Wall clock time and date at job start Tue Mar 9 2021 13:25:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81397 * 1 3 3 C 1.81404 * 103.00143 * 2 1 4 4 C 1.53000 * 109.46946 * 180.02562 * 3 2 1 5 5 H 1.08992 * 112.85173 * 43.80276 * 4 3 2 6 6 C 1.53787 * 113.61228 * 175.00260 * 4 3 2 7 7 C 1.53776 * 87.07971 * 139.97805 * 6 4 3 8 8 H 1.09006 * 113.61662 * 89.20162 * 7 6 4 9 9 N 1.46507 * 113.61558 * 220.01556 * 7 6 4 10 10 C 1.34766 * 120.00093 * 205.00202 * 9 7 6 11 11 O 1.21284 * 120.00448 * 359.97438 * 10 9 7 12 12 C 1.50703 * 120.00069 * 180.02562 * 10 9 7 13 13 N 1.46496 * 109.47642 * 180.02562 * 12 10 9 14 14 C 1.36841 * 125.06111 * 265.02443 * 13 12 10 15 15 C 1.34233 * 109.93932 * 179.97438 * 14 13 12 16 16 C 1.50696 * 126.50379 * 179.97438 * 15 14 13 17 17 O 1.42896 * 109.47431 * 105.02191 * 16 15 14 18 18 Si 1.86307 * 109.46681 * 345.02576 * 16 15 14 19 19 C 1.46495 * 106.99919 * 0.02562 * 15 14 13 20 20 C 1.39589 * 134.04001 * 180.02562 * 19 15 14 21 21 C 1.36661 * 119.76487 * 179.97438 * 20 19 15 22 22 C 1.38788 * 120.53106 * 0.02562 * 21 20 19 23 23 C 1.37787 * 120.66325 * 0.02562 * 22 21 20 24 24 C 1.37688 * 125.06644 * 84.71502 * 13 12 10 25 25 C 1.53781 * 87.08649 * 334.56685 * 7 6 4 26 26 H 1.09007 * 109.46846 * 299.99983 * 1 2 3 27 27 H 1.09007 * 109.47453 * 59.99610 * 1 2 3 28 28 H 1.08996 * 109.47605 * 179.97438 * 1 2 3 29 29 H 1.09002 * 109.47124 * 60.00087 * 3 2 1 30 30 H 1.09001 * 109.46975 * 300.00209 * 3 2 1 31 31 H 1.08999 * 113.61008 * 254.52793 * 6 4 3 32 32 H 1.09001 * 113.61614 * 25.34468 * 6 4 3 33 33 H 0.97002 * 119.99477 * 25.00218 * 9 7 6 34 34 H 1.09008 * 109.46866 * 300.00123 * 12 10 9 35 35 H 1.09005 * 109.47027 * 59.99367 * 12 10 9 36 36 H 1.08000 * 125.02799 * 359.95993 * 14 13 12 37 37 H 1.09000 * 109.47055 * 225.02878 * 16 15 14 38 38 H 0.96701 * 114.00500 * 180.02562 * 17 16 15 39 39 H 1.48492 * 109.99962 * 298.67806 * 18 16 15 40 40 H 1.48502 * 109.99896 * 60.00081 * 18 16 15 41 41 H 1.08003 * 120.11886 * 359.97438 * 20 19 15 42 42 H 1.08000 * 119.73472 * 180.02562 * 21 20 19 43 43 H 1.08003 * 119.66947 * 179.97438 * 22 21 20 44 44 H 1.08004 * 120.11415 * 180.02562 * 23 22 21 45 45 H 1.08998 * 113.61029 * 270.89062 * 25 7 6 46 46 H 1.08997 * 113.61702 * 139.98220 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2221 1.7675 0.0000 4 6 3.7423 1.9399 -0.0006 5 1 4.2443 1.2674 -0.6961 6 6 4.1962 3.4041 -0.1234 7 6 5.2875 3.0700 0.9072 8 1 6.2135 2.7075 0.4608 9 7 5.5085 4.1311 1.8929 10 6 6.6996 4.2360 2.5145 11 8 7.5886 3.4517 2.2583 12 6 6.9268 5.3272 3.5288 13 7 8.2900 5.2280 4.0560 14 6 8.6427 4.5746 5.2054 15 6 9.9671 4.6740 5.4005 16 6 10.7500 4.0930 6.5496 17 8 11.4739 2.9456 6.1009 18 14 9.5787 3.5952 7.9102 19 6 10.5068 5.4555 4.2851 20 6 11.7866 5.8868 3.9322 21 6 11.9650 6.6219 2.7940 22 6 10.8835 6.9437 1.9859 23 6 9.6116 6.5292 2.3160 24 6 9.4081 5.7732 3.4656 25 6 4.3619 1.9481 1.4069 26 1 -0.3633 0.5139 0.8901 27 1 -0.3634 0.5139 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 1.8032 2.2372 0.8900 30 1 1.8031 2.2371 -0.8900 31 1 4.5887 3.6584 -1.1080 32 1 3.4587 4.1215 0.2365 33 1 4.7974 4.7582 2.0980 34 1 6.7912 6.2989 3.0537 35 1 6.2124 5.2191 4.3449 36 1 7.9570 4.0559 5.8589 37 1 11.4492 4.8392 6.9269 38 1 12.0015 2.5190 6.7900 39 1 8.8428 4.7853 8.4074 40 1 8.6201 2.5781 7.4084 41 1 12.6329 5.6405 4.5564 42 1 12.9554 6.9550 2.5211 43 1 11.0403 7.5257 1.0897 44 1 8.7765 6.7843 1.6805 45 1 3.6703 2.2675 2.1864 46 1 4.8882 1.0272 1.6577 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534458_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:39 Heat of formation + Delta-G solvation = 29.496733 kcal Electronic energy + Delta-G solvation = -27499.383288 eV Core-core repulsion = 23676.442608 eV Total energy + Delta-G solvation = -3822.940680 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.134 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -42.48369 -41.20053 -39.55840 -37.93013 -37.47048 -34.97095 -34.09379 -31.53144 -30.73227 -30.17166 -29.82194 -28.82172 -26.91042 -25.78729 -24.10844 -23.46125 -22.43960 -21.70820 -20.82783 -20.41062 -18.53390 -18.27703 -18.17866 -17.72819 -17.50793 -16.78779 -16.55012 -16.37348 -16.32948 -15.67350 -15.46270 -15.40442 -14.93433 -14.82827 -14.72185 -14.64031 -14.45210 -14.32810 -14.02412 -13.98071 -13.66381 -13.55617 -13.51211 -13.47086 -12.95032 -12.62500 -12.44726 -12.35295 -12.28314 -11.89697 -11.73315 -11.63590 -11.60853 -11.05239 -10.97450 -10.41677 -10.19980 -10.08670 -9.02286 -8.70352 -8.53245 -4.96104 0.27095 0.61403 0.79948 1.36954 1.38040 1.39351 1.55502 1.67243 1.76465 2.03452 2.10901 3.10124 3.24171 3.35528 3.44011 3.45856 3.56196 3.63273 3.69788 3.76202 3.81865 3.85893 4.08578 4.10152 4.10625 4.12784 4.16044 4.32193 4.36044 4.37013 4.46163 4.47502 4.58150 4.64156 4.69479 4.70817 4.78445 4.81986 4.90564 4.91503 4.99219 5.08692 5.25494 5.37693 5.64625 5.80233 5.85727 5.89474 6.14841 6.30616 6.37168 6.84577 7.01385 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 S -0.261 6.261 3 C -0.073 4.073 4 C -0.092 4.092 5 H 0.105 0.895 6 C -0.135 4.135 7 C 0.123 3.877 8 H 0.118 0.882 9 N -0.719 5.719 10 C 0.491 3.509 11 O -0.510 6.510 12 C 0.091 3.909 13 N -0.466 5.466 14 C 0.064 3.936 15 C -0.151 4.151 16 C -0.033 4.033 17 O -0.545 6.545 18 Si 0.682 3.318 19 C -0.085 4.085 20 C -0.063 4.063 21 C -0.145 4.145 22 C -0.096 4.096 23 C -0.128 4.128 24 C 0.110 3.890 25 C -0.143 4.143 26 H 0.076 0.924 27 H 0.077 0.923 28 H 0.102 0.898 29 H 0.081 0.919 30 H 0.084 0.916 31 H 0.081 0.919 32 H 0.089 0.911 33 H 0.402 0.598 34 H 0.119 0.881 35 H 0.121 0.879 36 H 0.162 0.838 37 H 0.070 0.930 38 H 0.377 0.623 39 H -0.256 1.256 40 H -0.254 1.254 41 H 0.123 0.877 42 H 0.124 0.876 43 H 0.126 0.874 44 H 0.115 0.885 45 H 0.087 0.913 46 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.580 3.589 2.185 6.215 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.292 4.292 2 S -0.035 6.035 3 C -0.221 4.221 4 C -0.112 4.112 5 H 0.123 0.877 6 C -0.175 4.175 7 C 0.018 3.982 8 H 0.136 0.864 9 N -0.371 5.371 10 C 0.274 3.726 11 O -0.383 6.383 12 C -0.035 4.035 13 N -0.149 5.149 14 C -0.060 4.060 15 C -0.158 4.158 16 C -0.144 4.144 17 O -0.351 6.351 18 Si 0.583 3.417 19 C -0.090 4.090 20 C -0.081 4.081 21 C -0.165 4.165 22 C -0.115 4.115 23 C -0.148 4.148 24 C 0.005 3.995 25 C -0.182 4.182 26 H 0.095 0.905 27 H 0.096 0.904 28 H 0.121 0.879 29 H 0.100 0.900 30 H 0.103 0.897 31 H 0.100 0.900 32 H 0.108 0.892 33 H 0.236 0.764 34 H 0.137 0.863 35 H 0.139 0.861 36 H 0.179 0.821 37 H 0.088 0.912 38 H 0.224 0.776 39 H -0.181 1.181 40 H -0.179 1.179 41 H 0.141 0.859 42 H 0.142 0.858 43 H 0.144 0.856 44 H 0.133 0.867 45 H 0.105 0.895 46 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -4.715 2.268 1.610 5.474 hybrid contribution -1.443 1.528 -0.470 2.154 sum -6.158 3.796 1.140 7.324 Atomic orbital electron populations 1.23401 0.94052 1.06797 1.04910 1.87110 1.07453 1.10928 1.98034 1.23381 0.99007 0.94809 1.04936 1.22104 0.92741 0.97445 0.98910 0.87691 1.23422 0.97683 0.96336 1.00040 1.22533 0.98562 0.87871 0.89203 0.86421 1.45931 1.14636 1.33737 1.42800 1.21029 0.82749 0.86277 0.82507 1.90832 1.42460 1.42191 1.62811 1.21602 0.83649 0.99788 0.98487 1.43162 1.05019 1.46700 1.20033 1.21401 0.96001 0.99056 0.89578 1.19532 0.91976 1.06097 0.98210 1.23934 1.00547 0.89988 0.99915 1.86575 1.65306 1.42936 1.40236 0.95290 0.81538 0.82042 0.82805 1.18930 0.92993 1.01678 0.95362 1.20283 0.94931 0.96316 0.96618 1.20670 0.99015 1.01077 0.95691 1.20828 0.91597 0.99596 0.99466 1.19954 0.97959 1.01431 0.95483 1.18170 0.85579 0.99534 0.96187 1.23545 0.98530 0.99644 0.96450 0.90493 0.90430 0.87902 0.90006 0.89741 0.90026 0.89235 0.76370 0.86297 0.86141 0.82101 0.91243 0.77563 1.18073 1.17881 0.85869 0.85797 0.85628 0.86685 0.89471 0.90390 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.16 10.76 101.05 1.09 1.25 16 2 S -0.26 -0.24 22.37 -107.50 -2.40 -2.65 16 3 C -0.07 0.12 5.78 37.16 0.21 0.33 16 4 C -0.09 0.15 3.66 -89.80 -0.33 -0.18 16 5 H 0.10 -0.06 8.13 -51.93 -0.42 -0.48 16 6 C -0.13 0.39 7.39 -25.92 -0.19 0.20 16 7 C 0.12 -0.11 4.24 -67.12 -0.28 -0.39 16 8 H 0.12 0.19 7.46 -51.93 -0.39 -0.20 16 9 N -0.72 1.29 5.35 -53.01 -0.28 1.01 16 10 C 0.49 0.70 7.90 -10.99 -0.09 0.62 16 11 O -0.51 -3.53 16.02 5.55 0.09 -3.44 16 12 C 0.09 -0.08 6.48 -5.19 -0.03 -0.11 16 13 N -0.47 -1.57 2.27 -115.70 -0.26 -1.83 16 14 C 0.06 0.26 9.89 -16.73 -0.17 0.09 16 15 C -0.15 -0.74 5.61 -102.71 -0.58 -1.31 16 16 C -0.03 -0.06 3.05 36.00 0.11 0.05 16 17 O -0.54 -1.45 12.86 -35.23 -0.45 -1.90 16 18 Si 0.68 -0.10 30.79 -169.99 -5.23 -5.33 16 19 C -0.09 -0.49 6.35 -105.14 -0.67 -1.16 16 20 C -0.06 -0.28 10.05 -39.65 -0.40 -0.67 16 21 C -0.15 -0.46 9.97 -39.95 -0.40 -0.85 16 22 C -0.10 -0.27 10.01 -39.54 -0.40 -0.67 16 23 C -0.13 -0.45 10.00 -39.43 -0.39 -0.84 16 24 C 0.11 0.55 6.80 -83.99 -0.57 -0.02 16 25 C -0.14 0.12 7.43 -25.92 -0.19 -0.07 16 26 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 27 H 0.08 -0.16 8.14 -51.92 -0.42 -0.58 16 28 H 0.10 -0.17 8.14 -51.93 -0.42 -0.59 16 29 H 0.08 -0.19 7.84 -51.92 -0.41 -0.60 16 30 H 0.08 -0.18 8.14 -51.92 -0.42 -0.61 16 31 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 32 H 0.09 -0.39 8.08 -51.93 -0.42 -0.81 16 33 H 0.40 -2.06 8.73 -40.82 -0.36 -2.42 16 34 H 0.12 -0.41 8.14 -51.92 -0.42 -0.84 16 35 H 0.12 -0.48 8.12 -51.93 -0.42 -0.90 16 36 H 0.16 0.34 6.30 -52.49 -0.33 0.01 16 37 H 0.07 0.03 7.96 -51.93 -0.41 -0.38 16 38 H 0.38 -1.08 8.74 45.56 0.40 -0.68 16 39 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 40 H -0.25 -0.71 7.04 56.52 0.40 -0.31 16 41 H 0.12 0.35 8.06 -52.48 -0.42 -0.07 16 42 H 0.12 0.11 8.06 -52.49 -0.42 -0.31 16 43 H 0.13 0.05 8.06 -52.48 -0.42 -0.37 16 44 H 0.12 0.16 8.06 -52.48 -0.42 -0.26 16 45 H 0.09 -0.13 7.90 -51.93 -0.41 -0.54 16 46 H 0.08 0.07 8.14 -51.93 -0.42 -0.35 16 LS Contribution 397.66 15.07 5.99 5.99 Total: 0.00 -11.66 397.66 -12.85 -24.51 By element: Atomic # 1 Polarization: -5.59 SS G_CDS: -7.02 Total: -12.62 kcal Atomic # 6 Polarization: -0.49 SS G_CDS: -3.27 Total: -3.76 kcal Atomic # 7 Polarization: -0.28 SS G_CDS: -0.55 Total: -0.82 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -0.36 Total: -5.34 kcal Atomic # 14 Polarization: -0.10 SS G_CDS: -5.23 Total: -5.33 kcal Atomic # 16 Polarization: -0.24 SS G_CDS: -2.40 Total: -2.65 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -11.66 -12.85 -24.51 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534458_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 54.010 kcal (2) G-P(sol) polarization free energy of solvation -11.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 42.349 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.852 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.513 kcal (6) G-S(sol) free energy of system = (1) + (5) 29.497 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds