Wall clock time and date at job start Tue Mar 9 2021 13:11:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50707 * 109.46442 * 119.99698 * 2 1 3 5 5 C 1.32766 * 124.71308 * 65.00254 * 4 2 1 6 6 C 1.44426 * 113.08460 * 179.97438 * 5 4 2 7 7 C 1.47182 * 123.46001 * 179.97438 * 6 5 4 8 8 O 1.21637 * 120.00507 * 0.02562 * 7 6 5 9 9 N 1.34786 * 119.99969 * 180.02562 * 7 6 5 10 10 C 1.46500 * 120.00054 * 180.02562 * 9 7 6 11 11 H 1.08995 * 112.84718 * 334.66612 * 10 9 7 12 12 C 1.53773 * 113.61422 * 105.86445 * 10 9 7 13 13 C 1.53953 * 87.01982 * 139.95023 * 12 10 9 14 14 H 1.09003 * 113.54001 * 89.18433 * 13 12 10 15 15 C 1.53005 * 113.74496 * 220.05753 * 13 12 10 16 16 F 1.39898 * 109.47127 * 162.59503 * 15 13 12 17 17 C 1.53778 * 113.61011 * 203.47099 * 10 9 7 18 18 C 1.36010 * 113.07449 * 359.97438 * 6 5 4 19 19 S 1.70446 * 110.81996 * 359.72924 * 18 6 5 20 20 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 21 21 H 1.08999 * 109.47293 * 239.99660 * 2 1 3 22 22 H 1.48501 * 109.99918 * 178.67685 * 3 2 1 23 23 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 24 24 H 1.08000 * 123.45717 * 0.02562 * 5 4 2 25 25 H 0.96998 * 119.99726 * 0.02562 * 9 7 6 26 26 H 1.08998 * 113.61396 * 254.52247 * 12 10 9 27 27 H 1.08994 * 113.61814 * 25.43221 * 12 10 9 28 28 H 1.09003 * 109.46592 * 282.59586 * 15 13 12 29 29 H 1.08993 * 109.47105 * 42.59093 * 15 13 12 30 30 H 1.08996 * 113.62053 * 334.56666 * 17 10 9 31 31 H 1.09004 * 113.61581 * 105.47219 * 17 10 9 32 32 H 1.08002 * 124.58620 * 180.02562 * 18 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 1.7483 -2.0003 1.4865 6 6 2.3362 -2.4182 2.7378 7 6 2.2692 -3.7983 3.2450 8 8 1.6962 -4.6561 2.6004 9 7 2.8427 -4.1116 4.4238 10 6 2.7764 -5.4854 4.9284 11 1 1.9203 -6.0377 4.5411 12 6 4.1060 -6.2491 4.8121 13 6 3.7951 -6.8404 6.1991 14 1 3.2183 -7.7644 6.1591 15 6 5.0177 -6.9423 7.1135 16 9 4.5972 -7.1023 8.4382 17 6 2.9378 -5.5895 6.4541 18 6 2.9581 -1.4055 3.3992 19 16 2.8470 0.0505 2.5200 20 1 -0.3934 0.4418 0.7650 21 1 1.7924 -0.5139 -0.8899 22 1 3.5346 1.7702 0.0322 23 1 1.5616 2.4678 -1.2086 24 1 1.2154 -2.6686 0.8264 25 1 3.2993 -3.4275 4.9380 26 1 4.1154 -6.9901 4.0128 27 1 4.9823 -5.6011 4.8002 28 1 5.6219 -7.8001 6.8179 29 1 5.6120 -6.0327 7.0282 30 1 3.4940 -4.7608 6.8921 31 1 2.0054 -5.7988 6.9786 32 1 3.4590 -1.5108 4.3502 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_6894386.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:32 Heat of formation + Delta-G solvation = -63.044826 kcal Electronic energy + Delta-G solvation = -18070.588260 eV Core-core repulsion = 14846.435509 eV Total energy + Delta-G solvation = -3224.152751 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 272.067 amu Computer time = 0.36 seconds Orbital eigenvalues (eV) -48.53509 -41.34782 -39.69578 -38.65927 -37.10192 -34.83457 -31.80369 -29.40434 -26.96362 -26.73947 -25.97322 -23.36265 -21.96819 -21.10394 -20.25853 -18.94364 -18.16911 -17.75822 -17.34656 -16.90744 -16.72569 -16.38765 -16.06255 -15.92204 -15.66400 -15.39690 -14.90799 -14.44168 -14.13099 -13.78072 -13.68133 -13.50448 -13.29545 -13.07763 -12.72310 -12.53681 -12.30092 -11.95157 -11.79260 -11.53223 -11.36431 -11.01498 -10.58733 -10.21274 -9.99834 -9.43938 -5.13998 -0.34768 0.38879 0.68821 0.80714 1.22122 1.60325 1.90461 2.08796 2.22556 3.32927 3.38404 3.40145 3.63141 3.65818 3.74475 3.88625 3.96616 4.10203 4.17824 4.24666 4.29110 4.40191 4.63886 4.66834 4.70117 4.77309 4.82933 4.95866 4.99021 5.03105 5.15692 5.21135 5.50450 6.44629 6.68384 7.12305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.039 4.039 3 Si 0.744 3.256 4 C -0.250 4.250 5 C -0.078 4.078 6 C -0.185 4.185 7 C 0.575 3.425 8 O -0.587 6.587 9 N -0.700 5.700 10 C 0.116 3.884 11 H 0.093 0.907 12 C -0.135 4.135 13 C -0.141 4.141 14 H 0.100 0.900 15 C 0.068 3.932 16 F -0.236 7.236 17 C -0.129 4.129 18 C -0.188 4.188 19 S 0.255 5.745 20 H 0.397 0.603 21 H 0.113 0.887 22 H -0.255 1.255 23 H -0.274 1.274 24 H 0.129 0.871 25 H 0.416 0.584 26 H 0.069 0.931 27 H 0.105 0.895 28 H 0.087 0.913 29 H 0.095 0.905 30 H 0.107 0.893 31 H 0.076 0.924 32 H 0.206 0.794 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.977 5.720 4.566 8.329 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.151 4.151 3 Si 0.645 3.355 4 C -0.366 4.366 5 C -0.107 4.107 6 C -0.203 4.203 7 C 0.362 3.638 8 O -0.468 6.468 9 N -0.351 5.351 10 C 0.011 3.989 11 H 0.111 0.889 12 C -0.174 4.174 13 C -0.160 4.160 14 H 0.118 0.882 15 C 0.013 3.987 16 F -0.218 7.218 17 C -0.167 4.167 18 C -0.327 4.327 19 S 0.522 5.478 20 H 0.247 0.753 21 H 0.130 0.870 22 H -0.181 1.181 23 H -0.200 1.200 24 H 0.147 0.853 25 H 0.254 0.746 26 H 0.088 0.912 27 H 0.123 0.877 28 H 0.105 0.895 29 H 0.113 0.887 30 H 0.126 0.874 31 H 0.095 0.905 32 H 0.223 0.777 Dipole moment (debyes) X Y Z Total from point charges 4.652 6.867 3.443 8.981 hybrid contribution -0.569 -2.312 -0.400 2.415 sum 4.082 4.555 3.043 6.832 Atomic orbital electron populations 1.86506 1.17013 1.82230 1.50370 1.24721 0.85184 1.10401 0.94770 0.94177 0.79373 0.74104 0.87839 1.24905 1.09576 0.98248 1.03917 1.20986 0.98965 0.95046 0.95722 1.20094 1.08135 0.94026 0.98067 1.17986 0.77430 0.87261 0.81107 1.90790 1.45701 1.51283 1.59040 1.45703 1.56522 1.11928 1.20922 1.22517 0.99018 0.82371 0.95029 0.88874 1.23441 0.98197 0.99623 0.96120 1.22963 0.97700 0.99358 0.96007 0.88218 1.22141 0.96170 1.04776 0.75564 1.92743 1.92240 1.97463 1.39306 1.23342 1.01122 0.98304 0.93910 1.26193 1.02847 0.97889 1.05744 1.82860 1.48245 1.07953 1.08746 0.75289 0.87002 1.18051 1.19967 0.85284 0.74608 0.91213 0.87662 0.89498 0.88713 0.87421 0.90547 0.77701 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.53 12.88 -148.98 -1.92 -2.45 16 2 C -0.04 0.02 2.94 71.24 0.21 0.23 16 3 Si 0.74 -2.93 30.92 68.60 2.12 -0.80 16 4 C -0.25 0.05 5.66 24.51 0.14 0.18 16 5 C -0.08 -0.39 9.95 22.67 0.23 -0.16 16 6 C -0.19 -0.45 5.98 -19.87 -0.12 -0.57 16 7 C 0.57 3.69 7.79 86.59 0.67 4.36 16 8 O -0.59 -9.59 16.41 -4.15 -0.07 -9.66 16 9 N -0.70 1.09 5.33 -443.54 -2.36 -1.27 16 10 C 0.12 -0.10 4.21 45.51 0.19 0.09 16 11 H 0.09 0.44 7.50 -2.39 -0.02 0.42 16 12 C -0.14 0.51 7.45 31.18 0.23 0.74 16 13 C -0.14 0.60 4.10 -10.21 -0.04 0.56 16 14 H 0.10 -0.30 8.14 -2.39 -0.02 -0.32 16 15 C 0.07 -0.32 7.34 71.98 0.53 0.21 16 16 F -0.24 -0.66 17.30 44.97 0.78 0.12 16 17 C -0.13 0.60 7.34 31.12 0.23 0.83 16 18 C -0.19 1.03 10.38 67.30 0.70 1.73 16 19 S 0.26 -1.58 20.20 -56.49 -1.14 -2.72 16 20 H 0.40 -3.03 8.70 -74.06 -0.64 -3.67 16 21 H 0.11 0.12 7.96 -2.39 -0.02 0.10 16 22 H -0.26 0.24 7.11 99.48 0.71 0.95 16 23 H -0.27 -0.81 7.11 99.48 0.71 -0.10 16 24 H 0.13 1.21 8.06 -2.91 -0.02 1.19 16 25 H 0.42 -3.70 7.21 -92.71 -0.67 -4.37 16 26 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 27 H 0.11 -0.73 8.05 -2.39 -0.02 -0.75 16 28 H 0.09 -0.57 8.14 -2.39 -0.02 -0.59 16 29 H 0.09 -0.82 8.06 -2.39 -0.02 -0.84 16 30 H 0.11 -0.88 8.07 -2.39 -0.02 -0.90 16 31 H 0.08 -0.24 8.14 -2.38 -0.02 -0.26 16 32 H 0.21 -2.74 7.01 -2.91 -0.02 -2.76 16 Total: 0.00 -20.86 293.58 0.26 -20.60 By element: Atomic # 1 Polarization: -11.89 SS G_CDS: -0.11 Total: -12.01 kcal Atomic # 6 Polarization: 5.23 SS G_CDS: 2.97 Total: 8.20 kcal Atomic # 7 Polarization: 1.09 SS G_CDS: -2.36 Total: -1.27 kcal Atomic # 8 Polarization: -10.12 SS G_CDS: -1.99 Total: -12.11 kcal Atomic # 9 Polarization: -0.66 SS G_CDS: 0.78 Total: 0.12 kcal Atomic # 14 Polarization: -2.93 SS G_CDS: 2.12 Total: -0.80 kcal Atomic # 16 Polarization: -1.58 SS G_CDS: -1.14 Total: -2.72 kcal Total: -20.86 0.26 -20.60 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_6894386.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -42.444 kcal (2) G-P(sol) polarization free energy of solvation -20.860 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.304 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.259 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.601 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.045 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.36 seconds