76138 1.21986 0.83924 0.92604 1.08997 1.16639 0.85357 0.82271 0.76737 1.90912 1.30308 1.67465 1.49874 1.45905 1.10211 1.05627 1.73988 1.22651 0.86653 0.91786 0.97206 0.85917 1.23356 1.00600 0.94255 0.99342 1.23000 1.01221 0.94116 0.97997 0.87462 1.21940 1.03123 0.84822 0.88363 1.92788 1.98066 1.64667 1.64174 1.23473 1.02006 0.95655 0.97030 1.22711 0.94565 0.94351 1.00538 1.19395 0.92794 0.91960 1.04148 1.18439 0.92233 0.92351 1.02161 1.24662 1.05125 0.99239 0.89074 1.86522 1.77909 1.41987 1.28476 0.95128 0.79526 0.86702 0.79935 1.20415 0.93498 0.97448 1.00066 1.20929 1.00394 0.90429 1.07833 0.87510 0.92119 0.92100 0.75505 0.89861 0.89056 0.90682 0.90430 0.89087 0.89959 0.80756 0.90700 0.76949 1.17366 1.17759 0.84926 0.83444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.72 10.50 -19.62 -0.21 -0.93 16 3 C 0.15 0.46 6.70 -39.12 -0.26 0.20 16 4 C 0.05 0.21 7.35 -38.24 -0.28 -0.08 16 5 O -0.17 -0.68 10.28 2.65 0.03 -0.65 16 6 C -0.02 -0.09 7.07 -36.91 -0.26 -0.35 16 7 C 0.60 1.92 7.80 -12.71 -0.10 1.82 16 8 O -0.51 -2.93 16.42 5.23 0.09 -2.84 16 9 N -0.71 -0.32 5.35 -54.22 -0.29 -0.61 16 10 C 0.12 -0.06 4.24 -67.11 -0.28 -0.35 16 11 H 0.12 0.07 7.46 -51.93 -0.39 -0.32 16 12 C -0.14 0.21 7.26 -25.91 -0.19 0.02 16 13 C -0.14 0.26 4.13 -89.81 -0.37 -0.11 16 14 H 0.11 -0.22 8.14 -51.93 -0.42 -0.64 16 15 C 0.07 -0.10 7.40 37.15 0.28 0.17 16 16 F -0.22 -0.44 17.22 2.25 0.04 -0.40 16 17 C -0.14 0.24 7.43 -25.92 -0.19 0.04 16 18 C -0.10 -0.34 10.68 -37.23 -0.40 -0.74 16 19 C -0.08 -0.32 6.16 -105.21 -0.65 -0.97 16 20 C -0.05 -0.15 5.30 -104.63 -0.55 -0.70 16 21 C -0.07 -0.02 2.70 36.01 0.10 0.08 16 22 O -0.54 -0.27 12.86 -35.23 -0.45 -0.72 16 23 Si 0.69 -0.96 30.19 -169.99 -5.13 -6.09 16 24 C -0.10 -0.20 8.62 -39.96 -0.34 -0.55 16 25 C -0.18 -0.25 9.03 -39.37 -0.36 -0.60 16 26 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 27 H 0.06 -0.18 7.66 -51.93 -0.40 -0.58 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.57 16 29 H 0.41 -0.42 8.44 -40.82 -0.34 -0.76 16 30 H 0.08 -0.10 8.14 -51.93 -0.42 -0.53 16 31 H 0.09 -0.18 8.08 -51.93 -0.42 -0.59 16 32 H 0.07 -0.20 7.94 -51.93 -0.41 -0.61 16 33 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 34 H 0.09 -0.19 7.96 -51.93 -0.41 -0.61 16 35 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 36 H 0.18 0.36 8.06 -52.48 -0.42 -0.06 16 37 H 0.08 -0.08 7.96 -51.93 -0.41 -0.50 16 38 H 0.38 -1.78 8.74 45.56 0.40 -1.38 16 39 H -0.25 -0.27 6.76 56.52 0.38 0.11 16 40 H -0.25 -0.27 7.11 56.52 0.40 0.13 16 41 H 0.13 0.12 4.84 -52.49 -0.25 -0.14 16 42 H 0.15 -0.22 6.26 -52.48 -0.33 -0.55 16 LS Contribution 360.15 15.07 5.43 5.43 Total: 0.00 -9.00 360.15 -8.50 -17.51 By element: Atomic # 1 Polarization: -4.41 SS G_CDS: -5.12 Total: -9.54 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -2.88 Total: -1.16 kcal Atomic # 7 Polarization: -0.32 SS G_CDS: -0.29 Total: -0.61 kcal Atomic # 8 Polarization: -4.59 SS G_CDS: -0.55 Total: -5.14 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.13 Total: -6.09 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -9.00 -8.50 -17.51 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_6672420.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -70.942 kcal (2) G-P(sol) polarization free energy of solvation -9.004 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -79.946 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.502 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.507 kcal (6) G-S(sol) free energy of system = (1) + (5) -88.448 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds