Wall clock time and date at job start Tue Mar 9 2021 13:11:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86297 * 109.47298 * 2 1 4 4 C 1.50702 * 109.46790 * 240.00136 * 2 1 3 5 5 C 1.34241 * 126.49899 * 104.97896 * 4 2 1 6 6 N 1.36831 * 109.93895 * 180.02562 * 5 4 2 7 7 C 1.46500 * 125.06417 * 179.97438 * 6 5 4 8 8 C 1.50703 * 109.47025 * 265.02514 * 7 6 5 9 9 O 1.21278 * 120.00152 * 359.97438 * 8 7 6 10 10 N 1.34773 * 120.00031 * 180.02562 * 8 7 6 11 11 C 1.46497 * 120.00221 * 179.97438 * 10 8 7 12 12 H 1.08996 * 112.84765 * 23.80278 * 11 10 8 13 13 C 1.53781 * 113.61630 * 154.99518 * 11 10 8 14 14 C 1.53781 * 87.08070 * 139.98148 * 13 11 10 15 15 H 1.09002 * 113.61445 * 89.11830 * 14 13 11 16 16 C 1.53003 * 113.61337 * 219.93686 * 14 13 11 17 17 F 1.39906 * 109.46995 * 183.46911 * 16 14 13 18 18 C 1.53786 * 87.17350 * 334.52830 * 14 13 11 19 19 C 1.37699 * 109.87169 * 0.22646 * 6 5 4 20 20 C 1.39087 * 133.50679 * 180.39959 * 19 6 5 21 21 C 1.37784 * 119.77762 * 179.64793 * 20 19 6 22 22 C 1.38789 * 120.66600 * 359.75306 * 21 20 19 23 23 C 1.36667 * 120.52620 * 359.97438 * 22 21 20 24 24 C 1.39590 * 119.76807 * 0.02562 * 23 22 21 25 25 H 0.96709 * 114.00015 * 299.99847 * 1 2 3 26 26 H 1.08999 * 109.47567 * 120.00596 * 2 1 3 27 27 H 1.48504 * 110.00235 * 178.68286 * 3 2 1 28 28 H 1.48496 * 110.00398 * 300.00350 * 3 2 1 29 29 H 1.08006 * 125.02833 * 0.02562 * 5 4 2 30 30 H 1.09003 * 109.47277 * 145.02236 * 7 6 5 31 31 H 1.08995 * 109.47010 * 25.02537 * 7 6 5 32 32 H 0.97001 * 119.99917 * 359.97438 * 10 8 7 33 33 H 1.08999 * 113.61181 * 25.43203 * 13 11 10 34 34 H 1.08998 * 113.61680 * 254.52755 * 13 11 10 35 35 H 1.09000 * 109.47107 * 303.47037 * 16 14 13 36 36 H 1.08997 * 109.47112 * 63.47187 * 16 14 13 37 37 H 1.08992 * 113.61675 * 140.02412 * 18 14 13 38 38 H 1.09000 * 113.60973 * 270.92699 * 18 14 13 39 39 H 1.08000 * 120.11131 * 359.39737 * 20 19 6 40 40 H 1.08001 * 119.66847 * 179.77362 * 21 20 19 41 41 H 1.07999 * 119.73702 * 179.97438 * 22 21 20 42 42 H 1.08006 * 120.11333 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.4603 -0.1375 -2.3232 6 7 2.8018 -1.0988 -3.2351 7 6 3.4056 -0.8401 -4.5446 8 6 2.3250 -0.7833 -5.5935 9 8 1.1649 -0.9437 -5.2784 10 7 2.6480 -0.5554 -6.8820 11 6 1.5976 -0.5007 -7.9018 12 1 0.6211 -0.2457 -7.4903 13 6 1.9814 0.3303 -9.1375 14 6 1.2863 -0.7503 -9.9826 15 1 0.2240 -0.5645 -10.1408 16 6 2.0295 -1.0887 -11.2765 17 9 1.2858 -2.0177 -12.0121 18 6 1.5759 -1.7285 -8.8319 19 6 2.4883 -2.3452 -2.7409 20 6 2.6275 -3.6360 -3.2400 21 6 2.2136 -4.7106 -2.4834 22 6 1.6630 -4.5193 -1.2239 23 6 1.5221 -3.2600 -0.7118 24 6 1.9347 -2.1570 -1.4611 25 1 -0.3934 0.4417 0.7651 26 1 1.7923 -0.5139 0.8899 27 1 3.5346 1.7702 0.0321 28 1 1.5615 2.4679 -1.2084 29 1 2.5962 0.9249 -2.4620 30 1 4.1053 -1.6402 -4.7866 31 1 3.9367 0.1113 -4.5182 32 1 3.5759 -0.4275 -7.1341 33 1 3.0566 0.3915 -9.3057 34 1 1.4892 1.3018 -9.1805 35 1 2.1637 -0.1819 -11.8662 36 1 3.0042 -1.5129 -11.0353 37 1 0.7566 -2.4179 -8.6282 38 1 2.5405 -2.2291 -8.9167 39 1 3.0547 -3.7952 -4.2191 40 1 2.3192 -5.7118 -2.8742 41 1 1.3432 -5.3723 -0.6438 42 1 1.0923 -3.1189 0.2690 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15744752_9818708.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:40 Heat of formation + Delta-G solvation = -22.395630 kcal Electronic energy + Delta-G solvation = -26309.421780 eV Core-core repulsion = 22364.926034 eV Total energy + Delta-G solvation = -3944.495746 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.137 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -48.58565 -42.65634 -41.18897 -39.50947 -38.11251 -37.61147 -34.95607 -34.20175 -31.59103 -30.38986 -29.83317 -28.65433 -26.82029 -25.86822 -24.12034 -23.56257 -22.58987 -21.78528 -20.86427 -20.61008 -18.58812 -18.38407 -18.30504 -17.83015 -17.43606 -16.97398 -16.82522 -16.54456 -16.41785 -16.02889 -15.76483 -15.61523 -15.28574 -15.01703 -14.86587 -14.80169 -14.47983 -14.19685 -13.82869 -13.64138 -13.54001 -13.29723 -12.97615 -12.77741 -12.66454 -12.56897 -12.52205 -12.11030 -12.05222 -11.82242 -11.57555 -11.38105 -11.18347 -10.64778 -10.22168 -10.18274 -9.27379 -8.74942 -4.96045 0.02660 0.55423 1.23391 1.30894 1.33263 1.56907 1.69824 1.97823 2.08373 2.86346 3.29044 3.33590 3.43422 3.46451 3.54942 3.63078 3.64057 3.70106 3.81121 3.96570 3.98798 4.05523 4.16492 4.17335 4.21155 4.22857 4.33575 4.50225 4.52282 4.60272 4.61914 4.69582 4.70559 4.73541 4.82475 4.91138 4.96794 5.05802 5.16077 5.42725 5.43551 5.57074 5.63855 5.64732 6.03498 6.13908 6.36651 6.98576 7.03197 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.571 6.571 2 C -0.053 4.053 3 Si 0.790 3.210 4 C -0.180 4.180 5 C 0.052 3.948 6 N -0.468 5.468 7 C 0.086 3.914 8 C 0.490 3.510 9 O -0.575 6.575 10 N -0.698 5.698 11 C 0.115 3.885 12 H 0.085 0.915 13 C -0.116 4.116 14 C -0.143 4.143 15 H 0.093 0.907 16 C 0.067 3.933 17 F -0.241 7.241 18 C -0.146 4.146 19 C 0.090 3.910 20 C -0.137 4.137 21 C -0.102 4.102 22 C -0.151 4.151 23 C -0.082 4.082 24 C -0.121 4.121 25 H 0.398 0.602 26 H 0.080 0.920 27 H -0.281 1.281 28 H -0.294 1.294 29 H 0.176 0.824 30 H 0.149 0.851 31 H 0.157 0.843 32 H 0.423 0.577 33 H 0.120 0.880 34 H 0.085 0.915 35 H 0.095 0.905 36 H 0.096 0.904 37 H 0.052 0.948 38 H 0.104 0.896 39 H 0.133 0.867 40 H 0.150 0.850 41 H 0.144 0.856 42 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.249 4.064 -0.243 8.314 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.381 6.381 2 C -0.162 4.162 3 Si 0.693 3.307 4 C -0.188 4.188 5 C -0.073 4.073 6 N -0.151 5.151 7 C -0.038 4.038 8 C 0.275 3.725 9 O -0.453 6.453 10 N -0.351 5.351 11 C 0.010 3.990 12 H 0.104 0.896 13 C -0.154 4.154 14 C -0.162 4.162 15 H 0.112 0.888 16 C 0.012 3.988 17 F -0.223 7.223 18 C -0.185 4.185 19 C -0.015 4.015 20 C -0.157 4.157 21 C -0.121 4.121 22 C -0.170 4.170 23 C -0.101 4.101 24 C -0.125 4.125 25 H 0.249 0.751 26 H 0.097 0.903 27 H -0.208 1.208 28 H -0.222 1.222 29 H 0.193 0.807 30 H 0.167 0.833 31 H 0.175 0.825 32 H 0.262 0.738 33 H 0.138 0.862 34 H 0.104 0.896 35 H 0.113 0.887 36 H 0.114 0.886 37 H 0.071 0.929 38 H 0.123 0.877 39 H 0.151 0.849 40 H 0.168 0.832 41 H 0.162 0.838 42 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 7.132 4.293 -1.297 8.425 hybrid contribution -0.154 -0.659 -0.478 0.829 sum 6.978 3.635 -1.775 8.066 Atomic orbital electron populations 1.86515 1.18211 1.82419 1.50916 1.24355 0.85053 1.11190 0.95553 0.94112 0.77452 0.73950 0.85154 1.20058 1.09106 0.91902 0.97715 1.21724 1.01951 0.94303 0.89311 1.43393 1.53513 1.03920 1.14284 1.22007 0.93989 1.08996 0.78808 1.21479 0.90339 0.75919 0.84732 1.90812 1.22571 1.50116 1.81828 1.45775 1.11690 1.71943 1.05688 1.22494 0.92234 0.97712 0.86544 0.89636 1.23267 1.03123 0.97588 0.91400 1.22950 1.01340 0.98147 0.93795 0.88845 1.22246 0.94114 0.91623 0.90778 1.92742 1.80098 1.69762 1.79680 1.23617 1.03013 0.96809 0.95033 1.18484 1.01793 0.86905 0.94306 1.20263 1.05397 0.88875 1.01191 1.21196 0.97636 0.98997 0.94295 1.20986 1.02025 0.97111 0.96902 1.20507 0.98442 0.91330 0.99788 1.19373 1.04353 0.93552 0.95191 0.75120 0.90254 1.20757 1.22187 0.80749 0.83302 0.82502 0.73841 0.86156 0.89643 0.88701 0.88617 0.92878 0.87741 0.84891 0.83233 0.83813 0.85378 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -3.60 12.86 -148.98 -1.92 -5.52 16 2 C -0.05 -0.25 3.05 71.24 0.22 -0.03 16 3 Si 0.79 -0.42 30.79 68.60 2.11 1.69 16 4 C -0.18 -2.03 5.61 -18.63 -0.10 -2.13 16 5 C 0.05 0.46 9.89 83.00 0.82 1.28 16 6 N -0.47 -3.33 2.27 -519.98 -1.18 -4.51 16 7 C 0.09 -0.26 6.48 85.63 0.56 0.29 16 8 C 0.49 1.31 7.90 87.66 0.69 2.00 16 9 O -0.57 -9.00 16.02 -3.02 -0.05 -9.05 16 10 N -0.70 3.49 5.36 -439.62 -2.35 1.13 16 11 C 0.12 -0.23 4.25 45.61 0.19 -0.04 16 12 H 0.09 0.43 7.46 -2.39 -0.02 0.41 16 13 C -0.12 0.95 7.39 31.12 0.23 1.18 16 14 C -0.14 0.61 4.09 -10.26 -0.04 0.57 16 15 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 16 C 0.07 -0.33 7.38 71.98 0.53 0.21 16 17 F -0.24 -1.07 17.36 44.97 0.78 -0.29 16 18 C -0.15 0.32 7.45 31.21 0.23 0.55 16 19 C 0.09 1.00 6.80 39.03 0.27 1.26 16 20 C -0.14 -1.04 10.00 22.37 0.22 -0.81 16 21 C -0.10 -0.61 10.01 22.29 0.22 -0.39 16 22 C -0.15 -1.08 9.97 22.03 0.22 -0.86 16 23 C -0.08 -0.87 10.05 22.23 0.22 -0.64 16 24 C -0.12 -1.61 6.35 -20.20 -0.13 -1.74 16 25 H 0.40 -2.14 8.74 -74.05 -0.65 -2.79 16 26 H 0.08 0.13 7.96 -2.39 -0.02 0.11 16 27 H -0.28 -0.95 7.11 99.48 0.71 -0.24 16 28 H -0.29 -1.73 7.04 99.48 0.70 -1.03 16 29 H 0.18 0.78 6.30 -2.91 -0.02 0.77 16 30 H 0.15 -1.38 8.14 -2.39 -0.02 -1.40 16 31 H 0.16 -1.67 8.12 -2.39 -0.02 -1.69 16 32 H 0.42 -5.70 8.73 -92.71 -0.81 -6.51 16 33 H 0.12 -1.64 8.08 -2.39 -0.02 -1.66 16 34 H 0.08 -0.67 8.14 -2.39 -0.02 -0.69 16 35 H 0.09 -0.78 8.14 -2.39 -0.02 -0.80 16 36 H 0.10 -0.85 7.88 -2.39 -0.02 -0.87 16 37 H 0.05 0.16 8.14 -2.39 -0.02 0.14 16 38 H 0.10 -0.57 7.92 -2.39 -0.02 -0.59 16 39 H 0.13 0.34 8.06 -2.91 -0.02 0.32 16 40 H 0.15 0.03 8.06 -2.91 -0.02 0.01 16 41 H 0.14 0.28 8.06 -2.91 -0.02 0.26 16 42 H 0.13 0.99 8.06 -2.91 -0.02 0.97 16 Total: 0.00 -32.68 359.58 1.38 -31.31 By element: Atomic # 1 Polarization: -15.08 SS G_CDS: -0.37 Total: -15.45 kcal Atomic # 6 Polarization: -3.65 SS G_CDS: 4.35 Total: 0.70 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: -3.54 Total: -3.38 kcal Atomic # 8 Polarization: -12.61 SS G_CDS: -1.96 Total: -14.57 kcal Atomic # 9 Polarization: -1.07 SS G_CDS: 0.78 Total: -0.29 kcal Atomic # 14 Polarization: -0.42 SS G_CDS: 2.11 Total: 1.69 kcal Total: -32.68 1.38 -31.31 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15744752_9818708.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.913 kcal (2) G-P(sol) polarization free energy of solvation -32.685 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -23.771 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.376 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.309 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds