Wall clock time and date at job start Tue Mar 9 2021 13:04:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45198 * 109.47483 * 2 1 4 4 C 1.34224 * 117.00226 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00201 * 0.02562 * 4 3 2 6 6 C 1.50707 * 119.99832 * 179.97438 * 4 3 2 7 7 H 1.09005 * 112.90402 * 48.75296 * 6 4 3 8 8 C 1.53781 * 113.61202 * 180.02562 * 6 4 3 9 9 C 1.53777 * 87.08092 * 89.11818 * 8 6 4 10 10 F 1.39900 * 113.61551 * 270.79594 * 9 8 6 11 11 C 1.53002 * 113.61525 * 139.97791 * 9 8 6 12 12 N 1.46506 * 109.47035 * 179.97438 * 11 9 8 13 13 C 1.34777 * 119.99873 * 179.97438 * 12 11 9 14 14 O 1.21284 * 119.99754 * 0.02562 * 13 12 11 15 15 C 1.50696 * 120.00137 * 180.02562 * 13 12 11 16 16 N 1.46500 * 109.47324 * 180.02562 * 15 13 12 17 17 C 1.36834 * 125.06298 * 265.02611 * 16 15 13 18 18 C 1.34232 * 109.93687 * 179.97438 * 17 16 15 19 19 C 1.50708 * 126.49897 * 180.02562 * 18 17 16 20 20 O 1.42901 * 109.46849 * 254.97370 * 19 18 17 21 21 Si 1.86299 * 109.47079 * 14.97592 * 19 18 17 22 22 C 1.46495 * 107.00350 * 359.97438 * 18 17 16 23 23 C 1.39580 * 134.04074 * 180.02562 * 22 18 17 24 24 C 1.36664 * 119.76372 * 179.97438 * 23 22 18 25 25 C 1.38789 * 120.53295 * 0.02562 * 24 23 22 26 26 C 1.37784 * 120.65896 * 0.02562 * 25 24 23 27 27 C 1.37691 * 125.06222 * 84.71689 * 16 15 13 28 28 C 1.53776 * 113.61518 * 277.49879 * 6 4 3 29 29 H 1.09002 * 109.47002 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.46786 * 300.00129 * 1 2 3 31 31 H 1.08999 * 109.47049 * 59.99681 * 1 2 3 32 32 H 1.09003 * 109.47452 * 239.99854 * 2 1 3 33 33 H 1.08999 * 109.47049 * 120.00318 * 2 1 3 34 34 H 1.08999 * 113.61454 * 334.57083 * 8 6 4 35 35 H 1.09001 * 113.69285 * 203.67575 * 8 6 4 36 36 H 1.09004 * 109.46930 * 60.00138 * 11 9 8 37 37 H 1.09000 * 109.47312 * 300.00082 * 11 9 8 38 38 H 0.96999 * 120.00080 * 0.02562 * 12 11 9 39 39 H 1.09000 * 109.46978 * 300.00347 * 15 13 12 40 40 H 1.08996 * 109.47197 * 59.99985 * 15 13 12 41 41 H 1.08001 * 125.03157 * 359.96267 * 17 16 15 42 42 H 1.08996 * 109.47030 * 134.97853 * 19 18 17 43 43 H 0.96706 * 114.00001 * 60.00015 * 20 19 18 44 44 H 1.48497 * 110.00050 * 58.67989 * 21 19 18 45 45 H 1.48497 * 109.99986 * 180.02562 * 21 19 18 46 46 H 1.08004 * 120.11870 * 359.95290 * 23 22 18 47 47 H 1.08006 * 119.73714 * 180.02562 * 24 23 22 48 48 H 1.07991 * 119.66856 * 179.97438 * 25 24 23 49 49 H 1.08004 * 120.10895 * 180.02562 * 26 25 24 50 50 H 1.09002 * 113.61231 * 156.33891 * 28 6 4 51 51 H 1.08997 * 113.61864 * 25.43422 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.4708 3.5829 0.7544 8 6 5.4583 2.9680 0.0001 9 6 5.3806 2.9422 -1.5355 10 9 5.3600 1.6511 -2.0740 11 6 6.4036 3.8536 -2.2164 12 7 6.2506 3.7590 -3.6704 13 6 7.0507 4.4800 -4.4805 14 8 7.8978 5.2067 -4.0059 15 6 6.8929 4.3831 -5.9761 16 7 7.8726 5.2557 -6.6281 17 6 7.6311 6.5374 -7.0419 18 6 8.7377 7.0550 -7.5981 19 6 8.8871 8.4386 -8.1767 20 8 8.8908 8.3602 -9.6035 21 14 7.4642 9.5028 -7.6168 22 6 9.7730 6.0205 -7.5348 23 6 11.1070 5.9567 -7.9405 24 6 11.8254 4.8129 -7.7326 25 6 11.2391 3.7133 -7.1215 26 6 9.9235 3.7544 -6.7141 27 6 9.1753 4.9104 -6.9102 28 6 3.9870 3.5761 -1.3973 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8899 32 1 1.8934 -0.5139 -0.8900 33 1 1.8933 -0.5139 0.8899 34 1 5.9128 2.0751 0.4293 35 1 5.8780 3.8908 0.4005 36 1 7.4102 3.5428 -1.9364 37 1 6.2401 4.8837 -1.8998 38 1 5.5729 3.1780 -4.0499 39 1 7.0568 3.3531 -6.2928 40 1 5.8863 4.6934 -6.2561 41 1 6.6894 7.0557 -6.9368 42 1 9.8248 8.8762 -7.8344 43 1 8.0849 7.9795 -9.9787 44 1 7.4302 9.5662 -6.1336 45 1 7.5995 10.8697 -8.1812 46 1 11.5697 6.8082 -8.4174 47 1 12.8577 4.7642 -8.0463 48 1 11.8196 2.8164 -6.9644 49 1 9.4763 2.8937 -6.2391 50 1 4.0029 4.6658 -1.3789 51 1 3.2536 3.1742 -2.0963 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16501616_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:47 Heat of formation + Delta-G solvation = -98.020913 kcal Electronic energy + Delta-G solvation = -36189.882880 eV Core-core repulsion = 31165.442014 eV Total energy + Delta-G solvation = -5024.440866 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.167 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -48.96089 -42.48213 -41.82067 -40.69052 -39.31273 -37.99543 -37.57475 -37.41048 -35.77193 -34.06496 -32.79621 -31.58613 -30.33277 -30.10172 -28.63696 -27.38579 -26.36989 -25.43703 -23.93840 -23.57135 -22.64040 -22.43338 -21.76782 -20.69067 -20.57128 -19.15256 -18.59817 -18.47035 -17.80732 -17.73152 -17.59224 -17.38044 -17.09892 -16.94229 -16.62976 -16.32397 -16.23120 -15.99724 -15.75407 -15.34253 -15.19413 -15.12083 -14.81201 -14.70321 -14.62966 -14.47805 -14.35454 -14.13590 -13.93730 -13.85463 -13.66625 -13.55405 -13.25198 -13.23304 -12.99084 -12.80204 -12.58820 -12.58194 -12.46111 -12.11839 -12.01283 -11.80605 -11.67397 -11.66838 -11.58189 -11.46603 -11.15524 -10.42525 -10.39885 -10.22397 -9.02201 -8.52836 -5.03218 0.28106 0.79343 1.08134 1.32747 1.36249 1.41243 1.47834 1.65895 1.77674 2.01193 2.06053 2.68924 2.82562 2.98844 3.09358 3.12167 3.29253 3.45154 3.47659 3.65048 3.67537 3.75166 3.81539 3.86036 3.88555 3.93093 4.06647 4.08027 4.08965 4.19810 4.22705 4.31985 4.34791 4.37627 4.40780 4.45900 4.58075 4.61453 4.66889 4.71991 4.73395 4.79783 4.88443 4.90646 4.95021 4.98954 5.06390 5.26043 5.39611 5.65250 5.81158 5.86555 5.90221 6.06762 6.28600 6.36224 6.68388 6.75748 6.91395 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.062 3.938 3 O -0.356 6.356 4 C 0.474 3.526 5 O -0.489 6.489 6 C -0.113 4.113 7 H 0.127 0.873 8 C -0.133 4.133 9 C 0.078 3.922 10 F -0.175 7.175 11 C 0.115 3.885 12 N -0.727 5.727 13 C 0.492 3.508 14 O -0.513 6.513 15 C 0.092 3.908 16 N -0.466 5.466 17 C 0.068 3.932 18 C -0.197 4.197 19 C -0.029 4.029 20 O -0.542 6.542 21 Si 0.682 3.318 22 C -0.087 4.087 23 C -0.066 4.066 24 C -0.145 4.145 25 C -0.096 4.096 26 C -0.128 4.128 27 C 0.109 3.891 28 C -0.136 4.136 29 H 0.082 0.918 30 H 0.068 0.932 31 H 0.067 0.933 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.103 0.897 35 H 0.120 0.880 36 H 0.084 0.916 37 H 0.093 0.907 38 H 0.406 0.594 39 H 0.119 0.881 40 H 0.125 0.875 41 H 0.171 0.829 42 H 0.111 0.889 43 H 0.376 0.624 44 H -0.256 1.256 45 H -0.255 1.255 46 H 0.122 0.878 47 H 0.123 0.877 48 H 0.125 0.875 49 H 0.115 0.885 50 H 0.120 0.880 51 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.485 -1.293 0.706 8.612 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.012 4.012 3 O -0.273 6.273 4 C 0.316 3.684 5 O -0.375 6.375 6 C -0.132 4.132 7 H 0.145 0.855 8 C -0.171 4.171 9 C 0.059 3.941 10 F -0.155 7.155 11 C -0.009 4.009 12 N -0.381 5.381 13 C 0.276 3.724 14 O -0.386 6.386 15 C -0.034 4.034 16 N -0.150 5.150 17 C -0.056 4.056 18 C -0.205 4.205 19 C -0.140 4.140 20 O -0.347 6.347 21 Si 0.584 3.416 22 C -0.091 4.091 23 C -0.084 4.084 24 C -0.164 4.164 25 C -0.116 4.116 26 C -0.149 4.149 27 C 0.004 3.996 28 C -0.173 4.173 29 H 0.101 0.899 30 H 0.087 0.913 31 H 0.086 0.914 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.121 0.879 35 H 0.138 0.862 36 H 0.102 0.898 37 H 0.111 0.889 38 H 0.240 0.760 39 H 0.137 0.863 40 H 0.143 0.857 41 H 0.188 0.812 42 H 0.128 0.872 43 H 0.223 0.777 44 H -0.181 1.181 45 H -0.179 1.179 46 H 0.140 0.860 47 H 0.141 0.859 48 H 0.143 0.857 49 H 0.133 0.867 50 H 0.139 0.861 51 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -7.559 -0.301 1.703 7.754 hybrid contribution 0.153 -0.991 0.202 1.023 sum -7.406 -1.292 1.905 7.755 Atomic orbital electron populations 1.21825 0.92235 1.03340 1.03660 1.23100 0.95602 0.79603 1.02851 1.86474 1.23995 1.32951 1.83885 1.22881 0.80938 0.91629 0.72964 1.90720 1.60378 1.42546 1.43872 1.21993 0.97587 0.92085 1.01578 0.85549 1.23555 0.93641 1.06261 0.93601 1.22171 0.96970 0.79989 0.95002 1.92942 1.97235 1.38401 1.86903 1.21803 0.99517 0.99916 0.79705 1.45783 1.38545 1.47342 1.06432 1.21048 0.81559 0.80374 0.89403 1.90828 1.33324 1.37885 1.76584 1.21571 0.94491 0.97485 0.89820 1.43206 1.08873 1.12094 1.50800 1.21499 0.99437 0.84407 1.00268 1.20637 0.93298 0.97052 1.09512 1.24335 1.09244 0.96445 0.83994 1.86504 1.44602 1.85686 1.17905 0.95415 0.84808 0.80432 0.80945 1.18941 0.94136 0.93151 1.02850 1.20304 0.91927 0.98062 0.98149 1.20674 1.00204 0.93518 1.02040 1.20827 0.93814 0.98716 0.98198 1.19970 0.94471 0.95657 1.04761 1.18164 0.84035 0.96290 1.01067 1.23627 0.96012 1.02516 0.95196 0.89919 0.91333 0.91371 0.91032 0.91035 0.87886 0.86213 0.89794 0.88917 0.75961 0.86285 0.85685 0.81192 0.87184 0.77715 1.18065 1.17922 0.85977 0.85930 0.85715 0.86720 0.86130 0.89018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.35 10.29 37.16 0.38 0.74 16 2 C 0.06 -0.02 6.19 37.16 0.23 0.21 16 3 O -0.36 -0.28 10.22 -39.24 -0.40 -0.69 16 4 C 0.47 0.52 6.93 36.01 0.25 0.77 16 5 O -0.49 -2.06 14.47 -18.75 -0.27 -2.33 16 6 C -0.11 0.28 4.46 -90.96 -0.41 -0.13 16 7 H 0.13 -0.57 8.14 -51.93 -0.42 -0.99 16 8 C -0.13 0.35 6.93 -25.92 -0.18 0.17 16 9 C 0.08 -0.17 1.66 -89.84 -0.15 -0.32 16 10 F -0.17 -0.20 15.11 2.25 0.03 -0.17 16 11 C 0.11 -0.24 5.36 -4.04 -0.02 -0.26 16 12 N -0.73 1.80 5.47 -60.29 -0.33 1.47 16 13 C 0.49 -0.05 7.90 -10.99 -0.09 -0.14 16 14 O -0.51 -2.54 16.42 5.55 0.09 -2.45 16 15 C 0.09 -0.24 6.48 -5.20 -0.03 -0.28 16 16 N -0.47 -0.50 2.27 -115.71 -0.26 -0.77 16 17 C 0.07 0.03 9.89 -16.73 -0.17 -0.13 16 18 C -0.20 -0.46 5.58 -102.71 -0.57 -1.04 16 19 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 20 O -0.54 -0.85 12.88 -35.23 -0.45 -1.30 16 21 Si 0.68 -0.26 30.75 -169.99 -5.23 -5.49 16 22 C -0.09 -0.38 6.35 -105.14 -0.67 -1.04 16 23 C -0.07 -0.26 10.05 -39.65 -0.40 -0.66 16 24 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 25 C -0.10 -0.25 10.01 -39.54 -0.40 -0.64 16 26 C -0.13 -0.37 10.00 -39.43 -0.39 -0.77 16 27 C 0.11 0.39 6.80 -83.99 -0.57 -0.18 16 28 C -0.14 0.54 7.11 -25.95 -0.18 0.36 16 29 H 0.08 -0.28 8.14 -51.93 -0.42 -0.71 16 30 H 0.07 -0.15 8.14 -51.93 -0.42 -0.58 16 31 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 32 H 0.07 -0.01 8.13 -51.93 -0.42 -0.43 16 33 H 0.07 -0.01 8.13 -51.93 -0.42 -0.44 16 34 H 0.10 -0.06 7.43 -51.93 -0.39 -0.44 16 35 H 0.12 -0.61 8.10 -51.93 -0.42 -1.03 16 36 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 37 H 0.09 -0.26 7.94 -51.93 -0.41 -0.67 16 38 H 0.41 -1.87 8.19 -40.82 -0.33 -2.20 16 39 H 0.12 -0.52 8.14 -51.93 -0.42 -0.94 16 40 H 0.13 -0.79 8.12 -51.93 -0.42 -1.21 16 41 H 0.17 -0.56 6.35 -52.49 -0.33 -0.89 16 42 H 0.11 0.27 7.96 -51.93 -0.41 -0.14 16 43 H 0.38 -0.97 8.70 45.56 0.40 -0.57 16 44 H -0.26 -0.66 7.11 56.52 0.40 -0.25 16 45 H -0.25 -0.71 7.11 56.52 0.40 -0.31 16 46 H 0.12 0.37 8.06 -52.48 -0.42 -0.05 16 47 H 0.12 0.12 8.06 -52.48 -0.42 -0.30 16 48 H 0.12 0.06 8.06 -52.49 -0.42 -0.37 16 49 H 0.11 0.13 8.06 -52.48 -0.42 -0.29 16 50 H 0.12 -0.73 7.96 -51.93 -0.41 -1.15 16 51 H 0.09 -0.34 8.09 -51.93 -0.42 -0.76 16 LS Contribution 432.99 15.07 6.53 6.53 Total: 0.00 -13.70 432.99 -11.38 -25.07 By element: Atomic # 1 Polarization: -8.36 SS G_CDS: -7.43 Total: -15.79 kcal Atomic # 6 Polarization: -0.45 SS G_CDS: -3.65 Total: -4.10 kcal Atomic # 7 Polarization: 1.29 SS G_CDS: -0.59 Total: 0.70 kcal Atomic # 8 Polarization: -5.73 SS G_CDS: -1.04 Total: -6.76 kcal Atomic # 9 Polarization: -0.20 SS G_CDS: 0.03 Total: -0.17 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.23 Total: -5.49 kcal Total LS contribution 6.53 Total: 6.53 kcal Total: -13.70 -11.38 -25.07 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.946 kcal (2) G-P(sol) polarization free energy of solvation -13.698 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.644 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.377 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.075 kcal (6) G-S(sol) free energy of system = (1) + (5) -98.021 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds