Wall clock time and date at job start Tue Mar 9 2021 12:56:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.47393 * 2 1 4 4 C 1.50704 * 109.46649 * 120.00051 * 2 1 3 5 5 C 1.31114 * 118.54295 * 249.99836 * 4 2 1 6 6 N 1.38928 * 121.84889 * 179.61594 * 5 4 2 7 7 C 1.47032 * 118.88052 * 13.31520 * 6 5 4 8 8 C 1.53539 * 107.65894 * 316.33567 * 7 6 5 9 9 C 1.50201 * 118.54954 * 70.01914 * 4 2 1 10 10 C 1.50699 * 109.32932 * 320.11959 * 9 4 2 11 11 O 1.21284 * 119.99652 * 240.00029 * 10 9 4 12 12 N 1.34777 * 120.00148 * 59.99924 * 10 9 4 13 13 C 1.46504 * 119.99889 * 180.02562 * 12 10 9 14 14 C 1.52995 * 109.46865 * 179.97438 * 13 12 10 15 15 F 1.39900 * 112.85094 * 316.19430 * 14 13 12 16 16 C 1.53785 * 113.61521 * 87.49976 * 14 13 12 17 17 C 1.53789 * 87.07892 * 139.97916 * 16 14 13 18 18 H 1.09002 * 113.68739 * 89.12576 * 17 16 14 19 19 C 1.52997 * 113.61452 * 220.01664 * 17 16 14 20 20 O 1.42897 * 109.47362 * 272.50393 * 19 17 16 21 21 C 1.53777 * 87.08200 * 334.56743 * 17 16 14 22 22 H 0.96696 * 113.99892 * 300.00429 * 1 2 3 23 23 H 1.08999 * 109.47282 * 239.99479 * 2 1 3 24 24 H 1.48498 * 109.99609 * 299.99854 * 3 2 1 25 25 H 1.48503 * 109.99993 * 61.31432 * 3 2 1 26 26 H 1.08000 * 119.07878 * 359.34392 * 5 4 2 27 27 H 0.97001 * 120.55994 * 193.28880 * 6 5 4 28 28 H 1.08996 * 109.81932 * 196.79363 * 7 6 5 29 29 H 1.09001 * 109.87373 * 75.90535 * 7 6 5 30 30 H 1.08998 * 109.62331 * 301.22456 * 8 7 6 31 31 H 1.08997 * 109.62101 * 180.67083 * 8 7 6 32 32 H 1.09000 * 109.33086 * 79.77062 * 9 4 2 33 33 H 0.97003 * 120.00106 * 359.97438 * 12 10 9 34 34 H 1.09005 * 109.46821 * 299.99509 * 13 12 10 35 35 H 1.08997 * 109.47109 * 59.99435 * 13 12 10 36 36 H 1.09003 * 113.61619 * 254.52434 * 16 14 13 37 37 H 1.09000 * 113.61089 * 25.43307 * 16 14 13 38 38 H 1.09000 * 109.46729 * 32.49893 * 19 17 16 39 39 H 1.09003 * 109.47227 * 152.49924 * 19 17 16 40 40 H 0.96699 * 114.00216 * 180.02562 * 20 19 17 41 41 H 1.08996 * 113.61692 * 270.88442 * 21 17 16 42 42 H 1.09002 * 113.61715 * 139.97957 * 21 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7105 1.2305 5 6 2.5115 -0.0028 2.1695 6 7 2.9925 -0.5858 3.3352 7 6 3.1181 -2.0494 3.3978 8 6 1.8464 -2.6527 2.7845 9 6 1.7454 -2.1978 1.3268 10 6 0.3883 -2.5670 0.7855 11 8 -0.4187 -3.1231 1.5000 12 7 0.0714 -2.2792 -0.4925 13 6 -1.2482 -2.6377 -1.0184 14 6 -1.3493 -2.2025 -2.4817 15 9 -0.8362 -0.9200 -2.7038 16 6 -0.8309 -3.2559 -3.4749 17 6 -2.0197 -2.8784 -4.3745 18 1 -1.8039 -2.0646 -5.0668 19 6 -2.6782 -4.0794 -5.0561 20 8 -2.0094 -4.3533 -6.2889 21 6 -2.7420 -2.4236 -3.0953 22 1 -0.3933 0.4417 0.7650 23 1 1.7924 -0.5139 -0.8899 24 1 1.5616 2.4678 -1.2085 25 1 1.5879 2.4586 1.2242 26 1 2.6225 1.0625 2.0311 27 1 3.2416 -0.0365 4.0949 28 1 3.2151 -2.3680 4.4356 29 1 3.9910 -2.3710 2.8295 30 1 0.9734 -2.3061 3.3375 31 1 1.9008 -3.7405 2.8255 32 1 2.5161 -2.6965 0.7390 33 1 0.7167 -1.8341 -1.0638 34 1 -1.3859 -3.7168 -0.9496 35 1 -2.0203 -2.1350 -0.4360 36 1 0.1391 -3.0089 -3.9067 37 1 -0.8784 -4.2760 -3.0938 38 1 -2.6090 -4.9501 -4.4041 39 1 -3.7266 -3.8556 -5.2534 40 1 -2.3750 -5.1041 -6.7764 41 1 -3.3119 -3.2161 -2.6104 42 1 -3.3148 -1.5047 -3.2205 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16500592_15608500.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:02 Heat of formation + Delta-G solvation = -100.249122 kcal Electronic energy + Delta-G solvation = -26362.467672 eV Core-core repulsion = 22453.280697 eV Total energy + Delta-G solvation = -3909.186975 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 301.152 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -48.59689 -41.36036 -39.90200 -39.01957 -37.69375 -37.16874 -35.16253 -33.49296 -32.73810 -30.18418 -27.67254 -27.09404 -26.86564 -25.38281 -23.23947 -22.14546 -21.53159 -20.62293 -19.41516 -19.00284 -18.31804 -18.05279 -17.41600 -17.22689 -16.79216 -16.42648 -16.25891 -16.16188 -15.92619 -15.48567 -15.43036 -15.11002 -14.91190 -14.62918 -14.35950 -14.22596 -13.87397 -13.77489 -13.54698 -13.31794 -13.14990 -13.06798 -12.68809 -12.31507 -12.12148 -11.91206 -11.86669 -11.58995 -11.47513 -11.41249 -11.23782 -10.89544 -10.51078 -10.33276 -9.66938 -8.53301 -4.91372 1.23268 1.36683 1.59607 1.98028 2.07304 2.37320 2.52351 3.00995 3.16889 3.24401 3.44593 3.50378 3.56230 3.67097 3.78090 3.79120 4.02389 4.21554 4.24876 4.27996 4.32263 4.38519 4.45074 4.49876 4.54412 4.56612 4.57829 4.65650 4.71053 4.76463 4.81082 4.85072 4.95099 5.01471 5.18310 5.30685 5.37204 5.39964 5.68084 6.22917 6.56407 6.63805 6.75423 6.78544 7.52786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.518 6.518 2 C -0.055 4.055 3 Si 0.670 3.330 4 C -0.280 4.280 5 C 0.153 3.847 6 N -0.747 5.747 7 C 0.119 3.881 8 C -0.119 4.119 9 C -0.039 4.039 10 C 0.532 3.468 11 O -0.552 6.552 12 N -0.702 5.702 13 C 0.121 3.879 14 C 0.086 3.914 15 F -0.178 7.178 16 C -0.147 4.147 17 C -0.108 4.108 18 H 0.104 0.896 19 C 0.086 3.914 20 O -0.573 6.573 21 C -0.144 4.144 22 H 0.368 0.632 23 H 0.105 0.895 24 H -0.259 1.259 25 H -0.266 1.266 26 H 0.134 0.866 27 H 0.403 0.597 28 H 0.082 0.918 29 H 0.064 0.936 30 H 0.079 0.921 31 H 0.080 0.920 32 H 0.095 0.905 33 H 0.403 0.597 34 H 0.079 0.921 35 H 0.076 0.924 36 H 0.083 0.917 37 H 0.100 0.900 38 H 0.049 0.951 39 H 0.049 0.951 40 H 0.381 0.619 41 H 0.103 0.897 42 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.291 -0.928 0.442 3.448 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.324 6.324 2 C -0.166 4.166 3 Si 0.573 3.427 4 C -0.291 4.291 5 C 0.031 3.969 6 N -0.377 5.377 7 C -0.005 4.005 8 C -0.158 4.158 9 C -0.060 4.060 10 C 0.319 3.681 11 O -0.430 6.430 12 N -0.355 5.355 13 C -0.004 4.004 14 C 0.067 3.933 15 F -0.158 7.158 16 C -0.185 4.185 17 C -0.127 4.127 18 H 0.122 0.878 19 C 0.008 3.992 20 O -0.379 6.379 21 C -0.182 4.182 22 H 0.215 0.785 23 H 0.123 0.877 24 H -0.184 1.184 25 H -0.191 1.191 26 H 0.151 0.849 27 H 0.237 0.763 28 H 0.100 0.900 29 H 0.082 0.918 30 H 0.097 0.903 31 H 0.098 0.902 32 H 0.113 0.887 33 H 0.241 0.759 34 H 0.097 0.903 35 H 0.094 0.906 36 H 0.102 0.898 37 H 0.118 0.882 38 H 0.067 0.933 39 H 0.068 0.932 40 H 0.228 0.772 41 H 0.121 0.879 42 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 2.980 -0.397 0.554 3.057 hybrid contribution -1.084 0.011 0.285 1.121 sum 1.896 -0.386 0.839 2.109 Atomic orbital electron populations 1.86788 1.17565 1.79048 1.48966 1.24648 0.84408 1.09605 0.97979 0.95417 0.92120 0.75420 0.79763 1.20566 1.13176 0.94733 1.00661 1.20516 0.92855 0.96831 0.86726 1.44603 1.71789 1.06509 1.14808 1.21656 0.97352 0.80047 1.01475 1.21715 0.98681 1.01086 0.94302 1.19691 0.94867 0.93801 0.97692 1.20323 0.89059 0.77470 0.81282 1.90689 1.51457 1.43116 1.57758 1.45846 1.16159 1.60803 1.12719 1.21611 0.86925 1.00557 0.91290 1.21972 0.96248 0.80406 0.94661 1.92895 1.87849 1.39427 1.95634 1.23728 0.99840 0.99104 0.95815 1.22504 0.96264 0.98448 0.95464 0.87823 1.22150 0.95120 0.96409 0.85543 1.86490 1.61032 1.55082 1.35268 1.23557 0.95625 1.03452 0.95567 0.78524 0.87712 1.18441 1.19137 0.84938 0.76272 0.89974 0.91822 0.90271 0.90187 0.88738 0.75856 0.90255 0.90603 0.89846 0.88163 0.93258 0.93240 0.77158 0.87872 0.89425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.57 9.40 -35.23 -0.33 -0.90 16 2 C -0.06 0.04 1.74 36.01 0.06 0.10 16 3 Si 0.67 -0.63 29.95 -169.99 -5.09 -5.72 16 4 C -0.28 0.15 5.14 -101.34 -0.52 -0.37 16 5 C 0.15 -0.19 9.62 -16.08 -0.15 -0.34 16 6 N -0.75 1.42 5.83 -60.68 -0.35 1.07 16 7 C 0.12 -0.23 7.16 -3.47 -0.02 -0.25 16 8 C -0.12 -0.04 4.91 -26.43 -0.13 -0.17 16 9 C -0.04 -0.02 2.75 -93.15 -0.26 -0.27 16 10 C 0.53 1.59 6.36 -10.99 -0.07 1.52 16 11 O -0.55 -3.75 15.78 5.55 0.09 -3.66 16 12 N -0.70 -0.98 3.11 -60.29 -0.19 -1.16 16 13 C 0.12 0.15 5.38 -4.04 -0.02 0.12 16 14 C 0.09 0.04 1.74 -89.81 -0.16 -0.12 16 15 F -0.18 -0.52 16.52 2.25 0.04 -0.49 16 16 C -0.15 0.04 7.08 -25.91 -0.18 -0.15 16 17 C -0.11 0.00 3.99 -89.81 -0.36 -0.36 16 18 H 0.10 0.15 8.14 -51.93 -0.42 -0.27 16 19 C 0.09 -0.06 6.88 37.16 0.26 0.19 16 20 O -0.57 -0.43 13.66 -35.23 -0.48 -0.91 16 21 C -0.14 0.11 7.10 -25.92 -0.18 -0.08 16 22 H 0.37 -0.02 8.70 45.56 0.40 0.37 16 23 H 0.11 -0.15 6.41 -51.93 -0.33 -0.48 16 24 H -0.26 -0.80 7.11 56.52 0.40 -0.40 16 25 H -0.27 -0.27 6.84 56.52 0.39 0.12 16 26 H 0.13 -0.32 4.30 -52.49 -0.23 -0.54 16 27 H 0.40 -1.44 8.96 -40.82 -0.37 -1.80 16 28 H 0.08 -0.25 8.14 -51.93 -0.42 -0.68 16 29 H 0.06 -0.15 8.14 -51.93 -0.42 -0.58 16 30 H 0.08 0.22 7.74 -51.93 -0.40 -0.18 16 31 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 32 H 0.09 -0.08 8.14 -51.93 -0.42 -0.51 16 33 H 0.40 0.22 4.97 -40.82 -0.20 0.01 16 34 H 0.08 0.07 7.84 -51.93 -0.41 -0.34 16 35 H 0.08 0.19 8.14 -51.93 -0.42 -0.23 16 36 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.10 -0.12 7.65 -51.93 -0.40 -0.52 16 38 H 0.05 -0.09 7.84 -51.93 -0.41 -0.50 16 39 H 0.05 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.38 -1.32 9.12 45.56 0.42 -0.91 16 41 H 0.10 -0.23 8.06 -51.93 -0.42 -0.65 16 42 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 LS Contribution 332.92 15.07 5.02 5.02 Total: 0.00 -8.37 332.92 -8.41 -16.78 By element: Atomic # 1 Polarization: -4.47 SS G_CDS: -5.37 Total: -9.83 kcal Atomic # 6 Polarization: 1.56 SS G_CDS: -1.74 Total: -0.18 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -0.54 Total: -0.10 kcal Atomic # 8 Polarization: -4.75 SS G_CDS: -0.72 Total: -5.47 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.04 Total: -0.49 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: -5.09 Total: -5.72 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -8.37 -8.41 -16.78 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16500592_15608500.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.474 kcal (2) G-P(sol) polarization free energy of solvation -8.365 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -91.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.410 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.775 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds