Wall clock time and date at job start Tue Mar 9 2021 13:32:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86300 * 109.47407 * 2 1 4 4 C 1.50701 * 109.47045 * 119.99402 * 2 1 3 5 5 C 1.34233 * 126.50336 * 255.02561 * 4 2 1 6 6 N 1.36837 * 109.93996 * 179.71011 * 5 4 2 7 7 C 1.46495 * 125.06435 * 180.23251 * 6 5 4 8 8 C 1.50700 * 109.47147 * 265.02427 * 7 6 5 9 9 O 1.21284 * 120.00106 * 359.97438 * 8 7 6 10 10 N 1.34774 * 120.00453 * 180.02562 * 8 7 6 11 11 C 1.46498 * 120.00198 * 180.02562 * 10 8 7 12 12 H 1.08995 * 112.84935 * 336.18691 * 11 10 8 13 13 C 1.53782 * 113.61776 * 107.50018 * 11 10 8 14 14 C 1.53781 * 87.08050 * 89.11125 * 13 11 10 15 15 H 1.09002 * 113.69611 * 270.86912 * 14 13 11 16 16 C 1.53005 * 113.61038 * 139.97943 * 14 13 11 17 17 F 1.39905 * 109.46956 * 87.50534 * 16 14 13 18 18 C 1.53775 * 87.08136 * 25.43352 * 14 13 11 19 19 C 1.37694 * 109.87181 * 0.26491 * 6 5 4 20 20 C 1.39089 * 133.51326 * 179.97438 * 19 6 5 21 21 C 1.37789 * 119.77888 * 180.02562 * 20 19 6 22 22 C 1.38788 * 120.66660 * 0.04206 * 21 20 19 23 23 C 1.36670 * 120.52797 * 359.95958 * 22 21 20 24 24 C 1.39586 * 119.76411 * 0.02562 * 23 22 21 25 25 H 0.96703 * 113.99510 * 59.99856 * 1 2 3 26 26 H 1.08998 * 109.47698 * 239.99777 * 2 1 3 27 27 H 1.48511 * 109.99894 * 298.67674 * 3 2 1 28 28 H 1.48500 * 110.00399 * 59.99528 * 3 2 1 29 29 H 1.08002 * 125.03336 * 359.97438 * 5 4 2 30 30 H 1.08999 * 109.47085 * 25.02292 * 7 6 5 31 31 H 1.09000 * 109.47328 * 145.02655 * 7 6 5 32 32 H 0.97005 * 119.99548 * 359.97438 * 10 8 7 33 33 H 1.08997 * 113.61316 * 203.66555 * 13 11 10 34 34 H 1.09004 * 113.60705 * 334.56536 * 13 11 10 35 35 H 1.08998 * 109.46837 * 207.50090 * 16 14 13 36 36 H 1.08994 * 109.47399 * 327.50381 * 16 14 13 37 37 H 1.09001 * 113.61359 * 220.01049 * 18 14 13 38 38 H 1.09005 * 113.69340 * 89.12479 * 18 14 13 39 39 H 1.07998 * 120.10929 * 0.02562 * 20 19 6 40 40 H 1.07996 * 119.67090 * 180.02562 * 21 20 19 41 41 H 1.08000 * 119.73950 * 179.97438 * 22 21 20 42 42 H 1.07997 * 120.11709 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.4603 -0.1374 2.3232 6 7 2.7965 -1.0984 3.2375 7 6 3.3947 -0.8392 4.5494 8 6 4.8934 -0.9627 4.4514 9 8 5.4109 -1.2403 3.3902 10 7 5.6587 -0.7656 5.5431 11 6 7.1157 -0.8851 5.4477 12 1 7.4353 -1.5126 4.6158 13 6 7.8507 0.4637 5.5223 14 6 7.8815 0.2732 7.0479 15 1 7.0075 0.6786 7.5578 16 6 9.1996 0.7062 7.6930 17 9 9.1428 2.0700 7.9997 18 6 7.7934 -1.2389 6.7820 19 6 2.4895 -2.3452 2.7405 20 6 2.6212 -3.6355 3.2429 21 6 2.2113 -4.7104 2.4844 22 6 1.6681 -4.5196 1.2216 23 6 1.5295 -3.2605 0.7085 24 6 1.9379 -2.1572 1.4597 25 1 -0.3933 0.4417 -0.7651 26 1 1.7924 -0.5138 -0.8899 27 1 1.5880 2.4585 -1.2244 28 1 1.5615 2.4680 1.2084 29 1 2.5962 0.9250 2.4620 30 1 3.1336 0.1676 4.8753 31 1 3.0168 -1.5639 5.2706 32 1 5.2448 -0.5439 6.3920 33 1 8.8378 0.4491 5.0603 34 1 7.2438 1.3099 5.2001 35 1 9.3617 0.1348 8.6069 36 1 10.0207 0.5236 6.9998 37 1 7.1405 -1.7671 7.4769 38 1 8.7643 -1.7202 6.6644 39 1 3.0434 -3.7943 4.2242 40 1 2.3140 -5.7114 2.8764 41 1 1.3521 -5.3729 0.6398 42 1 1.1055 -3.1196 -0.2748 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_15781660_9818708.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:24 Heat of formation + Delta-G solvation = -19.210518 kcal Electronic energy + Delta-G solvation = -26300.080499 eV Core-core repulsion = 22355.722870 eV Total energy + Delta-G solvation = -3944.357629 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.137 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -48.57361 -42.46342 -41.27683 -39.46922 -37.95620 -37.57124 -34.74333 -34.04450 -31.40960 -30.16068 -29.84269 -28.64180 -26.97155 -25.72947 -24.03307 -23.53377 -22.69842 -21.81970 -20.58713 -20.40567 -18.71566 -18.32578 -18.10467 -17.64428 -17.31467 -16.89625 -16.83602 -16.53560 -16.31167 -16.24051 -15.77844 -15.54156 -14.98632 -14.83465 -14.70916 -14.59454 -14.36905 -14.03906 -13.95662 -13.81321 -13.58734 -13.41379 -13.29903 -12.64496 -12.43970 -12.36178 -12.29885 -12.04308 -11.96276 -11.68872 -11.58993 -11.32041 -11.11376 -10.39285 -10.26513 -10.25788 -8.99463 -8.50468 -4.87703 0.30490 0.81375 1.35869 1.37526 1.43432 1.63133 1.67193 1.99659 2.09082 3.11340 3.13617 3.20190 3.38231 3.43941 3.44916 3.59856 3.69227 3.73990 3.83221 3.89182 3.91565 4.00934 4.09820 4.15316 4.33792 4.37726 4.41767 4.47533 4.48057 4.48489 4.64275 4.72108 4.80644 4.81900 4.85488 4.92930 4.97417 5.01683 5.27663 5.36232 5.66837 5.82708 5.87980 5.92039 6.13975 6.31669 6.38931 6.62196 6.97959 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.537 6.537 2 C -0.037 4.037 3 Si 0.678 3.322 4 C -0.150 4.150 5 C 0.071 3.929 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.494 3.506 9 O -0.509 6.509 10 N -0.712 5.712 11 C 0.121 3.879 12 H 0.107 0.893 13 C -0.145 4.145 14 C -0.147 4.147 15 H 0.101 0.899 16 C 0.070 3.930 17 F -0.217 7.217 18 C -0.137 4.137 19 C 0.109 3.891 20 C -0.127 4.127 21 C -0.097 4.097 22 C -0.146 4.146 23 C -0.065 4.065 24 C -0.086 4.086 25 H 0.375 0.625 26 H 0.072 0.928 27 H -0.259 1.259 28 H -0.255 1.255 29 H 0.169 0.831 30 H 0.123 0.877 31 H 0.119 0.881 32 H 0.402 0.598 33 H 0.096 0.904 34 H 0.076 0.924 35 H 0.076 0.924 36 H 0.077 0.923 37 H 0.079 0.921 38 H 0.101 0.899 39 H 0.115 0.885 40 H 0.125 0.875 41 H 0.123 0.877 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.249 -0.337 3.645 4.296 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.147 4.147 3 Si 0.579 3.421 4 C -0.157 4.157 5 C -0.053 4.053 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.278 3.722 9 O -0.382 6.382 10 N -0.365 5.365 11 C 0.016 3.984 12 H 0.125 0.875 13 C -0.184 4.184 14 C -0.166 4.166 15 H 0.119 0.881 16 C 0.015 3.985 17 F -0.199 7.199 18 C -0.175 4.175 19 C 0.005 3.995 20 C -0.148 4.148 21 C -0.116 4.116 22 C -0.165 4.165 23 C -0.084 4.084 24 C -0.090 4.090 25 H 0.223 0.777 26 H 0.090 0.910 27 H -0.184 1.184 28 H -0.180 1.180 29 H 0.186 0.814 30 H 0.141 0.859 31 H 0.137 0.863 32 H 0.237 0.763 33 H 0.114 0.886 34 H 0.094 0.906 35 H 0.094 0.906 36 H 0.096 0.904 37 H 0.098 0.902 38 H 0.119 0.881 39 H 0.133 0.867 40 H 0.143 0.857 41 H 0.141 0.859 42 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 2.634 0.102 3.703 4.545 hybrid contribution -1.181 0.096 0.117 1.190 sum 1.453 0.199 3.820 4.092 Atomic orbital electron populations 1.86641 1.18330 1.79996 1.49382 1.24004 0.83794 1.09779 0.97155 0.95091 0.91815 0.74660 0.80516 1.19413 1.08548 0.91598 0.96165 1.21505 1.01026 0.93938 0.88859 1.43176 1.52946 1.04697 1.14145 1.21579 0.90677 1.05929 0.85224 1.21027 0.89500 0.77262 0.84386 1.90815 1.74269 1.45268 1.27865 1.45625 1.06450 1.72342 1.12124 1.21814 0.79327 0.97968 0.99337 0.87455 1.23511 1.01804 0.98247 0.94792 1.23283 0.98834 0.97273 0.97209 0.88070 1.22027 0.98033 0.77294 1.01153 1.92787 1.97681 1.34603 1.94792 1.23305 1.02137 0.95316 0.96755 1.18151 1.01376 0.85842 0.94124 1.19948 1.05021 0.89212 1.00580 1.20815 0.98436 0.97915 0.94465 1.20661 1.02528 0.96886 0.96401 1.20271 0.98004 0.90941 0.99139 1.18944 1.03368 0.92754 0.93931 0.77744 0.90993 1.18381 1.17964 0.81414 0.85932 0.86340 0.76300 0.88592 0.90565 0.90569 0.90450 0.90199 0.88063 0.86720 0.85718 0.85932 0.86083 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.46 12.86 -35.23 -0.45 -1.91 16 2 C -0.04 -0.07 3.05 36.01 0.11 0.04 16 3 Si 0.68 0.10 30.79 -169.99 -5.23 -5.14 16 4 C -0.15 -0.55 5.61 -102.71 -0.58 -1.13 16 5 C 0.07 0.16 9.89 -16.73 -0.17 -0.01 16 6 N -0.47 -0.93 2.27 -115.71 -0.26 -1.19 16 7 C 0.09 -0.19 6.48 -5.20 -0.03 -0.23 16 8 C 0.49 -0.09 7.90 -10.99 -0.09 -0.17 16 9 O -0.51 -2.39 16.02 5.55 0.09 -2.30 16 10 N -0.71 2.10 5.26 -53.02 -0.28 1.82 16 11 C 0.12 -0.27 4.32 -67.12 -0.29 -0.56 16 12 H 0.11 -0.02 7.46 -51.93 -0.39 -0.40 16 13 C -0.14 0.34 7.43 -25.92 -0.19 0.14 16 14 C -0.15 0.49 3.97 -89.81 -0.36 0.14 16 15 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 16 C 0.07 -0.17 7.39 37.16 0.27 0.10 16 17 F -0.22 -0.31 17.36 2.25 0.04 -0.27 16 18 C -0.14 0.57 7.39 -25.92 -0.19 0.38 16 19 C 0.11 0.43 6.80 -83.98 -0.57 -0.14 16 20 C -0.13 -0.36 10.00 -39.43 -0.39 -0.75 16 21 C -0.10 -0.23 10.01 -39.54 -0.40 -0.63 16 22 C -0.15 -0.41 9.97 -39.94 -0.40 -0.80 16 23 C -0.06 -0.26 10.05 -39.65 -0.40 -0.65 16 24 C -0.09 -0.42 6.35 -105.14 -0.67 -1.09 16 25 H 0.38 -0.56 8.74 45.56 0.40 -0.16 16 26 H 0.07 0.05 7.96 -51.93 -0.41 -0.36 16 27 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 28 H -0.26 -0.57 7.04 56.52 0.40 -0.18 16 29 H 0.17 -0.06 6.30 -52.49 -0.33 -0.39 16 30 H 0.12 -0.62 8.12 -51.93 -0.42 -1.04 16 31 H 0.12 -0.50 8.14 -51.93 -0.42 -0.93 16 32 H 0.40 -2.33 8.70 -40.82 -0.36 -2.69 16 33 H 0.10 -0.25 7.90 -51.93 -0.41 -0.66 16 34 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 35 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 36 H 0.08 -0.27 7.84 -51.93 -0.41 -0.68 16 37 H 0.08 -0.37 8.14 -51.93 -0.42 -0.80 16 38 H 0.10 -0.48 8.10 -51.93 -0.42 -0.90 16 39 H 0.11 0.08 8.06 -52.49 -0.42 -0.34 16 40 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 41 H 0.12 0.09 8.06 -52.49 -0.42 -0.34 16 42 H 0.12 0.32 8.06 -52.49 -0.42 -0.10 16 LS Contribution 359.39 15.07 5.42 5.42 Total: 0.00 -10.62 359.39 -10.77 -21.39 By element: Atomic # 1 Polarization: -6.72 SS G_CDS: -5.75 Total: -12.48 kcal Atomic # 6 Polarization: -1.01 SS G_CDS: -4.33 Total: -5.35 kcal Atomic # 7 Polarization: 1.17 SS G_CDS: -0.54 Total: 0.63 kcal Atomic # 8 Polarization: -3.85 SS G_CDS: -0.36 Total: -4.21 kcal Atomic # 9 Polarization: -0.31 SS G_CDS: 0.04 Total: -0.27 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: -5.23 Total: -5.14 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -10.62 -10.77 -21.39 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15781660_9818708.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.182 kcal (2) G-P(sol) polarization free energy of solvation -10.619 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.437 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.773 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.393 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.211 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds