Wall clock time and date at job start Tue Mar 9 2021 12:52:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81397 * 1 3 3 O 1.42092 * 108.58110 * 2 1 4 4 O 1.42101 * 108.57714 * 228.97292 * 2 1 3 5 5 C 1.81405 * 101.92330 * 114.49215 * 2 1 3 6 6 C 1.52992 * 109.47195 * 180.02562 * 5 2 1 7 7 H 1.09004 * 112.90752 * 316.24546 * 6 5 2 8 8 C 1.53784 * 113.61673 * 87.49915 * 6 5 2 9 9 C 1.53778 * 87.08081 * 139.98135 * 8 6 5 10 10 H 1.09007 * 113.69188 * 220.01042 * 9 8 6 11 11 N 1.46498 * 113.61736 * 89.11728 * 9 8 6 12 12 C 1.34778 * 120.00186 * 107.49948 * 11 9 8 13 13 O 1.21585 * 119.99804 * 0.02562 * 12 11 9 14 14 C 1.47560 * 119.99904 * 180.02562 * 12 11 9 15 15 C 1.40218 * 120.12031 * 179.97438 * 14 12 11 16 16 O 1.35652 * 119.99883 * 0.02874 * 15 14 12 17 17 C 1.38812 * 119.99721 * 180.02562 * 15 14 12 18 18 C 1.37771 * 120.24429 * 0.02562 * 17 15 14 19 19 C 1.39848 * 120.24537 * 359.97438 * 18 17 15 20 20 C 1.47811 * 120.00111 * 180.02562 * 19 18 17 21 21 C 1.35937 * 125.92957 * 359.97438 * 20 19 18 22 22 C 1.40973 * 106.74082 * 179.97438 * 21 20 19 23 23 C 1.34701 * 107.03058 * 0.02562 * 22 21 20 24 24 C 1.50693 * 125.66459 * 179.97438 * 23 22 21 25 25 O 1.42899 * 109.47190 * 64.99969 * 24 23 22 26 26 Si 1.86302 * 109.47050 * 185.00010 * 24 23 22 27 27 O 1.34347 * 108.66922 * 359.75437 * 23 22 21 28 28 C 1.39173 * 119.99714 * 359.76720 * 19 18 17 29 29 C 1.53778 * 87.08449 * 334.56700 * 9 8 6 30 30 H 1.09006 * 109.47035 * 305.50710 * 1 2 3 31 31 H 1.08999 * 109.47498 * 65.51183 * 1 2 3 32 32 H 1.09003 * 109.47402 * 185.51118 * 1 2 3 33 33 H 1.08996 * 109.47203 * 59.99488 * 5 2 1 34 34 H 1.09007 * 109.46418 * 299.99672 * 5 2 1 35 35 H 1.08993 * 113.61313 * 254.52732 * 8 6 5 36 36 H 1.09000 * 113.61578 * 25.43464 * 8 6 5 37 37 H 0.97004 * 120.00105 * 287.50659 * 11 9 8 38 38 H 0.96700 * 114.00212 * 89.99976 * 16 15 14 39 39 H 1.08003 * 119.88018 * 180.02562 * 17 15 14 40 40 H 1.07999 * 119.87779 * 180.02562 * 18 17 15 41 41 H 1.08000 * 126.62912 * 359.97438 * 21 20 19 42 42 H 1.08001 * 126.48053 * 179.97438 * 22 21 20 43 43 H 1.08998 * 109.47470 * 304.99654 * 24 23 22 44 44 H 0.96701 * 114.00084 * 60.00420 * 25 24 23 45 45 H 1.48504 * 109.99864 * 180.02562 * 26 24 23 46 46 H 1.48496 * 110.00052 * 301.31626 * 26 24 23 47 47 H 1.08004 * 120.12153 * 180.27648 * 28 19 18 48 48 H 1.08998 * 113.61879 * 270.88747 * 29 9 8 49 49 H 1.08999 * 113.61887 * 139.97854 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3469 0.0000 4 8 2.2667 -0.8842 -1.0161 5 6 2.1888 -0.7358 1.6152 6 6 3.7054 -0.8186 1.7984 7 1 4.2216 -1.1752 0.9070 8 6 4.3236 0.4544 2.4004 9 6 5.2283 -0.4719 3.2300 10 1 5.3782 -0.1342 4.2555 11 7 6.4817 -0.8239 2.5581 12 6 7.6454 -0.2912 2.9804 13 8 7.6551 0.4812 3.9193 14 6 8.9077 -0.6453 2.3032 15 6 10.1198 -0.0921 2.7401 16 8 10.1335 0.7698 3.7875 17 6 11.3057 -0.4266 2.1009 18 6 11.2975 -1.3012 1.0364 19 6 10.0944 -1.8589 0.5922 20 6 10.0919 -2.7970 -0.5501 21 6 11.1829 -3.1994 -1.2542 22 6 10.7209 -4.0886 -2.2458 23 6 9.3852 -4.1833 -2.0995 24 6 8.4662 -5.0259 -2.9457 25 8 8.7720 -6.4080 -2.7499 26 14 6.6988 -4.7050 -2.4517 27 8 9.0091 -3.4055 -1.0707 28 6 8.9002 -1.5347 1.2291 29 6 4.1318 -1.5406 3.0875 30 1 -0.3633 0.5969 0.8366 31 1 -0.3634 0.4260 -0.9352 32 1 -0.3634 -1.0229 0.0987 33 1 1.7610 -1.7370 1.6664 34 1 1.7610 -0.1172 2.4042 35 1 4.8669 1.0607 1.6757 36 1 3.6256 1.0363 3.0021 37 1 6.4740 -1.4404 1.8091 38 1 10.2462 0.3422 4.6474 39 1 12.2383 0.0002 2.4392 40 1 12.2237 -1.5577 0.5436 41 1 12.2059 -2.8964 -1.0864 42 1 11.3238 -4.5970 -2.9836 43 1 8.6021 -4.7690 -3.9962 44 1 8.6724 -6.7072 -1.8358 45 1 5.7823 -5.5306 -3.2787 46 1 6.5080 -5.0212 -1.0135 47 1 7.9705 -1.9677 0.8905 48 1 3.3812 -1.5041 3.8770 49 1 4.5201 -2.5448 2.9174 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_13259648.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:08 Heat of formation + Delta-G solvation = -93.552750 kcal Electronic energy + Delta-G solvation = -36539.994037 eV Core-core repulsion = 31529.726152 eV Total energy + Delta-G solvation = -5010.267885 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 408.121 amu Computer time = 3.21 seconds Orbital eigenvalues (eV) -43.71407 -41.74400 -40.64849 -39.00773 -38.21023 -37.98022 -37.81307 -37.01538 -34.84195 -34.18382 -32.80668 -32.52956 -31.10388 -30.35831 -30.04113 -26.90436 -26.42238 -25.68058 -24.28166 -23.49907 -22.92795 -21.96913 -21.23410 -20.49966 -19.94429 -19.60874 -19.17712 -18.41661 -17.85725 -17.69244 -17.48099 -17.26595 -17.13539 -17.08749 -16.67738 -16.47219 -16.31240 -15.96468 -15.82840 -15.67184 -15.45912 -15.18269 -14.67097 -14.52758 -14.37756 -14.31469 -14.29168 -14.17421 -13.98644 -13.79904 -13.68454 -13.55729 -13.28551 -13.14812 -13.13114 -13.06267 -12.97647 -12.89643 -12.57915 -12.28522 -12.05605 -12.01360 -11.84243 -11.49683 -11.19354 -11.07669 -10.81368 -10.80590 -10.47834 -10.33621 -10.08576 -8.92670 -4.98003 -1.09894 -0.58017 -0.24580 0.75851 1.11163 1.44975 1.47681 1.66854 1.68122 1.90397 1.91532 1.97088 2.55243 2.60756 2.88681 3.06927 3.13696 3.19380 3.23975 3.25313 3.42081 3.45183 3.55187 3.63142 3.71820 3.76640 3.85372 3.91301 3.96203 3.96502 4.09965 4.14204 4.25197 4.30327 4.36845 4.53011 4.56304 4.56930 4.57485 4.59173 4.70258 4.75412 4.80341 4.81552 4.95134 4.97002 4.99230 5.08972 5.13787 5.39139 5.42773 5.48197 5.96111 6.22144 6.38860 6.65265 7.17069 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.417 3.583 3 O -0.932 6.932 4 O -0.938 6.938 5 C -0.602 4.602 6 C -0.108 4.108 7 H 0.105 0.895 8 C -0.151 4.151 9 C 0.121 3.879 10 H 0.111 0.889 11 N -0.714 5.714 12 C 0.564 3.436 13 O -0.513 6.513 14 C -0.165 4.165 15 C 0.181 3.819 16 O -0.475 6.475 17 C -0.148 4.148 18 C -0.052 4.052 19 C -0.033 4.033 20 C 0.035 3.965 21 C -0.188 4.188 22 C -0.169 4.169 23 C -0.048 4.048 24 C -0.034 4.034 25 O -0.521 6.521 26 Si 0.696 3.304 27 O -0.166 6.166 28 C -0.054 4.054 29 C -0.131 4.131 30 H 0.128 0.872 31 H 0.130 0.870 32 H 0.128 0.872 33 H 0.136 0.864 34 H 0.136 0.864 35 H 0.084 0.916 36 H 0.101 0.899 37 H 0.400 0.600 38 H 0.399 0.601 39 H 0.146 0.854 40 H 0.140 0.860 41 H 0.154 0.846 42 H 0.154 0.846 43 H 0.138 0.862 44 H 0.380 0.620 45 H -0.247 1.247 46 H -0.255 1.255 47 H 0.135 0.865 48 H 0.103 0.897 49 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.170 -3.081 1.632 4.106 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.599 3.401 3 O -0.929 6.929 4 O -0.935 6.935 5 C -0.731 4.731 6 C -0.127 4.127 7 H 0.123 0.877 8 C -0.190 4.190 9 C 0.015 3.985 10 H 0.129 0.871 11 N -0.366 5.366 12 C 0.352 3.648 13 O -0.388 6.388 14 C -0.168 4.168 15 C 0.134 3.866 16 O -0.287 6.287 17 C -0.167 4.167 18 C -0.070 4.070 19 C -0.033 4.033 20 C -0.015 4.015 21 C -0.207 4.207 22 C -0.188 4.188 23 C -0.098 4.098 24 C -0.143 4.143 25 O -0.327 6.327 26 Si 0.595 3.405 27 O -0.063 6.063 28 C -0.073 4.073 29 C -0.170 4.170 30 H 0.147 0.853 31 H 0.149 0.851 32 H 0.146 0.854 33 H 0.154 0.846 34 H 0.154 0.846 35 H 0.103 0.897 36 H 0.119 0.881 37 H 0.236 0.764 38 H 0.258 0.742 39 H 0.164 0.836 40 H 0.158 0.842 41 H 0.172 0.828 42 H 0.172 0.828 43 H 0.155 0.845 44 H 0.228 0.772 45 H -0.171 1.171 46 H -0.178 1.178 47 H 0.153 0.847 48 H 0.121 0.879 49 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -2.619 -2.073 1.029 3.495 hybrid contribution 0.114 -1.857 0.980 2.103 sum -2.506 -3.930 2.009 5.076 Atomic orbital electron populations 1.30305 1.26918 1.11576 1.12024 1.07987 0.78324 0.76048 0.77785 1.93627 1.78780 1.34164 1.86368 1.93616 1.79022 1.67079 1.53791 1.30316 1.04967 1.14152 1.23628 1.22384 0.90781 0.99632 0.99926 0.87702 1.23651 0.99109 0.95975 1.00233 1.21809 0.82501 0.96110 0.98030 0.87111 1.45614 1.06026 1.48723 1.36274 1.17967 0.83040 0.80474 0.83356 1.90839 1.86631 1.33680 1.27682 1.20249 0.94177 1.02010 1.00385 1.18592 0.90511 0.87435 0.90076 1.84757 1.95149 1.32410 1.16339 1.21398 0.98333 0.99165 0.97770 1.21132 0.97077 0.94079 0.94738 1.17570 0.93986 0.97689 0.94102 1.20263 0.84672 0.99104 0.97473 1.21861 0.99435 1.01485 0.97888 1.21570 0.93883 1.01617 1.01777 1.22846 0.95753 0.99011 0.92218 1.24334 1.07901 0.80824 1.01270 1.86669 1.90265 1.22212 1.33580 0.94377 0.73904 0.91337 0.80860 1.83930 1.35071 1.48272 1.39054 1.21300 0.98004 0.94750 0.93237 1.23354 0.97921 0.98564 0.97130 0.85305 0.85110 0.85365 0.84601 0.84605 0.89700 0.88072 0.76420 0.74164 0.83605 0.84187 0.82793 0.82792 0.84468 0.77190 1.17148 1.17849 0.84705 0.87889 0.90190 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 38. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.05 10.62 101.05 1.07 4.13 16 2 S 2.42 -4.80 5.35 -107.50 -0.58 -5.38 16 3 O -0.93 -1.99 18.10 -57.83 -1.05 -3.03 16 4 O -0.94 -1.71 18.10 -57.83 -1.05 -2.76 16 5 C -0.60 2.77 5.64 37.15 0.21 2.98 16 6 C -0.11 0.27 3.53 -89.81 -0.32 -0.04 16 7 H 0.10 -0.28 8.13 -51.93 -0.42 -0.70 16 8 C -0.15 0.14 7.43 -25.92 -0.19 -0.05 16 9 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 10 H 0.11 0.04 7.46 -51.93 -0.39 -0.34 16 11 N -0.71 0.16 5.21 -54.05 -0.28 -0.12 16 12 C 0.56 1.41 7.76 -12.46 -0.10 1.31 16 13 O -0.51 -2.93 14.74 -16.66 -0.25 -3.18 16 14 C -0.16 -0.22 5.88 -104.90 -0.62 -0.83 16 15 C 0.18 0.22 6.72 -38.63 -0.26 -0.04 16 16 O -0.47 -0.93 11.55 -40.61 -0.47 -1.39 16 17 C -0.15 0.11 9.96 -39.54 -0.39 -0.28 16 18 C -0.05 0.06 9.54 -39.15 -0.37 -0.31 16 19 C -0.03 0.00 5.87 -105.03 -0.62 -0.62 16 20 C 0.03 0.02 7.03 -36.49 -0.26 -0.23 16 21 C -0.19 -0.02 10.26 -39.37 -0.40 -0.43 16 22 C -0.17 -0.08 10.78 -39.80 -0.43 -0.51 16 23 C -0.05 -0.02 6.20 -35.56 -0.22 -0.24 16 24 C -0.03 0.02 2.98 36.00 0.11 0.13 16 25 O -0.52 -0.19 12.88 -35.23 -0.45 -0.64 16 26 Si 0.70 -0.54 32.11 -169.99 -5.46 -6.00 16 27 O -0.17 -0.16 8.80 4.57 0.04 -0.12 16 28 C -0.05 0.00 9.20 -38.78 -0.36 -0.35 16 29 C -0.13 0.42 7.39 -25.92 -0.19 0.22 16 30 H 0.13 -0.80 8.14 -51.92 -0.42 -1.23 16 31 H 0.13 -0.56 8.14 -51.92 -0.42 -0.99 16 32 H 0.13 -0.81 8.14 -51.92 -0.42 -1.23 16 33 H 0.14 -0.93 8.14 -51.93 -0.42 -1.35 16 34 H 0.14 -0.90 7.84 -51.92 -0.41 -1.30 16 35 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 36 H 0.10 -0.20 7.89 -51.93 -0.41 -0.61 16 37 H 0.40 -0.93 6.73 -40.82 -0.27 -1.20 16 38 H 0.40 -0.75 9.06 45.56 0.41 -0.34 16 39 H 0.15 -0.37 8.06 -52.48 -0.42 -0.80 16 40 H 0.14 -0.47 6.96 -52.49 -0.37 -0.84 16 41 H 0.15 -0.31 7.24 -52.49 -0.38 -0.69 16 42 H 0.15 -0.09 8.06 -52.49 -0.42 -0.51 16 43 H 0.14 -0.27 7.96 -51.93 -0.41 -0.69 16 44 H 0.38 -0.91 8.70 45.56 0.40 -0.52 16 45 H -0.25 -0.45 7.11 56.52 0.40 -0.05 16 46 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 47 H 0.14 -0.24 6.24 -52.48 -0.33 -0.57 16 48 H 0.10 -0.45 8.10 -51.93 -0.42 -0.87 16 49 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 LS Contribution 429.45 15.07 6.47 6.47 Total: 0.00 -15.22 429.45 -12.27 -27.49 By element: Atomic # 1 Polarization: -10.19 SS G_CDS: -5.58 Total: -15.77 kcal Atomic # 6 Polarization: 8.06 SS G_CDS: -3.62 Total: 4.43 kcal Atomic # 7 Polarization: 0.16 SS G_CDS: -0.28 Total: -0.12 kcal Atomic # 8 Polarization: -7.90 SS G_CDS: -3.22 Total: -11.12 kcal Atomic # 14 Polarization: -0.54 SS G_CDS: -5.46 Total: -6.00 kcal Atomic # 16 Polarization: -4.80 SS G_CDS: -0.58 Total: -5.38 kcal Total LS contribution 6.47 Total: 6.47 kcal Total: -15.22 -12.27 -27.49 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_13259648.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.064 kcal (2) G-P(sol) polarization free energy of solvation -15.221 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.267 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.489 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.21 seconds