Wall clock time and date at job start Tue Mar 9 2021 12:59:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42908 * 1 3 3 C 1.35895 * 117.00059 * 2 1 4 4 C 1.38712 * 120.05341 * 180.02562 * 3 2 1 5 5 C 1.50694 * 120.02997 * 359.97438 * 4 3 2 6 6 H 1.09004 * 112.85170 * 10.91775 * 5 4 3 7 7 C 1.53778 * 113.61739 * 142.23100 * 5 4 3 8 8 C 1.53778 * 87.08449 * 139.98049 * 7 5 4 9 9 H 1.08993 * 113.61229 * 220.02023 * 8 7 5 10 10 N 1.46501 * 113.61560 * 89.11214 * 8 7 5 11 11 C 1.34781 * 119.99552 * 107.49938 * 10 8 7 12 12 O 1.21273 * 120.00172 * 0.02562 * 11 10 8 13 13 C 1.50702 * 119.99750 * 179.97438 * 11 10 8 14 14 N 1.46499 * 109.46881 * 180.02562 * 13 11 10 15 15 C 1.36832 * 125.06370 * 265.02270 * 14 13 11 16 16 C 1.34231 * 109.93730 * 180.02562 * 15 14 13 17 17 C 1.50701 * 126.49922 * 180.02562 * 16 15 14 18 18 O 1.42901 * 109.47307 * 105.02571 * 17 16 15 19 19 Si 1.86302 * 109.47287 * 345.02583 * 17 16 15 20 20 C 1.46488 * 107.00251 * 359.97438 * 16 15 14 21 21 C 1.39598 * 134.03888 * 179.97438 * 20 16 15 22 22 C 1.36660 * 119.76017 * 179.23993 * 21 20 16 23 23 C 1.38795 * 120.53364 * 0.66376 * 22 21 20 24 24 C 1.37792 * 120.66158 * 359.57321 * 23 22 21 25 25 C 1.37691 * 125.06113 * 84.72481 * 14 13 11 26 26 C 1.53784 * 87.08081 * 334.56700 * 8 7 5 27 27 C 1.38175 * 119.94305 * 179.72290 * 4 3 2 28 28 C 1.38248 * 120.05090 * 0.27341 * 27 4 3 29 29 C 1.38285 * 120.11640 * 359.97438 * 28 27 4 30 30 C 1.38123 * 120.05382 * 0.02562 * 29 28 27 31 31 H 1.08999 * 109.47200 * 300.00683 * 1 2 3 32 32 H 1.09007 * 109.46707 * 60.00614 * 1 2 3 33 33 H 1.08993 * 109.47371 * 179.97438 * 1 2 3 34 34 H 1.08999 * 113.61111 * 254.53112 * 7 5 4 35 35 H 1.09004 * 113.61682 * 25.42509 * 7 5 4 36 36 H 0.96998 * 120.00259 * 287.50678 * 10 8 7 37 37 H 1.09000 * 109.47285 * 300.00722 * 13 11 10 38 38 H 1.08993 * 109.46779 * 60.00471 * 13 11 10 39 39 H 1.07997 * 125.02999 * 359.97438 * 15 14 13 40 40 H 1.08996 * 109.47626 * 225.02307 * 17 16 15 41 41 H 0.96703 * 113.99457 * 300.00151 * 18 17 16 42 42 H 1.48496 * 110.00146 * 180.02562 * 19 17 16 43 43 H 1.48506 * 109.99509 * 301.31826 * 19 17 16 44 44 H 1.07997 * 120.11269 * 359.97438 * 21 20 16 45 45 H 1.08003 * 119.73379 * 180.21062 * 22 21 20 46 46 H 1.07994 * 119.67141 * 179.59770 * 23 22 21 47 47 H 1.07992 * 120.11422 * 180.02562 * 24 23 22 48 48 H 1.09004 * 113.61451 * 270.88641 * 26 8 7 49 49 H 1.08994 * 113.61477 * 139.97943 * 26 8 7 50 50 H 1.07997 * 119.97021 * 180.24974 * 27 4 3 51 51 H 1.07999 * 119.93696 * 179.97438 * 28 27 4 52 52 H 1.08000 * 119.97178 * 180.02562 * 29 28 27 53 53 H 1.08001 * 120.02850 * 179.97438 * 30 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4312 1.2847 -0.0005 5 6 4.2538 0.0221 -0.0005 6 1 3.6583 -0.8710 -0.1903 7 6 5.5229 0.1136 -0.8640 8 6 6.2417 -0.6669 0.2491 9 1 7.2516 -0.3097 0.4505 10 7 6.1733 -2.1210 0.0845 11 6 7.2703 -2.8092 -0.2892 12 8 8.3140 -2.2248 -0.4887 13 6 7.2001 -4.3051 -0.4580 14 7 8.5127 -4.8127 -0.8650 15 6 8.9010 -5.0414 -2.1570 16 6 10.1606 -5.5045 -2.1811 17 6 10.9553 -5.8770 -3.4062 18 8 11.9248 -4.8614 -3.6721 19 14 9.8083 -6.0380 -4.8654 20 6 10.6167 -5.5780 -0.7910 21 6 11.8080 -5.9738 -0.1802 22 6 11.9272 -5.9089 1.1796 23 6 10.8685 -5.4655 1.9599 24 6 9.6821 -5.0747 1.3781 25 6 9.5413 -5.1251 -0.0047 26 6 5.1856 -0.1061 1.2161 27 6 4.0561 2.5170 -0.0063 28 6 3.3020 3.6757 -0.0059 29 6 1.9210 3.6047 -0.0002 30 6 1.2915 2.3753 0.0056 31 1 -0.3633 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8901 33 1 -0.3634 -1.0276 -0.0005 34 1 5.4515 -0.4329 -1.8044 35 1 5.8917 1.1314 -0.9918 36 1 5.3386 -2.5885 0.2443 37 1 6.9104 -4.7642 0.4872 38 1 6.4625 -4.5502 -1.2221 39 1 8.2849 -4.8747 -3.0282 40 1 11.4619 -6.8270 -3.2358 41 1 11.5443 -3.9872 -3.8338 42 1 10.5798 -6.4057 -6.0797 43 1 8.7759 -7.0689 -4.5885 44 1 12.6364 -6.3187 -0.7811 45 1 12.8502 -6.2120 1.6515 46 1 10.9757 -5.4260 3.0338 47 1 8.8642 -4.7308 1.9937 48 1 5.4621 0.8517 1.6571 49 1 4.8420 -0.8299 1.9550 50 1 5.1345 2.5750 -0.0108 51 1 3.7924 4.6379 -0.0100 52 1 1.3341 4.5114 -0.0002 53 1 0.2129 2.3203 0.0105 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_15784314_9818708.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:35 Heat of formation + Delta-G solvation = 27.298190 kcal Electronic energy + Delta-G solvation = -35697.548967 eV Core-core repulsion = 31082.000091 eV Total energy + Delta-G solvation = -4615.548876 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 393.177 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -42.53355 -41.69318 -40.74207 -39.36829 -38.12369 -38.01246 -37.55966 -34.69355 -33.98108 -31.99738 -31.30373 -31.03990 -30.23031 -28.95947 -28.11968 -26.66903 -26.33787 -25.51407 -23.80702 -23.21847 -22.81960 -22.47244 -21.76951 -20.66034 -20.09630 -19.12764 -18.57074 -18.41350 -17.71959 -17.32825 -17.25163 -16.82510 -16.64668 -16.60297 -16.41233 -16.26365 -15.97485 -15.56951 -15.39162 -15.31265 -15.15169 -14.93384 -14.77231 -14.70027 -14.40104 -14.28198 -14.04728 -14.00916 -13.67461 -13.48684 -13.27889 -13.01753 -12.97224 -12.75088 -12.71909 -12.56435 -12.28560 -12.23477 -12.11131 -12.01059 -11.80714 -11.73001 -11.63079 -11.14905 -11.11911 -10.54891 -10.29713 -10.11387 -9.75169 -9.15582 -9.06260 -8.62359 -4.99170 0.14319 0.35256 0.49549 0.63272 1.37292 1.41516 1.48174 1.69165 1.71976 2.00408 2.21388 2.39005 2.76914 2.94383 3.50228 3.57713 3.64234 3.67384 3.69546 3.74411 3.77203 3.89507 3.93579 4.02353 4.06068 4.12191 4.17391 4.20806 4.21583 4.30296 4.33954 4.38174 4.46927 4.48113 4.50258 4.56403 4.66000 4.71763 4.72008 4.75382 4.78668 4.80475 4.85779 4.89148 4.97122 5.03655 5.11530 5.13251 5.19528 5.41613 5.48193 5.50339 5.60452 5.65722 5.68125 5.73361 5.75583 5.86037 6.20570 6.24199 6.45000 6.50157 6.82734 7.16632 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.328 6.328 3 C 0.114 3.886 4 C -0.116 4.116 5 C -0.055 4.055 6 H 0.104 0.896 7 C -0.139 4.139 8 C 0.121 3.879 9 H 0.083 0.917 10 N -0.695 5.695 11 C 0.496 3.504 12 O -0.567 6.567 13 C 0.087 3.913 14 N -0.466 5.466 15 C 0.080 3.920 16 C -0.225 4.225 17 C -0.046 4.046 18 O -0.564 6.564 19 Si 0.793 3.207 20 C -0.117 4.117 21 C -0.091 4.091 22 C -0.154 4.154 23 C -0.109 4.109 24 C -0.133 4.133 25 C 0.090 3.910 26 C -0.126 4.126 27 C -0.087 4.087 28 C -0.164 4.164 29 C -0.094 4.094 30 C -0.218 4.218 31 H 0.060 0.940 32 H 0.059 0.941 33 H 0.117 0.883 34 H 0.070 0.930 35 H 0.095 0.905 36 H 0.419 0.581 37 H 0.142 0.858 38 H 0.165 0.835 39 H 0.208 0.792 40 H 0.092 0.908 41 H 0.390 0.610 42 H -0.301 1.301 43 H -0.274 1.274 44 H 0.116 0.884 45 H 0.135 0.865 46 H 0.145 0.855 47 H 0.133 0.867 48 H 0.097 0.903 49 H 0.083 0.917 50 H 0.142 0.858 51 H 0.137 0.863 52 H 0.139 0.861 53 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.789 2.113 1.187 11.058 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 O -0.242 6.242 3 C 0.068 3.932 4 C -0.117 4.117 5 C -0.074 4.074 6 H 0.122 0.878 7 C -0.178 4.178 8 C 0.015 3.985 9 H 0.101 0.899 10 N -0.348 5.348 11 C 0.281 3.719 12 O -0.445 6.445 13 C -0.037 4.037 14 N -0.148 5.148 15 C -0.046 4.046 16 C -0.233 4.233 17 C -0.155 4.155 18 O -0.372 6.372 19 Si 0.697 3.303 20 C -0.122 4.122 21 C -0.110 4.110 22 C -0.173 4.173 23 C -0.128 4.128 24 C -0.154 4.154 25 C -0.015 4.015 26 C -0.164 4.164 27 C -0.105 4.105 28 C -0.183 4.183 29 C -0.112 4.112 30 C -0.236 4.236 31 H 0.078 0.922 32 H 0.078 0.922 33 H 0.135 0.865 34 H 0.089 0.911 35 H 0.113 0.887 36 H 0.256 0.744 37 H 0.159 0.841 38 H 0.183 0.817 39 H 0.225 0.775 40 H 0.109 0.891 41 H 0.240 0.760 42 H -0.229 1.229 43 H -0.201 1.201 44 H 0.134 0.866 45 H 0.153 0.847 46 H 0.163 0.837 47 H 0.151 0.849 48 H 0.115 0.885 49 H 0.102 0.898 50 H 0.159 0.841 51 H 0.155 0.845 52 H 0.156 0.844 53 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges -10.205 1.419 0.603 10.321 hybrid contribution -0.013 -0.095 0.654 0.661 sum -10.218 1.324 1.256 10.380 Atomic orbital electron populations 1.23276 0.76962 1.05364 1.01852 1.86007 1.22785 1.26686 1.88690 1.19079 0.92278 0.84689 0.97121 1.19267 0.90298 0.96082 1.06037 1.21343 0.93637 0.95366 0.97008 0.87770 1.23542 0.95126 1.01337 0.97776 1.21753 0.99462 0.80119 0.97174 0.89904 1.45506 1.13138 1.07119 1.69028 1.21391 0.83505 0.90721 0.76238 1.90801 1.31288 1.71486 1.50876 1.21984 0.84134 0.89964 1.07624 1.43448 1.11720 1.54831 1.04844 1.22072 0.95618 0.99702 0.87168 1.20795 0.95945 1.13082 0.93436 1.24688 0.96696 0.92700 1.01452 1.86441 1.35680 1.21907 1.93126 0.93984 0.77142 0.86485 0.72650 1.19376 0.94582 1.04685 0.93530 1.20441 0.96002 0.99425 0.95097 1.20908 1.00110 1.02852 0.93402 1.21124 0.92293 0.98593 1.00760 1.20256 0.99676 1.04777 0.90648 1.18392 0.88678 1.02065 0.92335 1.23376 0.94449 1.02333 0.96248 1.21098 1.00766 0.90994 0.97622 1.21353 0.94178 0.99249 1.03472 1.21248 0.95160 0.97623 0.97176 1.21495 1.00907 0.92496 1.08746 0.92160 0.92213 0.86478 0.91103 0.88702 0.74352 0.84061 0.81733 0.77529 0.89062 0.76028 1.22885 1.20066 0.86626 0.84676 0.83702 0.84903 0.88472 0.89795 0.84077 0.84487 0.84363 0.84321 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.00 16 2 O -0.33 -0.12 9.43 -92.37 -0.87 -0.99 16 3 C 0.11 0.21 6.66 22.51 0.15 0.36 16 4 C -0.12 -0.05 5.30 -19.77 -0.10 -0.15 16 5 C -0.06 0.18 3.75 -11.01 -0.04 0.14 16 6 H 0.10 -0.39 7.32 -2.39 -0.02 -0.40 16 7 C -0.14 0.43 7.25 31.12 0.23 0.66 16 8 C 0.12 -0.35 4.32 45.52 0.20 -0.15 16 9 H 0.08 0.19 7.47 -2.39 -0.02 0.17 16 10 N -0.69 4.28 5.26 -440.04 -2.32 1.97 16 11 C 0.50 -0.59 7.90 87.66 0.69 0.11 16 12 O -0.57 -5.74 16.02 -3.01 -0.05 -5.79 16 13 C 0.09 -0.62 6.48 85.63 0.56 -0.06 16 14 N -0.47 -0.83 2.27 -520.00 -1.18 -2.01 16 15 C 0.08 0.07 9.89 83.00 0.82 0.89 16 16 C -0.23 -1.41 5.58 -18.63 -0.10 -1.51 16 17 C -0.05 -0.22 3.06 71.24 0.22 0.00 16 18 O -0.56 -3.89 12.88 -148.98 -1.92 -5.81 16 19 Si 0.79 -0.66 30.75 68.60 2.11 1.44 16 20 C -0.12 -1.28 6.35 -20.20 -0.13 -1.41 16 21 C -0.09 -0.99 10.05 22.23 0.22 -0.77 16 22 C -0.15 -1.20 9.97 22.03 0.22 -0.98 16 23 C -0.11 -0.63 10.01 22.30 0.22 -0.41 16 24 C -0.13 -0.80 10.00 22.37 0.22 -0.58 16 25 C 0.09 0.72 6.80 39.03 0.27 0.98 16 26 C -0.13 0.60 7.29 31.12 0.23 0.83 16 27 C -0.09 0.05 8.61 22.26 0.19 0.24 16 28 C -0.16 0.07 10.04 22.28 0.22 0.29 16 29 C -0.09 0.02 10.04 22.25 0.22 0.24 16 30 C -0.22 -0.12 9.04 22.37 0.20 0.09 16 31 H 0.06 -0.39 7.65 -2.39 -0.02 -0.41 16 32 H 0.06 -0.38 7.68 -2.38 -0.02 -0.40 16 33 H 0.12 -1.08 8.14 -2.39 -0.02 -1.10 16 34 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 35 H 0.09 -0.29 6.31 -2.38 -0.02 -0.31 16 36 H 0.42 -5.22 8.70 -92.71 -0.81 -6.03 16 37 H 0.14 -1.64 8.14 -2.39 -0.02 -1.66 16 38 H 0.17 -2.53 8.12 -2.39 -0.02 -2.55 16 39 H 0.21 -1.66 6.34 -2.91 -0.02 -1.68 16 40 H 0.09 0.66 7.96 -2.39 -0.02 0.64 16 41 H 0.39 -0.22 8.70 -74.05 -0.64 -0.86 16 42 H -0.30 -2.05 7.11 99.48 0.71 -1.34 16 43 H -0.27 -0.62 7.11 99.48 0.71 0.08 16 44 H 0.12 1.18 8.06 -2.91 -0.02 1.16 16 45 H 0.14 0.50 8.06 -2.91 -0.02 0.47 16 46 H 0.15 0.09 8.06 -2.91 -0.02 0.06 16 47 H 0.13 0.15 8.06 -2.91 -0.02 0.12 16 48 H 0.10 -0.42 7.72 -2.39 -0.02 -0.44 16 49 H 0.08 -0.51 8.14 -2.39 -0.02 -0.53 16 50 H 0.14 -0.54 6.66 -2.91 -0.02 -0.56 16 51 H 0.14 -0.52 8.06 -2.91 -0.02 -0.54 16 52 H 0.14 -0.54 8.06 -2.91 -0.02 -0.56 16 53 H 0.14 -0.41 6.30 -2.91 -0.02 -0.43 16 Total: 0.00 -29.79 436.87 1.14 -28.65 By element: Atomic # 1 Polarization: -16.80 SS G_CDS: -0.46 Total: -17.25 kcal Atomic # 6 Polarization: -6.02 SS G_CDS: 5.82 Total: -0.20 kcal Atomic # 7 Polarization: 3.45 SS G_CDS: -3.50 Total: -0.05 kcal Atomic # 8 Polarization: -9.75 SS G_CDS: -2.84 Total: -12.59 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: 2.11 Total: 1.44 kcal Total: -29.79 1.14 -28.65 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_15784314_9818708.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 55.948 kcal (2) G-P(sol) polarization free energy of solvation -29.786 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.136 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.650 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds