Wall clock time and date at job start Tue Mar 9 2021 13:15:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36423 * 125.80165 * 2 1 4 4 C 1.47378 * 127.19248 * 0.02562 * 3 2 1 5 5 O 1.21609 * 119.99724 * 7.08813 * 4 3 2 6 6 N 1.34774 * 119.99847 * 187.09622 * 4 3 2 7 7 C 1.46495 * 120.00160 * 6.25804 * 6 4 3 8 8 C 1.46508 * 119.99463 * 186.26498 * 6 4 3 9 9 H 1.08992 * 109.47298 * 359.97438 * 8 6 4 10 10 C 1.52994 * 109.46915 * 119.99680 * 8 6 4 11 11 C 1.53008 * 109.46946 * 179.97438 * 10 8 6 12 12 C 1.53002 * 109.46994 * 299.99845 * 11 10 8 13 13 H 1.09004 * 109.47347 * 300.00237 * 12 11 10 14 14 C 1.50701 * 109.47215 * 179.97438 * 12 11 10 15 15 C 1.38232 * 119.99824 * 299.72648 * 14 12 11 16 16 C 1.38230 * 119.99794 * 179.76251 * 15 14 12 17 17 C 1.38227 * 120.00136 * 0.48986 * 16 15 14 18 18 C 1.38232 * 119.99987 * 359.78743 * 17 16 15 19 19 C 1.38229 * 120.00041 * 120.00066 * 14 12 11 20 20 C 1.52998 * 109.47021 * 59.99941 * 12 11 10 21 21 C 1.52999 * 109.47253 * 299.99933 * 20 12 11 22 22 C 1.47024 * 105.61724 * 179.73561 * 3 2 1 23 23 C 1.34186 * 105.95175 * 0.26239 * 22 3 2 24 24 C 1.50692 * 125.43698 * 179.97438 * 23 22 3 25 25 O 1.42904 * 109.47308 * 65.00075 * 24 23 22 26 26 Si 1.86305 * 109.47220 * 185.00200 * 24 23 22 27 27 O 1.33660 * 125.80415 * 180.18760 * 2 1 3 28 28 H 1.09000 * 109.47062 * 89.99612 * 1 2 3 29 29 H 1.09002 * 109.47098 * 209.99909 * 1 2 3 30 30 H 1.09003 * 109.46971 * 330.00190 * 1 2 3 31 31 H 1.09001 * 109.46938 * 275.86259 * 7 6 4 32 32 H 1.08993 * 109.47208 * 35.86605 * 7 6 4 33 33 H 1.09005 * 109.47016 * 155.86890 * 7 6 4 34 34 H 1.09004 * 109.47758 * 59.99813 * 10 8 6 35 35 H 1.08996 * 109.47641 * 299.99453 * 10 8 6 36 36 H 1.08992 * 109.47010 * 59.99844 * 11 10 8 37 37 H 1.08997 * 109.47285 * 180.02562 * 11 10 8 38 38 H 1.07998 * 120.00177 * 0.02562 * 15 14 12 39 39 H 1.08005 * 119.99975 * 180.25175 * 16 15 14 40 40 H 1.08006 * 120.00407 * 179.76528 * 17 16 15 41 41 H 1.08003 * 120.00270 * 179.97438 * 18 17 16 42 42 H 1.07997 * 120.00117 * 0.02562 * 19 14 12 43 43 H 1.08996 * 109.47607 * 60.00119 * 20 12 11 44 44 H 1.09004 * 109.47277 * 180.02562 * 20 12 11 45 45 H 1.09000 * 109.47692 * 180.02562 * 21 20 12 46 46 H 1.09004 * 109.47241 * 299.99781 * 21 20 12 47 47 H 1.07996 * 127.02680 * 180.23626 * 22 3 2 48 48 H 1.09003 * 109.47315 * 305.00318 * 24 23 22 49 49 H 0.96699 * 113.99694 * 60.00142 * 25 24 23 50 50 H 1.48499 * 109.99837 * 180.02562 * 26 24 23 51 51 H 1.48496 * 109.99679 * 301.31965 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8740 2.5158 0.0005 5 8 0.6968 2.7915 0.1310 6 7 2.7845 3.4990 -0.1437 7 6 4.1807 3.1670 -0.4378 8 6 2.3778 4.8997 -0.0063 9 1 1.3107 4.9487 0.2100 10 6 3.1607 5.5482 1.1371 11 6 2.7364 7.0113 1.2803 12 6 3.0273 7.7565 -0.0239 13 1 4.0945 7.7071 -0.2404 14 6 2.6089 9.1974 0.1168 15 6 1.2902 9.5108 0.3881 16 6 0.9074 10.8323 0.5221 17 6 1.8412 11.8407 0.3747 18 6 3.1588 11.5276 0.0977 19 6 3.5427 10.2059 -0.0310 20 6 2.2445 7.1080 -1.1673 21 6 2.6687 5.6450 -1.3105 22 6 3.6850 0.5992 0.0065 23 6 3.5859 -0.7390 0.0039 24 6 4.7459 -1.7010 0.0080 25 8 5.4701 -1.5688 1.2328 26 14 4.1077 -3.4441 -0.1512 27 8 2.2889 -1.0840 -0.0035 28 1 -0.3633 0.0001 -1.0277 29 1 -0.3633 -0.8900 0.5138 30 1 -0.3633 0.8900 0.5138 31 1 4.7043 2.9428 0.4915 32 1 4.2169 2.2976 -1.0941 33 1 4.6596 4.0137 -0.9296 34 1 4.2279 5.4992 0.9205 35 1 2.9538 5.0170 2.0662 36 1 1.6694 7.0606 1.4967 37 1 3.2945 7.4734 2.0946 38 1 0.5598 8.7231 0.4996 39 1 -0.1222 11.0770 0.7381 40 1 1.5414 12.8734 0.4756 41 1 3.8884 12.3155 -0.0178 42 1 4.5720 9.9612 -0.2477 43 1 1.1773 7.1574 -0.9510 44 1 2.4520 7.6387 -2.0966 45 1 2.1113 5.1831 -2.1254 46 1 3.7358 5.5956 -1.5270 47 1 4.5928 1.1840 0.0119 48 1 5.4060 -1.4778 -0.8303 49 1 4.9437 -1.7532 2.0227 50 1 5.2420 -4.4025 -0.1478 51 1 3.1815 -3.7499 0.9686 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15753748_13308374.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:15:13 Heat of formation + Delta-G solvation = -19.815606 kcal Electronic energy + Delta-G solvation = -31796.324768 eV Core-core repulsion = 27628.837217 eV Total energy + Delta-G solvation = -4167.487551 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.182 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -43.75036 -41.30620 -40.33948 -38.67668 -38.18935 -36.34196 -34.29469 -33.21844 -32.62596 -31.83633 -31.76424 -29.72656 -29.09743 -28.13340 -25.78429 -24.75122 -23.76257 -23.72214 -23.29218 -22.42345 -21.43535 -20.43100 -19.70282 -18.63232 -18.01447 -17.84056 -17.66640 -17.35080 -16.89225 -16.29538 -16.25340 -16.05957 -15.86713 -15.69577 -15.25180 -15.09121 -14.68678 -14.63534 -14.38918 -14.23937 -14.19363 -14.12036 -14.03486 -13.97511 -13.81981 -13.73441 -13.28227 -13.06535 -12.98044 -12.82991 -12.69687 -12.55584 -12.28040 -12.16880 -12.09785 -11.82185 -11.59497 -11.39248 -11.19908 -10.99176 -10.75448 -10.67052 -9.77838 -9.74245 -9.54761 -9.44682 -5.02171 0.32198 0.48941 0.54212 0.85835 1.09836 1.43322 1.69213 1.88979 1.97478 2.35225 2.91054 3.08608 3.34551 3.51844 3.60804 3.72037 3.76388 3.79708 3.93516 4.04618 4.12978 4.14588 4.19387 4.21828 4.25567 4.25829 4.30717 4.35451 4.39249 4.42387 4.45298 4.52184 4.55486 4.58387 4.62754 4.67507 4.68693 4.72672 4.80865 4.85992 5.03264 5.04091 5.08878 5.10377 5.13962 5.18796 5.21009 5.23944 5.32072 5.36912 5.57196 5.62611 5.67865 5.76901 5.93302 6.14507 6.18830 6.39216 7.22668 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 C 0.095 3.905 3 C -0.251 4.251 4 C 0.594 3.406 5 O -0.540 6.540 6 N -0.605 5.605 7 C 0.065 3.935 8 C 0.141 3.859 9 H 0.103 0.897 10 C -0.126 4.126 11 C -0.107 4.107 12 C -0.048 4.048 13 H 0.079 0.921 14 C -0.077 4.077 15 C -0.115 4.115 16 C -0.118 4.118 17 C -0.125 4.125 18 C -0.119 4.119 19 C -0.118 4.118 20 C -0.107 4.107 21 C -0.127 4.127 22 C -0.159 4.159 23 C -0.058 4.058 24 C -0.033 4.033 25 O -0.521 6.521 26 Si 0.700 3.300 27 O -0.169 6.169 28 H 0.092 0.908 29 H 0.081 0.919 30 H 0.112 0.888 31 H 0.059 0.941 32 H 0.082 0.918 33 H 0.075 0.925 34 H 0.067 0.933 35 H 0.067 0.933 36 H 0.068 0.932 37 H 0.069 0.931 38 H 0.121 0.879 39 H 0.121 0.879 40 H 0.120 0.880 41 H 0.121 0.879 42 H 0.120 0.880 43 H 0.068 0.932 44 H 0.069 0.931 45 H 0.069 0.931 46 H 0.067 0.933 47 H 0.172 0.828 48 H 0.137 0.863 49 H 0.381 0.619 50 H -0.249 1.249 51 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.755 -0.306 -2.082 2.740 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.041 3.959 3 C -0.255 4.255 4 C 0.384 3.616 5 O -0.419 6.419 6 N -0.336 5.336 7 C -0.077 4.077 8 C 0.039 3.961 9 H 0.121 0.879 10 C -0.165 4.165 11 C -0.145 4.145 12 C -0.067 4.067 13 H 0.097 0.903 14 C -0.077 4.077 15 C -0.133 4.133 16 C -0.136 4.136 17 C -0.143 4.143 18 C -0.137 4.137 19 C -0.136 4.136 20 C -0.145 4.145 21 C -0.165 4.165 22 C -0.178 4.178 23 C -0.106 4.106 24 C -0.143 4.143 25 O -0.328 6.328 26 Si 0.599 3.401 27 O -0.066 6.066 28 H 0.111 0.889 29 H 0.100 0.900 30 H 0.130 0.870 31 H 0.078 0.922 32 H 0.101 0.899 33 H 0.094 0.906 34 H 0.085 0.915 35 H 0.086 0.914 36 H 0.087 0.913 37 H 0.088 0.912 38 H 0.139 0.861 39 H 0.139 0.861 40 H 0.139 0.861 41 H 0.139 0.861 42 H 0.138 0.862 43 H 0.087 0.913 44 H 0.088 0.912 45 H 0.088 0.912 46 H 0.085 0.915 47 H 0.189 0.811 48 H 0.155 0.845 49 H 0.229 0.771 50 H -0.173 1.173 51 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges 1.496 -1.111 -2.048 2.769 hybrid contribution 0.418 0.742 1.116 1.404 sum 1.914 -0.368 -0.932 2.161 Atomic orbital electron populations 1.20721 0.83399 1.05532 1.04770 1.22909 0.94034 0.82853 0.96072 1.21093 0.93261 0.93739 1.17391 1.17214 0.84962 0.83737 0.75685 1.90750 1.16722 1.83659 1.50806 1.47618 1.09161 1.05982 1.70887 1.22331 0.81900 1.02481 1.01017 1.21162 1.01197 0.78794 0.94996 0.87878 1.21889 1.00347 0.95766 0.98466 1.21560 1.02163 0.93879 0.96903 1.20218 1.00404 0.90473 0.95568 0.90281 1.19837 0.93655 0.94893 0.99289 1.21020 0.95675 0.96453 1.00116 1.21184 0.99638 0.92933 0.99861 1.21186 0.93517 0.99396 1.00188 1.21173 0.96304 0.96439 0.99747 1.21080 0.99231 0.92602 1.00677 1.21561 1.00354 0.94301 0.98290 1.21893 1.01985 0.95371 0.97256 1.23277 0.97138 0.93382 1.04043 1.22630 0.82873 0.95693 1.09444 1.24339 0.91389 1.07957 0.90601 1.86657 1.39411 1.91528 1.15202 0.94408 0.81316 0.73619 0.90711 1.83672 1.16456 1.35106 1.71364 0.88947 0.90040 0.86961 0.92226 0.89933 0.90649 0.91465 0.91401 0.91337 0.91244 0.86103 0.86073 0.86148 0.86093 0.86195 0.91309 0.91229 0.91244 0.91453 0.81112 0.84512 0.77078 1.17289 1.18015 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.01 9.97 36.00 0.36 0.35 16 2 C 0.09 0.18 7.37 -34.96 -0.26 -0.08 16 3 C -0.25 -0.57 6.06 -103.27 -0.63 -1.19 16 4 C 0.59 1.99 7.65 -12.54 -0.10 1.90 16 5 O -0.54 -3.19 14.17 5.27 0.07 -3.11 16 6 N -0.60 -0.56 2.76 -175.23 -0.48 -1.04 16 7 C 0.07 -0.11 7.68 59.84 0.46 0.35 16 8 C 0.14 0.06 2.51 -67.93 -0.17 -0.11 16 9 H 0.10 0.25 6.92 -51.93 -0.36 -0.10 16 10 C -0.13 0.08 5.20 -26.73 -0.14 -0.06 16 11 C -0.11 0.07 5.02 -26.73 -0.13 -0.06 16 12 C -0.05 0.04 2.36 -91.77 -0.22 -0.18 16 13 H 0.08 -0.09 7.88 -51.93 -0.41 -0.50 16 14 C -0.08 -0.05 4.78 -104.63 -0.50 -0.55 16 15 C -0.11 -0.10 8.71 -39.59 -0.34 -0.45 16 16 C -0.12 -0.12 10.05 -39.59 -0.40 -0.52 16 17 C -0.12 -0.12 10.05 -39.59 -0.40 -0.52 16 18 C -0.12 -0.10 10.05 -39.59 -0.40 -0.50 16 19 C -0.12 -0.09 9.67 -39.59 -0.38 -0.47 16 20 C -0.11 0.08 5.01 -26.73 -0.13 -0.05 16 21 C -0.13 0.09 5.19 -26.73 -0.14 -0.05 16 22 C -0.16 -0.08 8.75 -37.45 -0.33 -0.41 16 23 C -0.06 -0.02 6.18 -35.74 -0.22 -0.24 16 24 C -0.03 0.04 2.97 36.00 0.11 0.15 16 25 O -0.52 0.03 12.88 -35.23 -0.45 -0.42 16 26 Si 0.70 -0.86 32.09 -169.99 -5.46 -6.31 16 27 O -0.17 -0.23 8.90 7.63 0.07 -0.16 16 28 H 0.09 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 30 H 0.11 0.17 6.37 -51.93 -0.33 -0.16 16 31 H 0.06 -0.13 7.34 -51.93 -0.38 -0.51 16 32 H 0.08 -0.16 5.37 -51.93 -0.28 -0.44 16 33 H 0.07 -0.22 6.44 -51.93 -0.33 -0.56 16 34 H 0.07 -0.09 7.67 -51.93 -0.40 -0.49 16 35 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 36 H 0.07 -0.02 7.40 -51.93 -0.38 -0.40 16 37 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 38 H 0.12 -0.02 7.10 -52.49 -0.37 -0.39 16 39 H 0.12 -0.06 8.06 -52.48 -0.42 -0.48 16 40 H 0.12 -0.07 8.06 -52.48 -0.42 -0.49 16 41 H 0.12 -0.09 8.06 -52.48 -0.42 -0.51 16 42 H 0.12 -0.08 7.95 -52.49 -0.42 -0.50 16 43 H 0.07 -0.02 7.37 -51.93 -0.38 -0.40 16 44 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 45 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 46 H 0.07 -0.10 6.67 -51.93 -0.35 -0.45 16 47 H 0.17 -0.23 4.88 -52.49 -0.26 -0.49 16 48 H 0.14 -0.40 7.96 -51.93 -0.41 -0.81 16 49 H 0.38 -0.95 8.70 45.56 0.40 -0.56 16 50 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 51 H -0.26 -0.41 7.11 56.52 0.40 -0.01 16 LS Contribution 399.30 15.07 6.02 6.02 Total: 0.00 -6.81 399.30 -11.86 -18.67 By element: Atomic # 1 Polarization: -3.26 SS G_CDS: -7.67 Total: -10.93 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: -3.96 Total: -2.71 kcal Atomic # 7 Polarization: -0.56 SS G_CDS: -0.48 Total: -1.04 kcal Atomic # 8 Polarization: -3.38 SS G_CDS: -0.31 Total: -3.69 kcal Atomic # 14 Polarization: -0.86 SS G_CDS: -5.46 Total: -6.31 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -6.81 -11.86 -18.67 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15753748_13308374.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.148 kcal (2) G-P(sol) polarization free energy of solvation -6.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.861 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.668 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.816 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds