Wall clock time and date at job start Tue Mar 9 2021 13:04:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 O 1.45198 * 109.47483 * 2 1 4 4 C 1.34224 * 117.00226 * 179.97438 * 3 2 1 5 5 O 1.20824 * 120.00201 * 0.02562 * 4 3 2 6 6 C 1.50707 * 119.99832 * 179.97438 * 4 3 2 7 7 H 1.09005 * 112.90402 * 48.75296 * 6 4 3 8 8 C 1.53781 * 113.61202 * 180.02562 * 6 4 3 9 9 C 1.53777 * 87.08092 * 89.11818 * 8 6 4 10 10 F 1.39900 * 113.61551 * 270.79594 * 9 8 6 11 11 C 1.53002 * 113.61525 * 139.97791 * 9 8 6 12 12 N 1.46506 * 109.47035 * 179.97438 * 11 9 8 13 13 C 1.34777 * 119.99873 * 179.97438 * 12 11 9 14 14 O 1.21284 * 119.99754 * 0.02562 * 13 12 11 15 15 C 1.50696 * 120.00137 * 180.02562 * 13 12 11 16 16 N 1.46500 * 109.47324 * 180.02562 * 15 13 12 17 17 C 1.36834 * 125.06298 * 265.02611 * 16 15 13 18 18 C 1.34232 * 109.93687 * 179.97438 * 17 16 15 19 19 C 1.50708 * 126.49897 * 180.02562 * 18 17 16 20 20 O 1.42901 * 109.46849 * 254.97370 * 19 18 17 21 21 Si 1.86299 * 109.47079 * 14.97592 * 19 18 17 22 22 C 1.46495 * 107.00350 * 359.97438 * 18 17 16 23 23 C 1.39580 * 134.04074 * 180.02562 * 22 18 17 24 24 C 1.36664 * 119.76372 * 179.97438 * 23 22 18 25 25 C 1.38789 * 120.53295 * 0.02562 * 24 23 22 26 26 C 1.37784 * 120.65896 * 0.02562 * 25 24 23 27 27 C 1.37691 * 125.06222 * 84.71689 * 16 15 13 28 28 C 1.53776 * 113.61518 * 277.49879 * 6 4 3 29 29 H 1.09002 * 109.47002 * 179.97438 * 1 2 3 30 30 H 1.08997 * 109.46786 * 300.00129 * 1 2 3 31 31 H 1.08999 * 109.47049 * 59.99681 * 1 2 3 32 32 H 1.09003 * 109.47452 * 239.99854 * 2 1 3 33 33 H 1.08999 * 109.47049 * 120.00318 * 2 1 3 34 34 H 1.08999 * 113.61454 * 334.57083 * 8 6 4 35 35 H 1.09001 * 113.69285 * 203.67575 * 8 6 4 36 36 H 1.09004 * 109.46930 * 60.00138 * 11 9 8 37 37 H 1.09000 * 109.47312 * 300.00082 * 11 9 8 38 38 H 0.96999 * 120.00080 * 0.02562 * 12 11 9 39 39 H 1.09000 * 109.46978 * 300.00347 * 15 13 12 40 40 H 1.08996 * 109.47197 * 59.99985 * 15 13 12 41 41 H 1.08001 * 125.03157 * 359.96267 * 17 16 15 42 42 H 1.08996 * 109.47030 * 134.97853 * 19 18 17 43 43 H 0.96706 * 114.00001 * 60.00015 * 20 19 18 44 44 H 1.48497 * 110.00050 * 58.67989 * 21 19 18 45 45 H 1.48497 * 109.99986 * 180.02562 * 21 19 18 46 46 H 1.08004 * 120.11870 * 359.95290 * 23 22 18 47 47 H 1.08006 * 119.73714 * 180.02562 * 24 23 22 48 48 H 1.07991 * 119.66856 * 179.97438 * 25 24 23 49 49 H 1.08004 * 120.10895 * 180.02562 * 26 25 24 50 50 H 1.09002 * 113.61231 * 156.33891 * 28 6 4 51 51 H 1.08997 * 113.61864 * 25.43422 * 28 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0141 1.3689 0.0000 4 6 3.3448 1.5447 0.0005 5 8 4.0808 0.5866 0.0005 6 6 3.9208 2.9374 0.0000 7 1 3.4708 3.5829 0.7544 8 6 5.4583 2.9680 0.0001 9 6 5.3806 2.9422 -1.5355 10 9 5.3600 1.6511 -2.0740 11 6 6.4036 3.8536 -2.2164 12 7 6.2506 3.7590 -3.6704 13 6 7.0507 4.4800 -4.4805 14 8 7.8978 5.2067 -4.0059 15 6 6.8929 4.3831 -5.9761 16 7 7.8726 5.2557 -6.6281 17 6 7.6311 6.5374 -7.0419 18 6 8.7377 7.0550 -7.5981 19 6 8.8871 8.4386 -8.1767 20 8 8.8908 8.3602 -9.6035 21 14 7.4642 9.5028 -7.6168 22 6 9.7730 6.0205 -7.5348 23 6 11.1070 5.9567 -7.9405 24 6 11.8254 4.8129 -7.7326 25 6 11.2391 3.7133 -7.1215 26 6 9.9235 3.7544 -6.7141 27 6 9.1753 4.9104 -6.9102 28 6 3.9870 3.5761 -1.3973 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8900 31 1 -0.3633 0.5139 -0.8899 32 1 1.8934 -0.5139 -0.8900 33 1 1.8933 -0.5139 0.8899 34 1 5.9128 2.0751 0.4293 35 1 5.8780 3.8908 0.4005 36 1 7.4102 3.5428 -1.9364 37 1 6.2401 4.8837 -1.8998 38 1 5.5729 3.1780 -4.0499 39 1 7.0568 3.3531 -6.2928 40 1 5.8863 4.6934 -6.2561 41 1 6.6894 7.0557 -6.9368 42 1 9.8248 8.8762 -7.8344 43 1 8.0849 7.9795 -9.9787 44 1 7.4302 9.5662 -6.1336 45 1 7.5995 10.8697 -8.1812 46 1 11.5697 6.8082 -8.4174 47 1 12.8577 4.7642 -8.0463 48 1 11.8196 2.8164 -6.9644 49 1 9.4763 2.8937 -6.2391 50 1 4.0029 4.6658 -1.3789 51 1 3.2536 3.1742 -2.0963 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16501616_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:46 Heat of formation + Delta-G solvation = -99.578915 kcal Electronic energy + Delta-G solvation = -36189.950440 eV Core-core repulsion = 31165.442014 eV Total energy + Delta-G solvation = -5024.508427 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.167 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -48.89775 -42.53564 -41.82712 -40.68390 -39.18620 -38.10929 -37.64123 -37.48812 -35.71929 -34.08356 -32.70667 -31.64893 -30.31619 -30.20093 -28.57989 -27.11255 -26.31809 -25.43074 -23.88742 -23.64537 -22.72304 -22.36543 -21.72779 -20.69020 -20.54288 -19.07437 -18.61237 -18.45950 -17.81583 -17.76032 -17.49383 -17.35415 -17.01287 -16.92099 -16.55774 -16.42898 -16.20258 -16.00651 -15.76597 -15.38575 -15.16794 -15.09503 -14.86296 -14.72985 -14.66095 -14.45113 -14.37560 -14.05438 -13.96211 -13.71922 -13.60666 -13.38507 -13.11431 -13.07747 -12.93155 -12.72057 -12.65248 -12.59771 -12.49552 -12.25165 -12.12133 -11.82356 -11.66841 -11.58604 -11.52138 -11.43812 -11.16112 -10.56797 -10.30611 -10.29585 -9.16910 -8.63490 -5.03214 0.13104 0.61532 1.05506 1.35088 1.39468 1.43182 1.55721 1.64701 1.76058 2.01999 2.12022 2.91810 2.93639 3.05202 3.17949 3.30818 3.49385 3.58040 3.66255 3.68568 3.74974 3.80256 3.88325 3.94492 4.02313 4.03613 4.16083 4.19942 4.27659 4.28812 4.29717 4.35899 4.48412 4.55464 4.56360 4.57869 4.66714 4.70937 4.71845 4.77600 4.82234 4.84984 4.87360 4.87804 5.09094 5.12052 5.13035 5.22238 5.42187 5.48991 5.64406 5.71784 5.74582 6.17398 6.20668 6.38891 6.64938 6.90111 7.03915 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.055 3.945 3 O -0.358 6.358 4 C 0.469 3.531 5 O -0.530 6.530 6 C -0.115 4.115 7 H 0.153 0.847 8 C -0.133 4.133 9 C 0.070 3.930 10 F -0.198 7.198 11 C 0.118 3.882 12 N -0.713 5.713 13 C 0.494 3.506 14 O -0.570 6.570 15 C 0.088 3.912 16 N -0.466 5.466 17 C 0.082 3.918 18 C -0.225 4.225 19 C -0.043 4.043 20 O -0.561 6.561 21 Si 0.804 3.196 22 C -0.116 4.116 23 C -0.090 4.090 24 C -0.154 4.154 25 C -0.109 4.109 26 C -0.135 4.135 27 C 0.090 3.910 28 C -0.118 4.118 29 H 0.095 0.905 30 H 0.069 0.931 31 H 0.071 0.929 32 H 0.065 0.935 33 H 0.065 0.935 34 H 0.076 0.924 35 H 0.148 0.852 36 H 0.062 0.938 37 H 0.106 0.894 38 H 0.418 0.582 39 H 0.139 0.861 40 H 0.173 0.827 41 H 0.212 0.788 42 H 0.087 0.913 43 H 0.393 0.607 44 H -0.291 1.291 45 H -0.299 1.299 46 H 0.117 0.883 47 H 0.136 0.864 48 H 0.143 0.857 49 H 0.130 0.870 50 H 0.152 0.848 51 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.237 -0.864 0.748 11.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.204 4.204 2 C -0.018 4.018 3 O -0.275 6.275 4 C 0.313 3.687 5 O -0.418 6.418 6 C -0.134 4.134 7 H 0.171 0.829 8 C -0.171 4.171 9 C 0.052 3.948 10 F -0.178 7.178 11 C -0.007 4.007 12 N -0.367 5.367 13 C 0.280 3.720 14 O -0.448 6.448 15 C -0.037 4.037 16 N -0.149 5.149 17 C -0.043 4.043 18 C -0.233 4.233 19 C -0.152 4.152 20 O -0.369 6.369 21 Si 0.709 3.291 22 C -0.121 4.121 23 C -0.109 4.109 24 C -0.173 4.173 25 C -0.128 4.128 26 C -0.156 4.156 27 C -0.015 4.015 28 C -0.156 4.156 29 H 0.113 0.887 30 H 0.088 0.912 31 H 0.090 0.910 32 H 0.084 0.916 33 H 0.083 0.917 34 H 0.095 0.905 35 H 0.166 0.834 36 H 0.081 0.919 37 H 0.125 0.875 38 H 0.255 0.745 39 H 0.157 0.843 40 H 0.190 0.810 41 H 0.228 0.772 42 H 0.105 0.895 43 H 0.243 0.757 44 H -0.219 1.219 45 H -0.227 1.227 46 H 0.135 0.865 47 H 0.153 0.847 48 H 0.161 0.839 49 H 0.148 0.852 50 H 0.170 0.830 51 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -10.358 0.057 1.726 10.501 hybrid contribution 1.034 -1.175 0.229 1.582 sum -9.325 -1.118 1.955 9.593 Atomic orbital electron populations 1.21823 0.90507 1.04261 1.03857 1.23228 0.96977 0.79327 1.02284 1.86489 1.24032 1.33391 1.83612 1.23690 0.80695 0.92763 0.71577 1.90701 1.61106 1.44182 1.45841 1.22136 0.97398 0.90321 1.03567 0.82889 1.23652 0.93691 1.06439 0.93276 1.22384 0.98380 0.78977 0.95099 1.92895 1.97406 1.40241 1.87269 1.21770 0.98459 1.00510 0.79921 1.45704 1.38104 1.46608 1.06262 1.21459 0.80635 0.79445 0.90500 1.90816 1.35743 1.40546 1.77664 1.21991 0.95785 0.98220 0.87658 1.43454 1.08516 1.12646 1.50252 1.22102 1.00188 0.84078 0.97921 1.20798 0.93757 0.97301 1.11423 1.24624 1.09742 0.96859 0.84002 1.86454 1.46273 1.85977 1.18183 0.94109 0.81997 0.76275 0.76682 1.19375 0.94719 0.94571 1.03389 1.20445 0.92616 0.98493 0.99305 1.20905 1.00864 0.93472 1.02011 1.21110 0.94204 0.99281 0.98229 1.20239 0.94690 0.96116 1.04516 1.18379 0.85466 0.96262 1.01436 1.23668 0.94171 1.03982 0.93736 0.88672 0.91178 0.91027 0.91636 0.91677 0.90545 0.83361 0.91912 0.87548 0.74490 0.84339 0.80984 0.77194 0.89514 0.75691 1.21859 1.22714 0.86492 0.84660 0.83880 0.85241 0.83002 0.88952 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.74 10.29 71.98 0.74 1.48 16 2 C 0.06 0.00 6.19 71.98 0.45 0.45 16 3 O -0.36 -0.60 10.22 -51.36 -0.52 -1.12 16 4 C 0.47 1.20 6.93 71.24 0.49 1.70 16 5 O -0.53 -5.31 14.47 21.97 0.32 -4.99 16 6 C -0.12 0.71 4.46 -11.01 -0.05 0.66 16 7 H 0.15 -1.75 8.14 -2.38 -0.02 -1.77 16 8 C -0.13 0.75 6.93 31.12 0.22 0.97 16 9 C 0.07 -0.35 1.66 -10.29 -0.02 -0.37 16 10 F -0.20 -0.56 15.11 44.97 0.68 0.12 16 11 C 0.12 -0.58 5.36 86.38 0.46 -0.11 16 12 N -0.71 4.50 5.47 -463.04 -2.53 1.97 16 13 C 0.49 -0.70 7.90 87.66 0.69 0.00 16 14 O -0.57 -5.68 16.42 -3.04 -0.05 -5.73 16 15 C 0.09 -0.66 6.48 85.63 0.55 -0.11 16 16 N -0.47 -0.52 2.27 -520.00 -1.18 -1.70 16 17 C 0.08 -0.03 9.89 83.00 0.82 0.79 16 18 C -0.23 -1.20 5.58 -18.62 -0.10 -1.30 16 19 C -0.04 -0.16 3.06 71.24 0.22 0.05 16 20 O -0.56 -2.23 12.88 -148.98 -1.92 -4.15 16 21 Si 0.80 -1.07 30.75 68.60 2.11 1.04 16 22 C -0.12 -1.21 6.35 -20.20 -0.13 -1.34 16 23 C -0.09 -0.95 10.05 22.23 0.22 -0.73 16 24 C -0.15 -1.20 9.97 22.03 0.22 -0.98 16 25 C -0.11 -0.69 10.01 22.29 0.22 -0.46 16 26 C -0.14 -0.88 10.00 22.37 0.22 -0.66 16 27 C 0.09 0.70 6.80 39.03 0.27 0.96 16 28 C -0.12 1.20 7.11 31.10 0.22 1.42 16 29 H 0.09 -0.71 8.14 -2.39 -0.02 -0.73 16 30 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 31 H 0.07 -0.39 8.14 -2.39 -0.02 -0.41 16 32 H 0.07 0.06 8.13 -2.39 -0.02 0.04 16 33 H 0.06 0.06 8.13 -2.39 -0.02 0.04 16 34 H 0.08 0.02 7.43 -2.39 -0.02 0.01 16 35 H 0.15 -1.76 8.10 -2.39 -0.02 -1.78 16 36 H 0.06 -0.02 8.14 -2.38 -0.02 -0.04 16 37 H 0.11 -0.78 7.94 -2.39 -0.02 -0.80 16 38 H 0.42 -4.64 8.19 -92.71 -0.76 -5.40 16 39 H 0.14 -1.55 8.14 -2.39 -0.02 -1.57 16 40 H 0.17 -2.95 8.12 -2.39 -0.02 -2.97 16 41 H 0.21 -2.07 6.35 -2.91 -0.02 -2.09 16 42 H 0.09 0.66 7.96 -2.39 -0.02 0.64 16 43 H 0.39 -2.06 8.70 -74.05 -0.64 -2.71 16 44 H -0.29 -1.34 7.11 99.48 0.71 -0.63 16 45 H -0.30 -1.79 7.11 99.48 0.71 -1.08 16 46 H 0.12 1.14 8.06 -2.91 -0.02 1.11 16 47 H 0.14 0.50 8.06 -2.91 -0.02 0.48 16 48 H 0.14 0.20 8.06 -2.91 -0.02 0.17 16 49 H 0.13 0.29 8.06 -2.91 -0.02 0.27 16 50 H 0.15 -2.44 7.96 -2.39 -0.02 -2.46 16 51 H 0.09 -0.88 8.09 -2.39 -0.02 -0.90 16 Total: 0.00 -37.31 432.99 2.23 -35.08 By element: Atomic # 1 Polarization: -22.54 SS G_CDS: -0.39 Total: -22.93 kcal Atomic # 6 Polarization: -3.31 SS G_CDS: 5.72 Total: 2.41 kcal Atomic # 7 Polarization: 3.99 SS G_CDS: -3.71 Total: 0.28 kcal Atomic # 8 Polarization: -13.82 SS G_CDS: -2.18 Total: -16.00 kcal Atomic # 9 Polarization: -0.56 SS G_CDS: 0.68 Total: 0.12 kcal Atomic # 14 Polarization: -1.07 SS G_CDS: 2.11 Total: 1.04 kcal Total: -37.31 2.23 -35.08 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16501616_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -64.500 kcal (2) G-P(sol) polarization free energy of solvation -37.314 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.235 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.079 kcal (6) G-S(sol) free energy of system = (1) + (5) -99.579 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds