Wall clock time and date at job start Tue Mar 9 2021 13:11:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37928 * 120.07613 * 2 1 4 4 C 1.38387 * 120.14736 * 179.72087 * 3 2 1 5 5 C 1.50699 * 119.85746 * 180.25605 * 4 3 2 6 6 C 1.38336 * 120.28811 * 0.55681 * 4 3 2 7 7 C 1.50703 * 119.92848 * 179.74771 * 6 4 3 8 8 O 1.42905 * 109.46754 * 284.97669 * 7 6 4 9 9 Si 1.86303 * 109.47244 * 164.97667 * 7 6 4 10 10 C 1.37984 * 120.14743 * 359.72362 * 6 4 3 11 11 C 1.39553 * 119.85036 * 359.97438 * 10 6 4 12 12 C 1.47841 * 120.14654 * 179.97438 * 11 10 6 13 13 O 1.21553 * 120.00348 * 173.82271 * 12 11 10 14 14 N 1.34782 * 119.99850 * 353.82895 * 12 11 10 15 15 C 1.46496 * 120.00272 * 179.97438 * 14 12 11 16 16 H 1.09008 * 112.84640 * 23.80146 * 15 14 12 17 17 C 1.53778 * 113.61870 * 154.99510 * 15 14 12 18 18 C 1.53782 * 87.07933 * 139.97908 * 17 15 14 19 19 H 1.08996 * 113.61168 * 89.12510 * 18 17 15 20 20 C 1.53005 * 113.61307 * 219.93296 * 18 17 15 21 21 F 1.39895 * 109.47449 * 300.00515 * 20 18 17 22 22 C 1.53773 * 87.08336 * 334.57095 * 18 17 15 23 23 H 1.08994 * 109.47003 * 262.87685 * 1 2 3 24 24 H 1.08999 * 109.47399 * 142.86962 * 1 2 3 25 25 H 1.09000 * 109.46990 * 22.87504 * 1 2 3 26 26 H 1.08005 * 119.92691 * 359.97438 * 3 2 1 27 27 H 1.08997 * 109.46881 * 270.29906 * 5 4 3 28 28 H 1.09001 * 109.47015 * 30.29735 * 5 4 3 29 29 H 1.08999 * 109.47331 * 150.29882 * 5 4 3 30 30 H 1.08995 * 109.47078 * 44.97477 * 7 6 4 31 31 H 0.96699 * 113.99970 * 300.00108 * 8 7 6 32 32 H 1.48500 * 110.00007 * 58.67882 * 9 7 6 33 33 H 1.48496 * 109.99465 * 179.97438 * 9 7 6 34 34 H 1.07997 * 120.07233 * 180.02562 * 10 6 4 35 35 H 0.97004 * 119.99672 * 359.97438 * 14 12 11 36 36 H 1.08993 * 113.62087 * 254.53512 * 17 15 14 37 37 H 1.09006 * 113.60757 * 25.35353 * 17 15 14 38 38 H 1.09005 * 109.46729 * 60.01129 * 20 18 17 39 39 H 1.09007 * 109.46887 * 180.02562 * 20 18 17 40 40 H 1.09004 * 113.61537 * 270.87891 * 22 18 17 41 41 H 1.09000 * 113.61131 * 139.98096 * 22 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1936 0.0000 4 6 3.5821 1.1953 0.0058 5 6 4.3307 2.5032 0.0116 6 6 4.2813 0.0017 0.0001 7 6 5.7883 0.0130 0.0007 8 8 6.2624 0.3714 -1.2989 9 14 6.4219 -1.6809 0.4478 10 6 3.6020 -1.1994 -0.0058 11 6 2.2065 -1.2081 -0.0053 12 6 1.4720 -2.4912 -0.0121 13 8 0.2619 -2.4994 0.1015 14 7 2.1444 -3.6518 -0.1442 15 6 1.4168 -4.9233 -0.1504 16 1 0.3754 -4.8135 -0.4533 17 6 2.1565 -6.0529 -0.8863 18 6 1.6782 -6.9901 0.2352 19 1 0.7080 -7.4464 0.0387 20 6 2.7338 -8.0057 0.6771 21 9 3.0943 -8.8072 -0.4114 22 6 1.6028 -5.7458 1.1355 23 1 -0.3633 -0.1274 1.0197 24 1 -0.3634 -0.8193 -0.6203 25 1 -0.3633 0.9469 -0.3995 26 1 1.6583 2.1290 -0.0004 27 1 4.5108 2.8232 -1.0146 28 1 3.7389 3.2583 0.5291 29 1 5.2837 2.3741 0.5246 30 1 6.1458 0.7390 0.7309 31 1 5.9819 -0.2324 -2.0002 32 1 5.9153 -2.6849 -0.5221 33 1 7.9069 -1.6830 0.4512 34 1 4.1491 -2.1305 -0.0098 35 1 3.1101 -3.6452 -0.2352 36 1 1.7332 -6.2886 -1.8626 37 1 3.2381 -5.9204 -0.9147 38 1 3.6130 -7.4782 1.0470 39 1 2.3254 -8.6325 1.4699 40 1 2.5331 -5.5301 1.6611 41 1 0.7323 -5.7336 1.7914 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_9599494.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:37 Heat of formation + Delta-G solvation = -67.666550 kcal Electronic energy + Delta-G solvation = -23806.616917 eV Core-core repulsion = 20182.036269 eV Total energy + Delta-G solvation = -3624.580648 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.142 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -48.53001 -41.78106 -40.53826 -39.27595 -37.70657 -35.12813 -34.42016 -33.15067 -29.84705 -29.08272 -28.33299 -26.71096 -25.66383 -24.16372 -23.54001 -21.95163 -21.37423 -20.53113 -19.04752 -17.83505 -17.56020 -17.11273 -16.79502 -16.70461 -16.46557 -16.33487 -16.06244 -15.88320 -15.56964 -15.44448 -14.83844 -14.60662 -14.49166 -14.05002 -13.94317 -13.51919 -13.49795 -13.26824 -13.10468 -13.06883 -12.90808 -12.69355 -12.53726 -12.51055 -11.93244 -11.78390 -11.72213 -11.53646 -11.31833 -10.69514 -10.57850 -10.16787 -9.90588 -9.61764 -4.94654 -0.25787 0.16298 1.27588 1.52319 1.71124 1.94248 2.06483 2.63206 3.35118 3.39090 3.40585 3.47950 3.60955 3.65073 3.69913 3.78211 3.81791 4.08397 4.14962 4.19452 4.20863 4.28484 4.48662 4.51562 4.60025 4.65662 4.67943 4.69217 4.76414 4.78282 4.81889 4.85615 4.90722 4.97507 5.04672 5.05352 5.13102 5.20922 5.28954 5.48342 5.50420 5.54263 5.80554 6.42517 6.48248 7.11838 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.025 4.025 3 C -0.137 4.137 4 C -0.029 4.029 5 C -0.120 4.120 6 C -0.134 4.134 7 C -0.080 4.080 8 O -0.542 6.542 9 Si 0.752 3.248 10 C -0.073 4.073 11 C -0.159 4.159 12 C 0.557 3.443 13 O -0.562 6.562 14 N -0.708 5.708 15 C 0.117 3.883 16 H 0.100 0.900 17 C -0.135 4.135 18 C -0.140 4.140 19 H 0.102 0.898 20 C 0.066 3.934 21 F -0.237 7.237 22 C -0.133 4.133 23 H 0.072 0.928 24 H 0.076 0.924 25 H 0.072 0.928 26 H 0.145 0.855 27 H 0.076 0.924 28 H 0.079 0.921 29 H 0.078 0.922 30 H 0.127 0.873 31 H 0.385 0.615 32 H -0.264 1.264 33 H -0.301 1.301 34 H 0.146 0.854 35 H 0.410 0.590 36 H 0.073 0.927 37 H 0.100 0.900 38 H 0.094 0.906 39 H 0.089 0.911 40 H 0.106 0.894 41 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.478 0.297 3.072 3.958 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.026 4.026 3 C -0.154 4.154 4 C -0.029 4.029 5 C -0.176 4.176 6 C -0.134 4.134 7 C -0.189 4.189 8 O -0.350 6.350 9 Si 0.657 3.343 10 C -0.091 4.091 11 C -0.162 4.162 12 C 0.347 3.653 13 O -0.443 6.443 14 N -0.359 5.359 15 C 0.012 3.988 16 H 0.118 0.882 17 C -0.173 4.173 18 C -0.160 4.160 19 H 0.120 0.880 20 C 0.011 3.989 21 F -0.219 7.219 22 C -0.172 4.172 23 H 0.090 0.910 24 H 0.094 0.906 25 H 0.091 0.909 26 H 0.163 0.837 27 H 0.095 0.905 28 H 0.098 0.902 29 H 0.097 0.903 30 H 0.145 0.855 31 H 0.234 0.766 32 H -0.190 1.190 33 H -0.229 1.229 34 H 0.163 0.837 35 H 0.247 0.753 36 H 0.092 0.908 37 H 0.118 0.882 38 H 0.112 0.888 39 H 0.107 0.893 40 H 0.125 0.875 41 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 2.359 0.054 3.198 3.974 hybrid contribution 0.101 0.148 -1.414 1.425 sum 2.460 0.203 1.784 3.046 Atomic orbital electron populations 1.21016 0.90173 1.03071 1.03167 1.20218 0.96945 0.91994 0.93433 1.21196 0.93732 0.97980 1.02527 1.20221 0.93407 0.95937 0.93370 1.20942 1.00452 0.93010 1.03220 1.20088 0.96421 0.92628 1.04291 1.25180 0.91146 1.14221 0.88323 1.86596 1.76347 1.55107 1.16970 0.94268 0.77574 0.73505 0.88962 1.21307 0.92570 0.98432 0.96812 1.19672 0.93782 0.92812 1.09976 1.18488 0.86815 0.84441 0.75586 1.90734 1.15079 1.87537 1.50905 1.45875 1.11152 1.05168 1.73685 1.22544 0.97384 0.80919 0.97938 0.88192 1.23354 1.01585 0.93860 0.98536 1.22940 1.00351 0.94718 0.97945 0.87958 1.22177 0.98962 0.91872 0.85843 1.92739 1.93523 1.76473 1.59140 1.23423 1.04108 0.93174 0.96450 0.90991 0.90575 0.90891 0.83718 0.90521 0.90243 0.90337 0.85489 0.76567 1.19009 1.22894 0.83703 0.75279 0.90774 0.88199 0.88819 0.89269 0.87547 0.90601 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.53 8.72 71.24 0.62 0.09 16 2 C -0.02 -0.09 5.91 -19.61 -0.12 -0.21 16 3 C -0.14 -0.10 9.31 22.23 0.21 0.10 16 4 C -0.03 0.01 5.89 -19.81 -0.12 -0.10 16 5 C -0.12 0.36 9.53 71.24 0.68 1.04 16 6 C -0.13 0.24 5.26 -19.90 -0.10 0.14 16 7 C -0.08 0.28 2.04 71.24 0.15 0.43 16 8 O -0.54 0.36 12.80 -148.98 -1.91 -1.55 16 9 Si 0.75 -4.02 30.24 68.60 2.07 -1.95 16 10 C -0.07 0.14 8.13 22.53 0.18 0.33 16 11 C -0.16 -0.44 5.87 -20.09 -0.12 -0.56 16 12 C 0.56 2.69 7.70 86.78 0.67 3.36 16 13 O -0.56 -6.44 12.95 -3.88 -0.05 -6.49 16 14 N -0.71 0.87 5.30 -442.91 -2.35 -1.48 16 15 C 0.12 -0.18 4.24 45.52 0.19 0.02 16 16 H 0.10 0.28 7.46 -2.38 -0.02 0.27 16 17 C -0.14 0.52 7.26 31.12 0.23 0.75 16 18 C -0.14 0.65 4.13 -10.27 -0.04 0.61 16 19 H 0.10 -0.41 8.14 -2.39 -0.02 -0.42 16 20 C 0.07 -0.32 7.41 71.98 0.53 0.22 16 21 F -0.24 -0.72 17.22 44.97 0.77 0.05 16 22 C -0.13 0.66 7.43 31.12 0.23 0.89 16 23 H 0.07 0.38 8.14 -2.39 -0.02 0.36 16 24 H 0.08 0.66 5.88 -2.39 -0.01 0.65 16 25 H 0.07 0.07 8.04 -2.39 -0.02 0.06 16 26 H 0.15 -0.36 8.05 -2.91 -0.02 -0.38 16 27 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 28 H 0.08 -0.39 8.08 -2.39 -0.02 -0.41 16 29 H 0.08 -0.30 6.22 -2.39 -0.01 -0.32 16 30 H 0.13 -0.64 6.48 -2.39 -0.02 -0.66 16 31 H 0.39 -2.25 8.70 -74.06 -0.64 -2.90 16 32 H -0.26 1.19 6.68 99.48 0.66 1.85 16 33 H -0.30 -0.88 7.11 99.48 0.71 -0.17 16 34 H 0.15 -0.97 3.25 -2.91 -0.01 -0.98 16 35 H 0.41 -2.55 6.80 -92.71 -0.63 -3.18 16 36 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 37 H 0.10 -0.60 8.08 -2.38 -0.02 -0.62 16 38 H 0.09 -0.79 7.95 -2.38 -0.02 -0.81 16 39 H 0.09 -0.63 8.14 -2.38 -0.02 -0.65 16 40 H 0.11 -0.85 7.97 -2.38 -0.02 -0.87 16 41 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 Total: 0.00 -15.68 332.93 1.52 -14.16 By element: Atomic # 1 Polarization: -9.63 SS G_CDS: -0.21 Total: -9.84 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: 3.19 Total: 7.10 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -2.35 Total: -1.48 kcal Atomic # 8 Polarization: -6.08 SS G_CDS: -1.96 Total: -8.04 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.77 Total: 0.05 kcal Atomic # 14 Polarization: -4.02 SS G_CDS: 2.07 Total: -1.95 kcal Total: -15.68 1.52 -14.16 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_9599494.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.511 kcal (2) G-P(sol) polarization free energy of solvation -15.676 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -69.188 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.521 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.155 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.667 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds