Wall clock time and date at job start Tue Mar 9 2021 13:13:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86302 * 109.46886 * 2 1 4 4 C 1.50698 * 109.47410 * 120.00155 * 2 1 3 5 5 C 1.35454 * 126.06797 * 244.97627 * 4 2 1 6 6 N 1.35535 * 108.87166 * 180.02562 * 5 4 2 7 7 C 1.37648 * 108.64315 * 0.02562 * 6 5 4 8 8 C 1.46678 * 126.23180 * 179.97438 * 7 6 5 9 9 O 1.21700 * 119.99684 * 180.02562 * 8 7 6 10 10 N 1.34772 * 120.00210 * 0.02924 * 8 7 6 11 11 C 1.46506 * 120.00033 * 180.02562 * 10 8 7 12 12 H 1.08992 * 112.90684 * 336.24748 * 11 10 8 13 13 C 1.54049 * 113.61276 * 107.61836 * 11 10 8 14 14 C 1.53781 * 87.08031 * 89.07129 * 13 11 10 15 15 H 1.08999 * 113.61181 * 270.87794 * 14 13 11 16 16 C 1.52995 * 113.69221 * 139.98770 * 14 13 11 17 17 O 1.42898 * 109.47243 * 87.46495 * 16 14 13 18 18 C 1.35898 * 117.00318 * 180.02562 * 17 16 14 19 19 C 1.38733 * 120.05581 * 359.72541 * 18 17 16 20 20 C 1.38139 * 119.94850 * 179.74461 * 19 18 17 21 21 C 1.38276 * 120.05273 * 0.50757 * 20 19 18 22 22 C 1.38261 * 120.10770 * 359.76701 * 21 20 19 23 23 C 1.38144 * 120.05900 * 359.97438 * 22 21 20 24 24 C 1.53781 * 87.08070 * 25.42738 * 14 13 11 25 25 C 1.37868 * 107.53443 * 0.26252 * 7 6 5 26 26 H 0.96708 * 114.00565 * 59.99936 * 1 2 3 27 27 H 1.09003 * 109.47417 * 240.00245 * 2 1 3 28 28 H 1.48493 * 110.00366 * 298.68245 * 3 2 1 29 29 H 1.48501 * 110.00040 * 60.00401 * 3 2 1 30 30 H 1.07997 * 125.56232 * 359.97438 * 5 4 2 31 31 H 0.97001 * 125.67688 * 180.02562 * 6 5 4 32 32 H 0.97002 * 120.00078 * 359.97438 * 10 8 7 33 33 H 1.09005 * 113.62125 * 334.52173 * 13 11 10 34 34 H 1.08996 * 113.68970 * 203.62749 * 13 11 10 35 35 H 1.09000 * 109.47188 * 207.46798 * 16 14 13 36 36 H 1.09001 * 109.47254 * 327.46560 * 16 14 13 37 37 H 1.08002 * 120.02359 * 359.97438 * 19 18 17 38 38 H 1.08000 * 119.97877 * 180.27226 * 20 19 18 39 39 H 1.07998 * 119.94195 * 179.74576 * 21 20 19 40 40 H 1.08008 * 119.96853 * 180.02562 * 22 21 20 41 41 H 1.08004 * 120.02578 * 179.97438 * 23 22 21 42 42 H 1.09002 * 113.61445 * 89.11830 * 24 14 13 43 43 H 1.09002 * 113.61408 * 219.93560 * 24 14 13 44 44 H 1.08007 * 126.45982 * 179.70228 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6338 -0.1500 2.2439 6 7 2.9062 -1.1032 3.1681 7 6 2.3698 -2.2966 2.7406 8 6 2.4389 -3.5804 3.4466 9 8 1.9224 -4.5700 2.9617 10 7 3.0742 -3.6642 4.6322 11 6 3.1437 -4.9467 5.3371 12 1 2.3431 -5.6301 5.0543 13 6 4.5436 -5.5891 5.3128 14 6 4.8404 -4.8032 6.6009 15 1 5.2517 -3.8099 6.4213 16 6 5.6382 -5.5984 7.6362 17 8 7.0358 -5.4428 7.3826 18 6 7.8903 -6.0902 8.2179 19 6 7.3939 -6.8548 9.2636 20 6 8.2643 -7.5162 10.1081 21 6 9.6297 -7.4081 9.9181 22 6 10.1271 -6.6421 8.8801 23 6 9.2606 -5.9831 8.0297 24 6 3.3241 -4.8048 6.8577 25 6 1.7615 -2.0668 1.5249 26 1 -0.3934 0.4417 -0.7651 27 1 1.7923 -0.5138 -0.8900 28 1 1.5877 2.4586 -1.2241 29 1 1.5614 2.4679 1.2085 30 1 2.9294 0.8870 2.3050 31 1 3.3973 -0.9670 3.9935 32 1 3.4861 -2.8755 5.0186 33 1 5.1515 -5.2796 4.4626 34 1 4.5320 -6.6699 5.4537 35 1 5.4068 -5.2290 8.6352 36 1 5.3718 -6.6532 7.5683 37 1 6.3276 -6.9359 9.4150 38 1 7.8783 -8.1152 10.9196 39 1 10.3087 -7.9227 10.5819 40 1 11.1940 -6.5596 8.7336 41 1 9.6497 -5.3845 7.2193 42 1 2.9777 -5.6712 7.4212 43 1 2.9478 -3.8626 7.2561 44 1 1.2483 -2.7964 0.9159 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534226_10543058.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:13:43 Heat of formation + Delta-G solvation = -0.239027 kcal Electronic energy + Delta-G solvation = -26301.780842 eV Core-core repulsion = 22380.791522 eV Total energy + Delta-G solvation = -3920.989320 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.146 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -42.47768 -41.41659 -40.71102 -39.23001 -38.08512 -37.71945 -34.64959 -32.65906 -32.01741 -31.16333 -30.65146 -29.14069 -26.90761 -26.55738 -24.95345 -23.91849 -23.29270 -22.58742 -21.27361 -20.75256 -20.42481 -19.69568 -19.16566 -18.40606 -17.53915 -17.11228 -16.98399 -16.87593 -16.70575 -16.26005 -15.93052 -15.58034 -15.29467 -15.13155 -15.05038 -14.81188 -14.61624 -14.38232 -14.33696 -14.04772 -13.92800 -13.68961 -13.52854 -13.30956 -13.17666 -12.54869 -12.53355 -12.24096 -12.12500 -11.92199 -11.80336 -11.70230 -11.33512 -11.13588 -10.39109 -10.21844 -9.95615 -9.91060 -9.27863 -9.15793 -4.96892 0.38832 0.42738 0.50561 1.30345 1.54004 1.59932 1.90075 1.98814 2.00965 2.11276 2.37125 2.85158 3.24968 3.33412 3.48707 3.62392 3.64855 3.79001 3.86604 3.91494 3.95526 4.08058 4.09197 4.18781 4.23155 4.25717 4.28484 4.45669 4.49609 4.52503 4.54597 4.60554 4.69117 4.71471 4.86012 4.91133 4.92689 4.98610 5.05362 5.09253 5.34445 5.42164 5.46907 5.60843 5.62988 5.81601 5.81908 6.21662 6.40592 6.44545 6.56223 7.11916 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.041 4.041 3 Si 0.680 3.320 4 C -0.165 4.165 5 C 0.040 3.960 6 N -0.535 5.535 7 C -0.060 4.060 8 C 0.595 3.405 9 O -0.522 6.522 10 N -0.716 5.716 11 C 0.122 3.878 12 H 0.111 0.889 13 C -0.144 4.144 14 C -0.110 4.110 15 H 0.100 0.900 16 C 0.069 3.931 17 O -0.314 6.314 18 C 0.129 3.871 19 C -0.211 4.211 20 C -0.080 4.080 21 C -0.159 4.159 22 C -0.080 4.080 23 C -0.154 4.154 24 C -0.136 4.136 25 C -0.073 4.073 26 H 0.377 0.623 27 H 0.074 0.926 28 H -0.262 1.262 29 H -0.255 1.255 30 H 0.176 0.824 31 H 0.418 0.582 32 H 0.395 0.605 33 H 0.077 0.923 34 H 0.095 0.905 35 H 0.064 0.936 36 H 0.066 0.934 37 H 0.126 0.874 38 H 0.125 0.875 39 H 0.124 0.876 40 H 0.130 0.870 41 H 0.130 0.870 42 H 0.101 0.899 43 H 0.079 0.921 44 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.764 2.833 2.631 5.396 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.151 4.151 3 Si 0.581 3.419 4 C -0.172 4.172 5 C -0.097 4.097 6 N -0.131 5.131 7 C -0.172 4.172 8 C 0.383 3.617 9 O -0.397 6.397 10 N -0.367 5.367 11 C 0.017 3.983 12 H 0.129 0.871 13 C -0.183 4.183 14 C -0.129 4.129 15 H 0.118 0.882 16 C -0.006 4.006 17 O -0.227 6.227 18 C 0.084 3.916 19 C -0.229 4.229 20 C -0.098 4.098 21 C -0.177 4.177 22 C -0.098 4.098 23 C -0.172 4.172 24 C -0.174 4.174 25 C -0.099 4.099 26 H 0.225 0.775 27 H 0.092 0.908 28 H -0.187 1.187 29 H -0.180 1.180 30 H 0.193 0.807 31 H 0.256 0.744 32 H 0.229 0.771 33 H 0.095 0.905 34 H 0.113 0.887 35 H 0.082 0.918 36 H 0.084 0.916 37 H 0.144 0.856 38 H 0.143 0.857 39 H 0.142 0.858 40 H 0.148 0.852 41 H 0.148 0.852 42 H 0.120 0.880 43 H 0.098 0.902 44 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.364 2.717 2.819 5.162 hybrid contribution -0.762 0.270 0.293 0.860 sum 2.602 2.987 3.113 5.038 Atomic orbital electron populations 1.86619 1.18239 1.79924 1.49530 1.24055 0.83866 1.09966 0.97238 0.95435 0.91295 0.74666 0.80485 1.18695 1.06471 0.94230 0.97782 1.21808 1.03128 0.94548 0.90228 1.41872 1.43984 1.07823 1.19469 1.20329 1.11308 0.86011 0.99569 1.17021 0.77846 0.86716 0.80143 1.90880 1.46286 1.36208 1.66290 1.45523 1.57797 1.11650 1.21711 1.21855 0.99049 0.85747 0.91698 0.87133 1.23565 0.96521 1.00445 0.97724 1.22640 0.94327 1.00358 0.95561 0.88174 1.22848 0.78477 1.00259 0.99043 1.86069 1.16746 1.67753 1.52158 1.19026 0.90224 0.92522 0.89861 1.21272 1.00518 1.02990 0.98151 1.20999 0.93313 0.97440 0.98088 1.21126 0.95472 1.01579 0.99560 1.21028 0.99656 0.95259 0.93888 1.20484 0.90055 1.04169 1.02514 1.23345 0.94246 1.03969 0.95835 1.21212 0.98949 0.95714 0.94025 0.77524 0.90846 1.18686 1.18006 0.80674 0.74393 0.77136 0.90471 0.88667 0.91762 0.91583 0.85566 0.85717 0.85773 0.85238 0.85210 0.88040 0.90204 0.83216 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.04 12.86 -35.23 -0.45 -1.49 16 2 C -0.04 -0.01 3.01 36.00 0.11 0.10 16 3 Si 0.68 -1.01 30.60 -169.99 -5.20 -6.21 16 4 C -0.17 -0.22 5.46 -105.02 -0.57 -0.79 16 5 C 0.04 -0.04 10.45 -16.91 -0.18 -0.22 16 6 N -0.54 0.96 5.99 -9.39 -0.06 0.90 16 7 C -0.06 -0.10 7.06 -81.98 -0.58 -0.68 16 8 C 0.59 1.54 7.79 -12.86 -0.10 1.44 16 9 O -0.52 -3.48 16.48 5.19 0.09 -3.39 16 10 N -0.72 0.70 5.26 -54.18 -0.29 0.41 16 11 C 0.12 -0.12 4.34 -66.97 -0.29 -0.41 16 12 H 0.11 0.08 7.46 -51.93 -0.39 -0.31 16 13 C -0.14 0.17 7.44 -25.78 -0.19 -0.02 16 14 C -0.11 0.26 3.88 -89.81 -0.35 -0.09 16 15 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 16 C 0.07 -0.09 4.58 37.16 0.17 0.08 16 17 O -0.31 -0.50 10.14 -19.42 -0.20 -0.69 16 18 C 0.13 0.26 6.69 -39.22 -0.26 -0.01 16 19 C -0.21 -0.21 9.04 -39.43 -0.36 -0.56 16 20 C -0.08 -0.05 10.04 -39.60 -0.40 -0.45 16 21 C -0.16 -0.09 10.04 -39.56 -0.40 -0.49 16 22 C -0.08 -0.06 10.04 -39.61 -0.40 -0.45 16 23 C -0.15 -0.25 9.99 -39.43 -0.39 -0.64 16 24 C -0.14 0.44 7.38 -25.92 -0.19 0.25 16 25 C -0.07 -0.22 10.59 -39.12 -0.41 -0.63 16 26 H 0.38 -0.81 8.74 45.56 0.40 -0.41 16 27 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 28 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 29 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 30 H 0.18 -0.71 6.21 -52.49 -0.33 -1.03 16 31 H 0.42 -2.24 8.19 -40.82 -0.33 -2.57 16 32 H 0.39 -1.53 7.83 -40.82 -0.32 -1.85 16 33 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.09 -0.13 7.90 -51.93 -0.41 -0.55 16 35 H 0.06 -0.13 7.65 -51.93 -0.40 -0.53 16 36 H 0.07 -0.12 7.38 -51.93 -0.38 -0.51 16 37 H 0.13 -0.11 6.30 -52.49 -0.33 -0.44 16 38 H 0.12 -0.16 8.06 -52.49 -0.42 -0.59 16 39 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 40 H 0.13 -0.18 8.06 -52.48 -0.42 -0.60 16 41 H 0.13 0.08 8.06 -52.48 -0.42 -0.35 16 42 H 0.10 -0.40 8.10 -51.93 -0.42 -0.82 16 43 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 44 H 0.15 0.56 8.06 -52.48 -0.42 0.13 16 LS Contribution 371.80 15.07 5.60 5.60 Total: 0.00 -10.30 371.80 -11.20 -21.50 By element: Atomic # 1 Polarization: -7.14 SS G_CDS: -5.90 Total: -13.04 kcal Atomic # 6 Polarization: 1.20 SS G_CDS: -4.79 Total: -3.59 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: -0.34 Total: 1.31 kcal Atomic # 8 Polarization: -5.01 SS G_CDS: -0.56 Total: -5.58 kcal Atomic # 14 Polarization: -1.01 SS G_CDS: -5.20 Total: -6.21 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -10.30 -11.20 -21.50 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534226_10543058.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.263 kcal (2) G-P(sol) polarization free energy of solvation -10.301 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.962 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.201 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.239 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds