Wall clock time and date at job start Tue Mar 9 2021 13:32:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86300 * 109.47407 * 2 1 4 4 C 1.50701 * 109.47045 * 119.99402 * 2 1 3 5 5 C 1.34233 * 126.50336 * 255.02561 * 4 2 1 6 6 N 1.36837 * 109.93996 * 179.71011 * 5 4 2 7 7 C 1.46495 * 125.06435 * 180.23251 * 6 5 4 8 8 C 1.50700 * 109.47147 * 265.02427 * 7 6 5 9 9 O 1.21284 * 120.00106 * 359.97438 * 8 7 6 10 10 N 1.34774 * 120.00453 * 180.02562 * 8 7 6 11 11 C 1.46498 * 120.00198 * 180.02562 * 10 8 7 12 12 H 1.08995 * 112.84935 * 336.18691 * 11 10 8 13 13 C 1.53782 * 113.61776 * 107.50018 * 11 10 8 14 14 C 1.53781 * 87.08050 * 89.11125 * 13 11 10 15 15 H 1.09002 * 113.69611 * 270.86912 * 14 13 11 16 16 C 1.53005 * 113.61038 * 139.97943 * 14 13 11 17 17 F 1.39905 * 109.46956 * 87.50534 * 16 14 13 18 18 C 1.53775 * 87.08136 * 25.43352 * 14 13 11 19 19 C 1.37694 * 109.87181 * 0.26491 * 6 5 4 20 20 C 1.39089 * 133.51326 * 179.97438 * 19 6 5 21 21 C 1.37789 * 119.77888 * 180.02562 * 20 19 6 22 22 C 1.38788 * 120.66660 * 0.04206 * 21 20 19 23 23 C 1.36670 * 120.52797 * 359.95958 * 22 21 20 24 24 C 1.39586 * 119.76411 * 0.02562 * 23 22 21 25 25 H 0.96703 * 113.99510 * 59.99856 * 1 2 3 26 26 H 1.08998 * 109.47698 * 239.99777 * 2 1 3 27 27 H 1.48511 * 109.99894 * 298.67674 * 3 2 1 28 28 H 1.48500 * 110.00399 * 59.99528 * 3 2 1 29 29 H 1.08002 * 125.03336 * 359.97438 * 5 4 2 30 30 H 1.08999 * 109.47085 * 25.02292 * 7 6 5 31 31 H 1.09000 * 109.47328 * 145.02655 * 7 6 5 32 32 H 0.97005 * 119.99548 * 359.97438 * 10 8 7 33 33 H 1.08997 * 113.61316 * 203.66555 * 13 11 10 34 34 H 1.09004 * 113.60705 * 334.56536 * 13 11 10 35 35 H 1.08998 * 109.46837 * 207.50090 * 16 14 13 36 36 H 1.08994 * 109.47399 * 327.50381 * 16 14 13 37 37 H 1.09001 * 113.61359 * 220.01049 * 18 14 13 38 38 H 1.09005 * 113.69340 * 89.12479 * 18 14 13 39 39 H 1.07998 * 120.10929 * 0.02562 * 20 19 6 40 40 H 1.07996 * 119.67090 * 180.02562 * 21 20 19 41 41 H 1.08000 * 119.73950 * 179.97438 * 22 21 20 42 42 H 1.07997 * 120.11709 * 180.02562 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7103 1.2305 5 6 2.4603 -0.1374 2.3232 6 7 2.7965 -1.0984 3.2375 7 6 3.3947 -0.8392 4.5494 8 6 4.8934 -0.9627 4.4514 9 8 5.4109 -1.2403 3.3902 10 7 5.6587 -0.7656 5.5431 11 6 7.1157 -0.8851 5.4477 12 1 7.4353 -1.5126 4.6158 13 6 7.8507 0.4637 5.5223 14 6 7.8815 0.2732 7.0479 15 1 7.0075 0.6786 7.5578 16 6 9.1996 0.7062 7.6930 17 9 9.1428 2.0700 7.9997 18 6 7.7934 -1.2389 6.7820 19 6 2.4895 -2.3452 2.7405 20 6 2.6212 -3.6355 3.2429 21 6 2.2113 -4.7104 2.4844 22 6 1.6681 -4.5196 1.2216 23 6 1.5295 -3.2605 0.7085 24 6 1.9379 -2.1572 1.4597 25 1 -0.3933 0.4417 -0.7651 26 1 1.7924 -0.5138 -0.8899 27 1 1.5880 2.4585 -1.2244 28 1 1.5615 2.4680 1.2084 29 1 2.5962 0.9250 2.4620 30 1 3.1336 0.1676 4.8753 31 1 3.0168 -1.5639 5.2706 32 1 5.2448 -0.5439 6.3920 33 1 8.8378 0.4491 5.0603 34 1 7.2438 1.3099 5.2001 35 1 9.3617 0.1348 8.6069 36 1 10.0207 0.5236 6.9998 37 1 7.1405 -1.7671 7.4769 38 1 8.7643 -1.7202 6.6644 39 1 3.0434 -3.7943 4.2242 40 1 2.3140 -5.7114 2.8764 41 1 1.3521 -5.3729 0.6398 42 1 1.1055 -3.1196 -0.2748 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15781660_9818708.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:32:23 Heat of formation + Delta-G solvation = -18.518935 kcal Electronic energy + Delta-G solvation = -26300.050509 eV Core-core repulsion = 22355.722870 eV Total energy + Delta-G solvation = -3944.327639 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.137 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.52870 -42.54873 -41.17930 -39.39721 -38.08942 -37.69066 -34.69206 -34.08679 -31.49521 -30.29984 -29.75822 -28.58618 -26.72563 -25.79493 -23.98694 -23.56451 -22.75504 -21.80378 -20.56865 -20.36575 -18.65723 -18.43520 -18.14204 -17.71817 -17.15632 -16.77099 -16.73741 -16.47271 -16.39460 -16.19444 -15.83166 -15.60389 -14.98203 -14.92148 -14.75154 -14.70108 -14.39292 -14.13687 -13.88965 -13.59892 -13.51771 -13.37630 -13.19623 -12.74454 -12.57770 -12.49882 -12.11930 -12.09846 -11.83237 -11.73461 -11.48708 -11.17304 -11.10743 -10.55593 -10.35905 -10.14265 -9.16912 -8.64679 -4.89366 0.13303 0.63426 1.31704 1.40635 1.42950 1.58436 1.60918 1.91953 2.17614 2.93963 3.37133 3.44444 3.51069 3.56600 3.63273 3.69710 3.75574 3.78452 3.84991 4.00625 4.11232 4.17685 4.22630 4.24789 4.26859 4.39619 4.41525 4.56575 4.59689 4.69786 4.72186 4.78031 4.78097 4.83541 4.89566 5.01896 5.07095 5.13422 5.20443 5.50568 5.55270 5.65343 5.72309 5.74430 6.15746 6.22889 6.45312 6.67001 7.12048 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.052 4.052 3 Si 0.759 3.241 4 C -0.180 4.180 5 C 0.071 3.929 6 N -0.467 5.467 7 C 0.087 3.913 8 C 0.496 3.504 9 O -0.565 6.565 10 N -0.696 5.696 11 C 0.114 3.886 12 H 0.083 0.917 13 C -0.148 4.148 14 C -0.138 4.138 15 H 0.107 0.893 16 C 0.061 3.939 17 F -0.241 7.241 18 C -0.122 4.122 19 C 0.091 3.909 20 C -0.134 4.134 21 C -0.106 4.106 22 C -0.153 4.153 23 C -0.087 4.087 24 C -0.119 4.119 25 H 0.390 0.610 26 H 0.074 0.926 27 H -0.282 1.282 28 H -0.279 1.279 29 H 0.191 0.809 30 H 0.158 0.842 31 H 0.145 0.855 32 H 0.419 0.581 33 H 0.095 0.905 34 H 0.064 0.936 35 H 0.092 0.908 36 H 0.086 0.914 37 H 0.093 0.907 38 H 0.109 0.891 39 H 0.134 0.866 40 H 0.148 0.852 41 H 0.139 0.861 42 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.534 -0.300 5.437 6.006 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.160 4.160 3 Si 0.662 3.338 4 C -0.187 4.187 5 C -0.054 4.054 6 N -0.150 5.150 7 C -0.037 4.037 8 C 0.281 3.719 9 O -0.443 6.443 10 N -0.349 5.349 11 C 0.008 3.992 12 H 0.101 0.899 13 C -0.187 4.187 14 C -0.157 4.157 15 H 0.125 0.875 16 C 0.006 3.994 17 F -0.222 7.222 18 C -0.160 4.160 19 C -0.014 4.014 20 C -0.154 4.154 21 C -0.125 4.125 22 C -0.172 4.172 23 C -0.106 4.106 24 C -0.123 4.123 25 H 0.239 0.761 26 H 0.092 0.908 27 H -0.208 1.208 28 H -0.205 1.205 29 H 0.208 0.792 30 H 0.175 0.825 31 H 0.163 0.837 32 H 0.257 0.743 33 H 0.113 0.887 34 H 0.082 0.918 35 H 0.111 0.889 36 H 0.104 0.896 37 H 0.111 0.889 38 H 0.128 0.872 39 H 0.152 0.848 40 H 0.165 0.835 41 H 0.157 0.843 42 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 2.920 0.130 5.547 6.270 hybrid contribution -1.255 0.062 -0.428 1.327 sum 1.665 0.192 5.119 5.386 Atomic orbital electron populations 1.86590 1.19098 1.80681 1.50547 1.24330 0.83419 1.11494 0.96774 0.94111 0.90530 0.71487 0.77682 1.19752 1.09902 0.91524 0.97495 1.21904 0.99990 0.94983 0.88541 1.43408 1.52398 1.03916 1.15243 1.21966 0.89035 1.08787 0.83929 1.21350 0.90347 0.76220 0.83969 1.90800 1.75319 1.48147 1.29998 1.45498 1.06151 1.70970 1.12275 1.21810 0.79738 0.97798 0.99808 0.89905 1.23528 1.01595 0.97634 0.95932 1.23213 0.98689 0.97775 0.96025 0.87527 1.22287 0.98811 0.76000 1.02300 1.92739 1.97805 1.36648 1.95013 1.23249 1.02510 0.94867 0.95337 1.18422 1.01715 0.86987 0.94260 1.20261 1.04741 0.88932 1.01491 1.21154 0.98026 0.99020 0.94299 1.20939 1.02296 0.96991 0.96952 1.20457 0.98992 0.91595 0.99528 1.19365 1.04260 0.93691 0.94966 0.76058 0.90796 1.20845 1.20529 0.79182 0.82485 0.83748 0.74295 0.88659 0.91755 0.88945 0.89580 0.88854 0.87239 0.84769 0.83456 0.84307 0.86055 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.85 12.86 -148.98 -1.92 -5.76 16 2 C -0.05 -0.26 3.05 71.24 0.22 -0.04 16 3 Si 0.76 0.45 30.79 68.60 2.11 2.56 16 4 C -0.18 -1.57 5.61 -18.63 -0.10 -1.68 16 5 C 0.07 0.35 9.89 83.00 0.82 1.17 16 6 N -0.47 -1.89 2.27 -519.99 -1.18 -3.07 16 7 C 0.09 -0.47 6.48 85.63 0.56 0.08 16 8 C 0.50 -0.30 7.90 87.66 0.69 0.39 16 9 O -0.57 -5.97 16.02 -3.04 -0.05 -6.02 16 10 N -0.70 4.70 5.26 -440.05 -2.32 2.38 16 11 C 0.11 -0.52 4.32 45.52 0.20 -0.33 16 12 H 0.08 0.08 7.46 -2.39 -0.02 0.06 16 13 C -0.15 0.67 7.43 31.12 0.23 0.90 16 14 C -0.14 1.07 3.97 -10.27 -0.04 1.03 16 15 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 16 C 0.06 -0.35 7.39 71.98 0.53 0.18 16 17 F -0.24 -0.64 17.36 44.97 0.78 0.14 16 18 C -0.12 1.18 7.39 31.12 0.23 1.41 16 19 C 0.09 0.80 6.80 39.03 0.27 1.07 16 20 C -0.13 -0.79 10.00 22.37 0.22 -0.56 16 21 C -0.11 -0.54 10.01 22.29 0.22 -0.31 16 22 C -0.15 -1.02 9.97 22.03 0.22 -0.80 16 23 C -0.09 -0.87 10.05 22.23 0.22 -0.65 16 24 C -0.12 -1.38 6.35 -20.20 -0.13 -1.51 16 25 H 0.39 -0.67 8.74 -74.06 -0.65 -1.32 16 26 H 0.07 0.25 7.96 -2.39 -0.02 0.23 16 27 H -0.28 -1.18 7.11 99.48 0.71 -0.47 16 28 H -0.28 -1.24 7.04 99.48 0.70 -0.54 16 29 H 0.19 -0.21 6.30 -2.91 -0.02 -0.23 16 30 H 0.16 -1.98 8.12 -2.39 -0.02 -2.00 16 31 H 0.14 -1.54 8.14 -2.39 -0.02 -1.56 16 32 H 0.42 -5.68 8.70 -92.70 -0.81 -6.49 16 33 H 0.09 -0.43 7.90 -2.39 -0.02 -0.45 16 34 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 35 H 0.09 -0.82 8.14 -2.39 -0.02 -0.84 16 36 H 0.09 -0.66 7.84 -2.39 -0.02 -0.68 16 37 H 0.09 -1.10 8.14 -2.39 -0.02 -1.12 16 38 H 0.11 -1.19 8.10 -2.38 -0.02 -1.21 16 39 H 0.13 0.09 8.06 -2.91 -0.02 0.07 16 40 H 0.15 -0.07 8.06 -2.91 -0.02 -0.10 16 41 H 0.14 0.29 8.06 -2.91 -0.02 0.27 16 42 H 0.12 0.98 8.06 -2.91 -0.02 0.96 16 Total: 0.00 -27.36 359.39 1.42 -25.94 By element: Atomic # 1 Polarization: -16.15 SS G_CDS: -0.37 Total: -16.52 kcal Atomic # 6 Polarization: -4.01 SS G_CDS: 4.36 Total: 0.35 kcal Atomic # 7 Polarization: 2.80 SS G_CDS: -3.50 Total: -0.69 kcal Atomic # 8 Polarization: -9.82 SS G_CDS: -1.96 Total: -11.78 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.78 Total: 0.14 kcal Atomic # 14 Polarization: 0.45 SS G_CDS: 2.11 Total: 2.56 kcal Total: -27.36 1.42 -25.94 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15781660_9818708.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.419 kcal (2) G-P(sol) polarization free energy of solvation -27.360 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.941 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.422 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.938 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.519 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds