Wall clock time and date at job start Tue Mar 9 2021 13:31:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35897 * 116.99516 * 2 1 4 4 C 1.38613 * 120.02478 * 180.02562 * 3 2 1 5 5 C 1.38655 * 119.89042 * 180.02562 * 4 3 2 6 6 O 1.35901 * 120.02634 * 179.97438 * 5 4 3 7 7 C 1.42901 * 116.99924 * 359.97438 * 6 5 4 8 8 C 1.50705 * 109.46987 * 180.02562 * 7 6 5 9 9 O 1.21275 * 119.99947 * 0.02562 * 8 7 6 10 10 N 1.34776 * 119.99715 * 180.02562 * 8 7 6 11 11 C 1.46505 * 119.99597 * 180.02562 * 10 8 7 12 12 H 1.08998 * 112.91090 * 23.74977 * 11 10 8 13 13 C 1.53781 * 113.61334 * 154.99978 * 11 10 8 14 14 C 1.53786 * 87.17350 * 89.07333 * 13 11 10 15 15 H 1.09000 * 113.60973 * 270.92699 * 14 13 11 16 16 C 1.52990 * 113.61464 * 140.02626 * 14 13 11 17 17 F 1.39900 * 109.47354 * 179.97438 * 16 14 13 18 18 C 1.53781 * 113.61146 * 252.49455 * 11 10 8 19 19 C 1.38746 * 119.94732 * 0.24671 * 5 4 3 20 20 C 1.50704 * 119.97391 * 179.74465 * 19 5 4 21 21 O 1.42891 * 109.47544 * 285.00498 * 20 19 5 22 22 Si 1.86309 * 109.46832 * 165.00424 * 20 19 5 23 23 C 1.38197 * 120.05482 * 359.50127 * 19 5 4 24 24 C 1.38158 * 120.10698 * 0.50383 * 23 19 5 25 25 H 1.09005 * 109.47256 * 299.99521 * 1 2 3 26 26 H 1.09005 * 109.47451 * 59.99655 * 1 2 3 27 27 H 1.08996 * 109.47110 * 179.97438 * 1 2 3 28 28 H 1.08005 * 120.05652 * 0.02562 * 4 3 2 29 29 H 1.09000 * 109.46954 * 60.01071 * 7 6 5 30 30 H 1.08993 * 109.47307 * 300.00368 * 7 6 5 31 31 H 0.96995 * 120.00232 * 359.97438 * 10 8 7 32 32 H 1.09002 * 113.61445 * 203.66333 * 13 11 10 33 33 H 1.09002 * 113.61408 * 334.48063 * 13 11 10 34 34 H 1.09004 * 109.47351 * 299.99292 * 16 14 13 35 35 H 1.08997 * 109.47511 * 59.99716 * 16 14 13 36 36 H 1.09005 * 113.61471 * 25.43638 * 18 11 10 37 37 H 1.08996 * 113.61178 * 156.24980 * 18 11 10 38 38 H 1.08994 * 109.46614 * 45.00989 * 20 19 5 39 39 H 0.96702 * 114.00125 * 179.97438 * 21 20 19 40 40 H 1.48497 * 109.99967 * 298.68591 * 22 20 19 41 41 H 1.48497 * 109.99492 * 60.00541 * 22 20 19 42 42 H 1.07996 * 119.94875 * 180.24656 * 23 19 5 43 43 H 1.07999 * 119.97442 * 179.72644 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4301 1.2842 -0.0005 5 6 4.0565 2.5211 0.0000 6 8 5.4135 2.5962 0.0000 7 6 6.1315 1.3607 0.0000 8 6 7.6124 1.6403 0.0006 9 8 8.0133 2.7849 0.0015 10 7 8.4911 0.6184 0.0002 11 6 9.9307 0.8903 0.0014 12 1 10.1769 1.8717 0.4069 13 6 10.7727 -0.2507 0.5964 14 6 10.8318 -0.8440 -0.8212 15 1 10.0066 -1.5196 -1.0465 16 6 12.1976 -1.4305 -1.1836 17 9 12.1543 -1.9441 -2.4842 18 6 10.6155 0.5895 -1.3422 19 6 3.2970 3.6822 0.0063 20 6 3.9773 5.0269 0.0127 21 8 4.5043 5.2880 1.3149 22 14 2.7433 6.3492 -0.4345 23 6 1.9171 3.6066 0.0015 24 6 1.2905 2.3753 0.0011 25 1 -0.3634 0.5138 0.8901 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 4.0197 0.3792 -0.0014 29 1 5.8700 0.7884 -0.8901 30 1 5.8699 0.7883 0.8899 31 1 8.1705 -0.2970 -0.0001 32 1 11.7421 0.0734 0.9748 33 1 10.2268 -0.8714 1.3070 34 1 12.9554 -0.6491 -1.1263 35 1 12.4465 -2.2300 -0.4858 36 1 9.9424 0.6463 -2.1978 37 1 11.5412 1.1445 -1.4944 38 1 4.7892 5.0267 -0.7146 39 1 4.9575 6.1388 1.3926 40 1 2.2114 6.1068 -1.7996 41 1 1.6313 6.3597 0.5495 42 1 1.3276 4.5115 0.0024 43 1 0.2120 2.3187 0.0019 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15781660_4974312.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:31:49 Heat of formation + Delta-G solvation = -130.211763 kcal Electronic energy + Delta-G solvation = -27449.001680 eV Core-core repulsion = 23184.344484 eV Total energy + Delta-G solvation = -4264.657196 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.141 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -48.53670 -41.96404 -41.29018 -40.20873 -39.28872 -38.19383 -37.05478 -34.70001 -32.51327 -31.63004 -30.18110 -28.77381 -28.41659 -26.73324 -26.13066 -24.28786 -23.45736 -22.49824 -21.98987 -20.44501 -19.98926 -18.60932 -18.41077 -17.98430 -17.53946 -17.43649 -17.16281 -16.90192 -16.80277 -16.76796 -16.70888 -16.33972 -15.78258 -15.68054 -15.57854 -15.24652 -14.89215 -14.56412 -14.13455 -13.90919 -13.88245 -13.67662 -13.53664 -13.41284 -13.32846 -13.26336 -12.60109 -12.49340 -12.13918 -12.01811 -11.94745 -11.84060 -11.75972 -11.52997 -11.14729 -11.07521 -10.23119 -10.20912 -9.85620 -9.24969 -4.94972 0.01320 0.14647 1.29624 1.33168 1.35220 1.63089 1.91102 2.11495 2.38631 2.47638 3.33972 3.40990 3.42118 3.48054 3.54928 3.63243 3.75564 3.83196 3.85022 3.96731 3.98678 4.08062 4.16272 4.17526 4.22594 4.25896 4.30815 4.31418 4.39616 4.50558 4.58392 4.68208 4.70062 4.77474 4.80639 4.86051 4.99990 5.04511 5.05759 5.11704 5.16293 5.28029 5.50846 6.00205 6.21546 6.36523 6.90186 7.04366 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.324 6.324 3 C 0.166 3.834 4 C -0.247 4.247 5 C 0.180 3.820 6 O -0.297 6.297 7 C 0.032 3.968 8 C 0.519 3.481 9 O -0.563 6.563 10 N -0.694 5.694 11 C 0.112 3.888 12 H 0.087 0.913 13 C -0.119 4.119 14 C -0.140 4.140 15 H 0.105 0.895 16 C 0.062 3.938 17 F -0.241 7.241 18 C -0.150 4.150 19 C -0.167 4.167 20 C -0.074 4.074 21 O -0.564 6.564 22 Si 0.779 3.221 23 C -0.057 4.057 24 C -0.240 4.240 25 H 0.066 0.934 26 H 0.067 0.933 27 H 0.122 0.878 28 H 0.162 0.838 29 H 0.123 0.877 30 H 0.122 0.878 31 H 0.420 0.580 32 H 0.114 0.886 33 H 0.094 0.906 34 H 0.088 0.912 35 H 0.094 0.906 36 H 0.060 0.940 37 H 0.098 0.902 38 H 0.066 0.934 39 H 0.397 0.603 40 H -0.285 1.285 41 H -0.279 1.279 42 H 0.135 0.865 43 H 0.155 0.845 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.521 -3.273 1.371 3.586 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.237 6.237 3 C 0.120 3.880 4 C -0.266 4.266 5 C 0.134 3.866 6 O -0.209 6.209 7 C -0.046 4.046 8 C 0.305 3.695 9 O -0.440 6.440 10 N -0.348 5.348 11 C 0.007 3.993 12 H 0.105 0.895 13 C -0.157 4.157 14 C -0.158 4.158 15 H 0.124 0.876 16 C 0.007 3.993 17 F -0.222 7.222 18 C -0.188 4.188 19 C -0.168 4.168 20 C -0.183 4.183 21 O -0.373 6.373 22 Si 0.683 3.317 23 C -0.074 4.074 24 C -0.259 4.259 25 H 0.084 0.916 26 H 0.085 0.915 27 H 0.140 0.860 28 H 0.180 0.820 29 H 0.141 0.859 30 H 0.139 0.861 31 H 0.257 0.743 32 H 0.132 0.868 33 H 0.112 0.888 34 H 0.106 0.894 35 H 0.112 0.888 36 H 0.079 0.921 37 H 0.117 0.883 38 H 0.084 0.916 39 H 0.247 0.753 40 H -0.212 1.212 41 H -0.206 1.206 42 H 0.152 0.848 43 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges -1.091 -2.912 1.243 3.349 hybrid contribution -0.238 -1.016 -0.245 1.072 sum -1.329 -3.929 0.999 4.266 Atomic orbital electron populations 1.23423 0.75976 1.05953 1.02511 1.86059 1.23760 1.26057 1.87861 1.18810 0.91768 0.84786 0.92666 1.20626 0.93269 0.97599 1.15156 1.18487 0.82071 0.92856 0.93200 1.86195 1.14929 1.31786 1.87985 1.22778 0.88649 0.86424 1.06710 1.20349 0.88250 0.85247 0.75686 1.90758 1.80597 1.23024 1.49659 1.45351 1.05374 1.09464 1.74575 1.21880 0.79248 1.00405 0.97759 0.89458 1.23247 1.01332 0.95621 0.95506 1.23262 0.98278 0.96490 0.97802 0.87649 1.22266 0.98254 1.00026 0.78744 1.92736 1.97812 1.89370 1.42315 1.23579 1.01534 0.96511 0.97195 1.18943 0.92869 0.93440 1.11541 1.24790 1.04930 0.99902 0.88639 1.86444 1.77436 1.44236 1.29148 0.94114 0.76567 0.84855 0.76170 1.20755 0.92609 0.98241 0.95829 1.21342 1.01610 0.91256 1.11661 0.91558 0.91469 0.85984 0.82025 0.85938 0.86063 0.74254 0.86797 0.88777 0.89387 0.88814 0.92083 0.88342 0.91628 0.75339 1.21180 1.20608 0.84771 0.82699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.32 -1.02 10.49 -92.39 -0.97 -1.99 16 3 C 0.17 0.89 6.68 22.49 0.15 1.04 16 4 C -0.25 -1.24 8.97 22.46 0.20 -1.04 16 5 C 0.18 1.60 6.66 22.49 0.15 1.75 16 6 O -0.30 -2.80 8.99 -73.40 -0.66 -3.46 16 7 C 0.03 0.01 5.22 71.24 0.37 0.38 16 8 C 0.52 2.21 7.91 87.66 0.69 2.91 16 9 O -0.56 -8.44 16.10 16.02 0.26 -8.19 16 10 N -0.69 2.18 5.26 -440.03 -2.32 -0.14 16 11 C 0.11 -0.26 4.32 45.52 0.20 -0.06 16 12 H 0.09 0.22 7.47 -2.39 -0.02 0.21 16 13 C -0.12 0.98 7.38 31.12 0.23 1.21 16 14 C -0.14 0.86 3.98 -10.18 -0.04 0.82 16 15 H 0.11 -0.73 8.14 -2.39 -0.02 -0.75 16 16 C 0.06 -0.30 7.35 71.98 0.53 0.23 16 17 F -0.24 -0.91 17.36 44.97 0.78 -0.13 16 18 C -0.15 0.36 7.44 31.21 0.23 0.60 16 19 C -0.17 -1.64 5.31 -19.75 -0.10 -1.75 16 20 C -0.07 -0.51 2.36 71.24 0.17 -0.35 16 21 O -0.56 -4.44 12.86 -148.98 -1.92 -6.35 16 22 Si 0.78 1.16 30.19 68.60 2.07 3.23 16 23 C -0.06 -0.42 8.65 22.24 0.19 -0.23 16 24 C -0.24 -1.14 9.04 22.38 0.20 -0.94 16 25 H 0.07 -0.34 7.66 -2.38 -0.02 -0.36 16 26 H 0.07 -0.36 7.66 -2.38 -0.02 -0.38 16 27 H 0.12 -0.94 8.14 -2.39 -0.02 -0.96 16 28 H 0.16 -0.14 6.30 -2.91 -0.02 -0.16 16 29 H 0.12 -0.68 7.66 -2.39 -0.02 -0.70 16 30 H 0.12 -0.61 7.66 -2.39 -0.02 -0.63 16 31 H 0.42 -4.23 8.70 -92.71 -0.81 -5.03 16 32 H 0.11 -1.16 8.10 -2.39 -0.02 -1.18 16 33 H 0.09 -0.97 8.14 -2.39 -0.02 -0.99 16 34 H 0.09 -0.62 7.95 -2.38 -0.02 -0.64 16 35 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 36 H 0.06 0.04 8.14 -2.38 -0.02 0.02 16 37 H 0.10 -0.30 7.98 -2.39 -0.02 -0.32 16 38 H 0.07 0.49 7.82 -2.39 -0.02 0.47 16 39 H 0.40 -0.83 8.74 -74.06 -0.65 -1.48 16 40 H -0.28 -1.76 7.11 99.48 0.71 -1.05 16 41 H -0.28 -1.64 6.75 99.48 0.67 -0.97 16 42 H 0.14 0.75 4.89 -2.91 -0.01 0.74 16 43 H 0.16 -0.08 6.29 -2.91 -0.02 -0.10 16 Total: 0.00 -27.60 361.80 1.14 -26.46 By element: Atomic # 1 Polarization: -14.66 SS G_CDS: -0.39 Total: -15.05 kcal Atomic # 6 Polarization: 1.34 SS G_CDS: 4.28 Total: 5.63 kcal Atomic # 7 Polarization: 2.18 SS G_CDS: -2.32 Total: -0.14 kcal Atomic # 8 Polarization: -16.71 SS G_CDS: -3.29 Total: -19.99 kcal Atomic # 9 Polarization: -0.91 SS G_CDS: 0.78 Total: -0.13 kcal Atomic # 14 Polarization: 1.16 SS G_CDS: 2.07 Total: 3.23 kcal Total: -27.60 1.14 -26.46 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15781660_4974312.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.750 kcal (2) G-P(sol) polarization free energy of solvation -27.604 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.354 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.142 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.461 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.212 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds