Wall clock time and date at job start Tue Mar 9 2021 13:31:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35897 * 116.99516 * 2 1 4 4 C 1.38613 * 120.02478 * 180.02562 * 3 2 1 5 5 C 1.38655 * 119.89042 * 180.02562 * 4 3 2 6 6 O 1.35901 * 120.02634 * 179.97438 * 5 4 3 7 7 C 1.42901 * 116.99924 * 359.97438 * 6 5 4 8 8 C 1.50705 * 109.46987 * 180.02562 * 7 6 5 9 9 O 1.21275 * 119.99947 * 0.02562 * 8 7 6 10 10 N 1.34776 * 119.99715 * 180.02562 * 8 7 6 11 11 C 1.46505 * 119.99597 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.91090 * 23.74977 * 11 10 8 13 13 C 1.53781 * 113.61334 * 154.99978 * 11 10 8 14 14 C 1.53786 * 87.17350 * 89.07333 * 13 11 10 15 15 H 1.09000 * 113.60973 * 270.92699 * 14 13 11 16 16 C 1.52990 * 113.61464 * 140.02626 * 14 13 11 17 17 F 1.39900 * 109.47354 * 179.97438 * 16 14 13 18 18 C 1.53781 * 113.61146 * 252.49455 * 11 10 8 19 19 C 1.38746 * 119.94732 * 0.24671 * 5 4 3 20 20 C 1.50704 * 119.97391 * 179.74465 * 19 5 4 21 21 O 1.42891 * 109.47544 * 285.00498 * 20 19 5 22 22 Si 1.86309 * 109.46832 * 165.00424 * 20 19 5 23 23 C 1.38197 * 120.05482 * 359.50127 * 19 5 4 24 24 C 1.38158 * 120.10698 * 0.50383 * 23 19 5 25 25 H 1.09005 * 109.47256 * 299.99521 * 1 2 3 26 26 H 1.09005 * 109.47451 * 59.99655 * 1 2 3 27 27 H 1.08996 * 109.47110 * 179.97438 * 1 2 3 28 28 H 1.08005 * 120.05652 * 0.02562 * 4 3 2 29 29 H 1.09000 * 109.46954 * 60.01071 * 7 6 5 30 30 H 1.08993 * 109.47307 * 300.00368 * 7 6 5 31 31 H 0.96995 * 120.00232 * 359.97438 * 10 8 7 32 32 H 1.09002 * 113.61445 * 203.66333 * 13 11 10 33 33 H 1.09002 * 113.61408 * 334.48063 * 13 11 10 34 34 H 1.09004 * 109.47351 * 299.99292 * 16 14 13 35 35 H 1.08997 * 109.47511 * 59.99716 * 16 14 13 36 36 H 1.09005 * 113.61471 * 25.43638 * 18 11 10 37 37 H 1.08996 * 113.61178 * 156.24980 * 18 11 10 38 38 H 1.08994 * 109.46614 * 45.00989 * 20 19 5 39 39 H 0.96702 * 114.00125 * 179.97438 * 21 20 19 40 40 H 1.48497 * 109.99967 * 298.68591 * 22 20 19 41 41 H 1.48497 * 109.99492 * 60.00541 * 22 20 19 42 42 H 1.07996 * 119.94875 * 180.24656 * 23 19 5 43 43 H 1.07999 * 119.97442 * 179.72644 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0005 5 6 4.0565 2.5211 0.0000 6 8 5.4135 2.5962 0.0000 7 6 6.1315 1.3607 0.0000 8 6 7.6124 1.6403 0.0006 9 8 8.0133 2.7849 0.0015 10 7 8.4911 0.6184 0.0002 11 6 9.9307 0.8903 0.0014 12 1 10.1769 1.8717 0.4069 13 6 10.7727 -0.2507 0.5964 14 6 10.8318 -0.8440 -0.8212 15 1 10.0066 -1.5196 -1.0465 16 6 12.1976 -1.4305 -1.1836 17 9 12.1543 -1.9441 -2.4842 18 6 10.6155 0.5895 -1.3422 19 6 3.2970 3.6822 0.0063 20 6 3.9773 5.0269 0.0127 21 8 4.5043 5.2880 1.3149 22 14 2.7433 6.3492 -0.4345 23 6 1.9171 3.6066 0.0015 24 6 1.2905 2.3753 0.0011 25 1 -0.3634 0.5138 0.8901 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 4.0197 0.3792 -0.0014 29 1 5.8700 0.7884 -0.8901 30 1 5.8699 0.7883 0.8899 31 1 8.1705 -0.2970 -0.0001 32 1 11.7421 0.0734 0.9748 33 1 10.2268 -0.8714 1.3070 34 1 12.9554 -0.6491 -1.1263 35 1 12.4465 -2.2300 -0.4858 36 1 9.9424 0.6463 -2.1978 37 1 11.5412 1.1445 -1.4944 38 1 4.7892 5.0267 -0.7146 39 1 4.9575 6.1388 1.3926 40 1 2.2114 6.1068 -1.7996 41 1 1.6313 6.3597 0.5495 42 1 1.3276 4.5115 0.0024 43 1 0.2120 2.3187 0.0019 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15781660_4974312.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:31:50 Heat of formation + Delta-G solvation = -128.391660 kcal Electronic energy + Delta-G solvation = -27448.922754 eV Core-core repulsion = 23184.344484 eV Total energy + Delta-G solvation = -4264.578271 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -48.53896 -41.84889 -41.26624 -40.16421 -39.23126 -38.03984 -36.89855 -34.65117 -32.38703 -31.51931 -30.18942 -28.82996 -28.47222 -26.91232 -25.99383 -24.26775 -23.47769 -22.37234 -21.93104 -20.53536 -19.90882 -18.54098 -18.23307 -17.89848 -17.47629 -17.35441 -17.25559 -16.83545 -16.81174 -16.77023 -16.74077 -16.38353 -15.70479 -15.58301 -15.45869 -15.13411 -14.84589 -14.51525 -14.00805 -13.88345 -13.79438 -13.74317 -13.58043 -13.45783 -13.36841 -13.16557 -12.60861 -12.42766 -12.26881 -11.98341 -11.91836 -11.77435 -11.67082 -11.65750 -11.26943 -10.92740 -10.21602 -10.07631 -9.71203 -9.08845 -4.90021 0.18894 0.31848 1.35965 1.38909 1.44784 1.70408 2.01847 2.12992 2.49311 2.55575 3.17193 3.24453 3.41161 3.46201 3.56690 3.61384 3.64803 3.79360 3.89767 3.94804 3.95056 3.99326 4.03629 4.09353 4.13223 4.19015 4.28353 4.32868 4.35554 4.47033 4.50813 4.52458 4.52828 4.65586 4.69071 4.85398 4.90382 5.00747 5.01115 5.20233 5.27991 5.39417 5.43445 6.08155 6.25858 6.34188 6.85825 7.05558 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.313 6.313 3 C 0.175 3.825 4 C -0.246 4.246 5 C 0.194 3.806 6 O -0.271 6.271 7 C 0.036 3.964 8 C 0.521 3.479 9 O -0.506 6.506 10 N -0.712 5.712 11 C 0.122 3.878 12 H 0.109 0.891 13 C -0.136 4.136 14 C -0.148 4.148 15 H 0.101 0.899 16 C 0.070 3.930 17 F -0.217 7.217 18 C -0.145 4.145 19 C -0.138 4.138 20 C -0.056 4.056 21 O -0.542 6.542 22 Si 0.681 3.319 23 C -0.043 4.043 24 C -0.238 4.238 25 H 0.059 0.941 26 H 0.059 0.941 27 H 0.104 0.896 28 H 0.140 0.860 29 H 0.096 0.904 30 H 0.097 0.903 31 H 0.403 0.597 32 H 0.102 0.898 33 H 0.080 0.920 34 H 0.077 0.923 35 H 0.076 0.924 36 H 0.076 0.924 37 H 0.096 0.904 38 H 0.074 0.926 39 H 0.379 0.621 40 H -0.255 1.255 41 H -0.251 1.251 42 H 0.131 0.869 43 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.187 -1.908 0.900 2.117 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.226 6.226 3 C 0.128 3.872 4 C -0.265 4.265 5 C 0.147 3.853 6 O -0.182 6.182 7 C -0.042 4.042 8 C 0.305 3.695 9 O -0.379 6.379 10 N -0.365 5.365 11 C 0.017 3.983 12 H 0.127 0.873 13 C -0.174 4.174 14 C -0.167 4.167 15 H 0.119 0.881 16 C 0.016 3.984 17 F -0.199 7.199 18 C -0.184 4.184 19 C -0.139 4.139 20 C -0.167 4.167 21 O -0.348 6.348 22 Si 0.582 3.418 23 C -0.061 4.061 24 C -0.257 4.257 25 H 0.078 0.922 26 H 0.077 0.923 27 H 0.122 0.878 28 H 0.158 0.842 29 H 0.114 0.886 30 H 0.115 0.885 31 H 0.238 0.762 32 H 0.120 0.880 33 H 0.099 0.901 34 H 0.095 0.905 35 H 0.094 0.906 36 H 0.095 0.905 37 H 0.115 0.885 38 H 0.092 0.908 39 H 0.226 0.774 40 H -0.180 1.180 41 H -0.176 1.176 42 H 0.149 0.851 43 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -0.791 -1.492 0.762 1.853 hybrid contribution -0.357 -1.357 -0.101 1.407 sum -1.148 -2.849 0.661 3.142 Atomic orbital electron populations 1.23154 0.77593 1.04461 1.01773 1.86073 1.22029 1.26516 1.88007 1.18653 0.91464 0.84324 0.92718 1.20384 0.92905 0.97283 1.15912 1.18341 0.81993 0.92329 0.92647 1.86236 1.14652 1.29583 1.87777 1.22517 0.90195 0.87187 1.04337 1.19977 0.87261 0.85594 0.76632 1.90785 1.79680 1.20792 1.46666 1.45463 1.05642 1.09176 1.76251 1.21812 0.78987 1.00324 0.97149 0.87278 1.23301 1.01236 0.97078 0.95833 1.23326 0.98338 0.97491 0.97537 0.88092 1.22003 0.97625 0.99052 0.79766 1.92785 1.97695 1.88976 1.40398 1.23552 1.01756 0.95171 0.97932 1.18551 0.92133 0.92420 1.10773 1.24434 1.04212 0.99007 0.89040 1.86501 1.76976 1.42590 1.28748 0.95227 0.79717 0.87103 0.79715 1.20610 0.92732 0.97520 0.95214 1.21086 1.00474 0.91667 1.12460 0.92239 0.92274 0.87768 0.84182 0.88582 0.88495 0.76248 0.87983 0.90141 0.90459 0.90580 0.90544 0.88533 0.90823 0.77360 1.17959 1.17619 0.85129 0.84719 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.96 16 2 O -0.31 -0.61 10.49 -19.42 -0.20 -0.81 16 3 C 0.17 0.48 6.68 -39.24 -0.26 0.21 16 4 C -0.25 -0.61 8.97 -39.29 -0.35 -0.96 16 5 C 0.19 0.75 6.66 -39.24 -0.26 0.49 16 6 O -0.27 -1.08 8.99 -39.34 -0.35 -1.44 16 7 C 0.04 0.00 5.22 36.01 0.19 0.19 16 8 C 0.52 0.84 7.91 -10.98 -0.09 0.75 16 9 O -0.51 -3.17 16.10 -14.35 -0.23 -3.40 16 10 N -0.71 1.16 5.26 -53.01 -0.28 0.88 16 11 C 0.12 -0.17 4.32 -67.11 -0.29 -0.46 16 12 H 0.11 0.04 7.47 -51.93 -0.39 -0.35 16 13 C -0.14 0.49 7.38 -25.92 -0.19 0.30 16 14 C -0.15 0.40 3.98 -89.67 -0.36 0.05 16 15 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 16 C 0.07 -0.14 7.35 37.15 0.27 0.13 16 17 F -0.22 -0.41 17.36 2.25 0.04 -0.37 16 18 C -0.15 0.22 7.44 -25.78 -0.19 0.03 16 19 C -0.14 -0.57 5.31 -104.45 -0.55 -1.13 16 20 C -0.06 -0.15 2.36 36.01 0.09 -0.06 16 21 O -0.54 -1.71 12.86 -35.23 -0.45 -2.16 16 22 Si 0.68 0.25 30.19 -169.99 -5.13 -4.88 16 23 C -0.04 -0.14 8.65 -39.63 -0.34 -0.48 16 24 C -0.24 -0.54 9.04 -39.40 -0.36 -0.90 16 25 H 0.06 -0.12 7.66 -51.93 -0.40 -0.52 16 26 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 27 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 28 H 0.14 0.00 6.30 -52.48 -0.33 -0.33 16 29 H 0.10 -0.24 7.66 -51.93 -0.40 -0.63 16 30 H 0.10 -0.21 7.66 -51.93 -0.40 -0.61 16 31 H 0.40 -1.83 8.70 -40.82 -0.36 -2.18 16 32 H 0.10 -0.44 8.10 -51.93 -0.42 -0.86 16 33 H 0.08 -0.33 8.14 -51.93 -0.42 -0.75 16 34 H 0.08 -0.24 7.95 -51.93 -0.41 -0.65 16 35 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 37 H 0.10 -0.19 7.98 -51.93 -0.41 -0.60 16 38 H 0.07 0.19 7.82 -51.93 -0.41 -0.22 16 39 H 0.38 -0.64 8.74 45.56 0.40 -0.24 16 40 H -0.25 -0.66 7.11 56.52 0.40 -0.26 16 41 H -0.25 -0.65 6.75 56.52 0.38 -0.27 16 42 H 0.13 0.30 4.89 -52.49 -0.26 0.04 16 43 H 0.14 0.00 6.29 -52.49 -0.33 -0.33 16 LS Contribution 361.80 15.07 5.45 5.45 Total: 0.00 -10.80 361.80 -8.71 -19.51 By element: Atomic # 1 Polarization: -6.04 SS G_CDS: -5.84 Total: -11.88 kcal Atomic # 6 Polarization: 0.81 SS G_CDS: -1.71 Total: -0.90 kcal Atomic # 7 Polarization: 1.16 SS G_CDS: -0.28 Total: 0.88 kcal Atomic # 8 Polarization: -6.57 SS G_CDS: -1.24 Total: -7.81 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.37 kcal Atomic # 14 Polarization: 0.25 SS G_CDS: -5.13 Total: -4.88 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -10.80 -8.71 -19.51 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15781660_4974312.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -108.880 kcal (2) G-P(sol) polarization free energy of solvation -10.804 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -119.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.707 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.512 kcal (6) G-S(sol) free energy of system = (1) + (5) -128.392 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds