Wall clock time and date at job start Tue Mar 9 2021 12:52:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.36411 * 125.80010 * 2 1 4 4 C 1.47382 * 127.19333 * 0.04052 * 3 2 1 5 5 O 1.21605 * 120.00097 * 359.97438 * 4 3 2 6 6 N 1.34777 * 120.00000 * 180.02562 * 4 3 2 7 7 C 1.46496 * 120.00063 * 179.97438 * 6 4 3 8 8 H 1.09003 * 112.85245 * 336.18976 * 7 6 4 9 9 C 1.53783 * 113.61523 * 107.49652 * 7 6 4 10 10 C 1.53779 * 87.08101 * 89.11948 * 9 7 6 11 11 H 1.08999 * 113.69049 * 270.87673 * 10 9 7 12 12 C 1.52998 * 113.61708 * 139.97932 * 10 9 7 13 13 S 1.81405 * 109.47071 * 87.50445 * 12 10 9 14 14 C 1.81393 * 101.92177 * 180.02562 * 13 12 10 15 15 O 1.42103 * 108.57624 * 294.48761 * 13 12 10 16 16 O 1.42100 * 108.57873 * 65.50907 * 13 12 10 17 17 C 1.53781 * 113.61607 * 204.99532 * 7 6 4 18 18 C 1.47025 * 105.61674 * 180.02562 * 3 2 1 19 19 C 1.34175 * 105.95166 * 359.97438 * 18 3 2 20 20 C 1.50701 * 125.43714 * 180.02562 * 19 18 3 21 21 O 1.42893 * 109.47122 * 300.00227 * 20 19 18 22 22 Si 1.86302 * 109.47170 * 180.02562 * 20 19 18 23 23 O 1.33646 * 125.80106 * 179.69032 * 2 1 3 24 24 H 1.09002 * 109.47152 * 89.99913 * 1 2 3 25 25 H 1.09001 * 109.46980 * 330.00014 * 1 2 3 26 26 H 1.09004 * 109.47113 * 209.99994 * 1 2 3 27 27 H 0.96999 * 119.99778 * 359.97438 * 6 4 3 28 28 H 1.09005 * 113.61409 * 203.66463 * 9 7 6 29 29 H 1.08994 * 113.61474 * 334.57032 * 9 7 6 30 30 H 1.09001 * 109.47145 * 207.49722 * 12 10 9 31 31 H 1.08997 * 109.47363 * 327.49960 * 12 10 9 32 32 H 1.09007 * 109.47206 * 59.99858 * 14 13 12 33 33 H 1.08999 * 109.46983 * 179.97438 * 14 13 12 34 34 H 1.09005 * 109.47202 * 299.99822 * 14 13 12 35 35 H 1.09000 * 113.61565 * 25.43408 * 17 7 6 36 36 H 1.09002 * 113.61493 * 156.32939 * 17 7 6 37 37 H 1.08000 * 127.02272 * 179.97438 * 18 3 2 38 38 H 1.09004 * 109.46762 * 60.00361 * 20 19 18 39 39 H 0.96704 * 114.00266 * 299.99572 * 21 20 19 40 40 H 1.48491 * 110.00204 * 180.02562 * 22 20 19 41 41 H 1.48504 * 109.99964 * 301.32311 * 22 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1064 0.0000 4 6 1.8739 2.5158 0.0008 5 8 0.6890 2.7892 0.0012 6 7 2.7930 3.5016 0.0002 7 6 2.3645 4.9025 0.0004 8 1 1.3616 5.0385 -0.4044 9 6 2.5904 5.6155 1.3441 10 6 3.9881 5.9877 0.8221 11 1 4.7519 5.2429 1.0460 12 6 4.4199 7.4096 1.1863 13 16 5.2217 7.3999 2.8136 14 6 5.6405 9.1508 3.0353 15 8 4.2563 7.0384 3.7917 16 8 6.4273 6.6537 2.7198 17 6 3.4052 5.8651 -0.5956 18 6 3.6849 0.5991 -0.0006 19 6 3.5859 -0.7390 -0.0004 20 6 4.7460 -1.7010 -0.0003 21 8 5.5425 -1.4867 -1.1671 22 14 4.1027 -3.4494 -0.0007 23 8 2.2888 -1.0839 0.0059 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3633 0.8900 0.5138 26 1 -0.3633 -0.8900 0.5139 27 1 3.7381 3.2834 -0.0004 28 1 1.9382 6.4754 1.4972 29 1 2.6093 4.9399 2.1992 30 1 5.1211 7.7793 0.4381 31 1 3.5448 8.0586 1.2163 32 1 4.7292 9.7483 3.0111 33 1 6.1381 9.2865 3.9956 34 1 6.3056 9.4698 2.2328 35 1 4.0818 5.3909 -1.3066 36 1 2.9758 6.7932 -0.9730 37 1 4.5928 1.1841 -0.0012 38 1 5.3536 -1.5372 0.8897 39 1 5.0653 -1.6154 -1.9982 40 1 5.2369 -4.4079 0.0000 41 1 3.2463 -3.6758 1.1912 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_13308374.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:42 Heat of formation + Delta-G solvation = -90.087522 kcal Electronic energy + Delta-G solvation = -26150.373664 eV Core-core repulsion = 22127.380416 eV Total energy + Delta-G solvation = -4022.993248 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 330.106 amu Computer time = 2.28 seconds Orbital eigenvalues (eV) -43.73049 -41.25459 -39.36295 -38.08965 -37.98577 -37.02128 -34.82439 -33.97827 -33.07396 -31.27679 -30.43967 -29.34844 -26.89421 -26.07810 -24.78654 -23.72543 -22.31510 -20.81750 -20.32785 -19.90679 -18.97198 -18.03469 -17.79005 -17.67604 -17.28549 -17.11049 -16.93737 -16.67462 -16.07868 -15.97574 -15.73183 -15.50215 -15.21229 -14.69655 -14.43651 -14.31529 -14.25143 -14.21969 -14.07599 -13.93482 -13.85427 -13.63385 -13.16585 -13.07426 -12.98412 -12.90282 -12.81475 -12.56616 -12.28597 -12.14227 -12.01038 -11.49168 -11.18582 -11.00375 -10.87156 -10.64811 -10.10210 -9.54522 -5.07414 -1.10033 0.31074 0.84656 1.11718 1.40973 1.66927 1.75045 1.90374 2.10613 2.34108 2.55457 2.88729 3.15080 3.20796 3.24874 3.37569 3.44397 3.60571 3.71538 3.74306 3.78086 3.78746 3.92055 4.11276 4.13128 4.23939 4.26412 4.41949 4.54468 4.55771 4.57140 4.57506 4.62511 4.72269 4.81554 4.82298 4.95293 4.99729 5.13533 5.22522 5.52403 5.92327 6.33919 6.47662 7.22677 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.097 3.903 3 C -0.255 4.255 4 C 0.597 3.403 5 O -0.536 6.536 6 N -0.709 5.709 7 C 0.121 3.879 8 H 0.111 0.889 9 C -0.151 4.151 10 C -0.107 4.107 11 H 0.104 0.896 12 C -0.601 4.601 13 S 2.418 3.582 14 C -0.659 4.659 15 O -0.934 6.934 16 O -0.940 6.940 17 C -0.130 4.130 18 C -0.149 4.149 19 C -0.056 4.056 20 C -0.028 4.028 21 O -0.530 6.530 22 Si 0.704 3.296 23 O -0.168 6.168 24 H 0.093 0.907 25 H 0.111 0.889 26 H 0.081 0.919 27 H 0.402 0.598 28 H 0.101 0.899 29 H 0.083 0.917 30 H 0.136 0.864 31 H 0.136 0.864 32 H 0.128 0.872 33 H 0.130 0.870 34 H 0.128 0.872 35 H 0.080 0.920 36 H 0.102 0.898 37 H 0.158 0.842 38 H 0.133 0.867 39 H 0.384 0.616 40 H -0.247 1.247 41 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.123 2.626 -4.527 5.235 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.044 3.956 3 C -0.259 4.259 4 C 0.386 3.614 5 O -0.415 6.415 6 N -0.360 5.360 7 C 0.016 3.984 8 H 0.129 0.871 9 C -0.190 4.190 10 C -0.126 4.126 11 H 0.122 0.878 12 C -0.730 4.730 13 S 2.600 3.400 14 C -0.808 4.808 15 O -0.931 6.931 16 O -0.937 6.937 17 C -0.169 4.169 18 C -0.168 4.168 19 C -0.104 4.104 20 C -0.139 4.139 21 O -0.335 6.335 22 Si 0.603 3.397 23 O -0.065 6.065 24 H 0.112 0.888 25 H 0.129 0.871 26 H 0.100 0.900 27 H 0.237 0.763 28 H 0.119 0.881 29 H 0.101 0.899 30 H 0.154 0.846 31 H 0.154 0.846 32 H 0.147 0.853 33 H 0.149 0.851 34 H 0.147 0.853 35 H 0.099 0.901 36 H 0.121 0.879 37 H 0.176 0.824 38 H 0.150 0.850 39 H 0.232 0.768 40 H -0.171 1.171 41 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges -0.213 1.182 -3.064 3.291 hybrid contribution 0.829 1.595 -0.178 1.806 sum 0.616 2.777 -3.243 4.313 Atomic orbital electron populations 1.20710 0.83287 1.05467 1.04820 1.22917 0.94081 0.82830 0.95813 1.21085 0.93283 0.93684 1.17841 1.17148 0.85344 0.83662 0.75245 1.90776 1.16472 1.83950 1.50268 1.45450 1.09774 1.05086 1.75669 1.21806 0.99881 0.79900 0.96861 0.87128 1.23653 0.95262 1.01635 0.98458 1.22368 0.98234 0.92942 0.99087 0.87809 1.30309 1.14181 1.05272 1.23229 1.07952 0.76088 0.78128 0.77859 1.30299 1.12413 1.25916 1.12152 1.93624 1.61874 1.81128 1.56458 1.93617 1.45640 1.67890 1.86531 1.23347 0.97950 1.00193 0.95417 1.22583 0.96444 0.93550 1.04223 1.22619 0.82925 0.95631 1.09219 1.24416 0.89760 1.07535 0.92143 1.86563 1.38232 1.93403 1.15350 0.94227 0.82085 0.74052 0.89301 1.83677 1.16357 1.35018 1.71420 0.88814 0.87107 0.89983 0.76300 0.88105 0.89859 0.84578 0.84609 0.85283 0.85144 0.85341 0.90109 0.87922 0.82418 0.84956 0.76805 1.17083 1.17699 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 49. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.01 9.89 36.01 0.36 0.37 16 2 C 0.10 0.16 7.37 -34.97 -0.26 -0.09 16 3 C -0.25 -0.52 6.31 -103.27 -0.65 -1.18 16 4 C 0.60 1.68 7.81 -12.54 -0.10 1.58 16 5 O -0.54 -2.89 14.44 5.27 0.08 -2.82 16 6 N -0.71 -0.13 5.26 -54.11 -0.28 -0.41 16 7 C 0.12 -0.07 4.32 -67.12 -0.29 -0.36 16 8 H 0.11 0.06 7.46 -51.93 -0.39 -0.33 16 9 C -0.15 0.11 7.43 -25.92 -0.19 -0.08 16 10 C -0.11 0.24 3.53 -89.81 -0.32 -0.08 16 11 H 0.10 -0.21 8.13 -51.93 -0.42 -0.64 16 12 C -0.60 2.62 5.64 37.16 0.21 2.83 16 13 S 2.42 -4.06 5.35 -107.50 -0.58 -4.64 16 14 C -0.66 2.91 10.62 101.05 1.07 3.99 16 15 O -0.93 -2.29 18.10 -57.83 -1.05 -3.33 16 16 O -0.94 -2.33 18.10 -57.83 -1.05 -3.38 16 17 C -0.13 0.38 7.39 -25.92 -0.19 0.19 16 18 C -0.15 -0.10 10.46 -37.45 -0.39 -0.49 16 19 C -0.06 -0.03 6.20 -35.74 -0.22 -0.25 16 20 C -0.03 0.02 2.98 36.01 0.11 0.13 16 21 O -0.53 0.50 12.86 -35.23 -0.45 0.05 16 22 Si 0.70 -0.80 32.08 -169.99 -5.45 -6.25 16 23 O -0.17 -0.22 8.89 7.65 0.07 -0.15 16 24 H 0.09 -0.11 8.14 -51.93 -0.42 -0.53 16 25 H 0.11 0.14 6.48 -51.93 -0.34 -0.20 16 26 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 27 H 0.40 -0.70 7.87 -40.82 -0.32 -1.03 16 28 H 0.10 -0.19 7.90 -51.93 -0.41 -0.60 16 29 H 0.08 0.09 8.14 -51.93 -0.42 -0.34 16 30 H 0.14 -0.89 8.14 -51.92 -0.42 -1.32 16 31 H 0.14 -0.87 7.84 -51.93 -0.41 -1.28 16 32 H 0.13 -0.79 8.14 -51.92 -0.42 -1.21 16 33 H 0.13 -0.53 8.14 -51.92 -0.42 -0.95 16 34 H 0.13 -0.78 8.14 -51.92 -0.42 -1.21 16 35 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 36 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 37 H 0.16 -0.19 7.74 -52.49 -0.41 -0.59 16 38 H 0.13 -0.15 7.96 -51.93 -0.41 -0.56 16 39 H 0.38 -1.79 8.70 45.56 0.40 -1.39 16 40 H -0.25 -0.33 7.11 56.52 0.40 0.07 16 41 H -0.25 -0.49 7.11 56.52 0.40 -0.09 16 LS Contribution 362.58 15.07 5.46 5.46 Total: 0.00 -13.37 362.58 -9.83 -23.20 By element: Atomic # 1 Polarization: -8.58 SS G_CDS: -5.71 Total: -14.29 kcal Atomic # 6 Polarization: 7.42 SS G_CDS: -0.87 Total: 6.56 kcal Atomic # 7 Polarization: -0.13 SS G_CDS: -0.28 Total: -0.41 kcal Atomic # 8 Polarization: -7.23 SS G_CDS: -2.40 Total: -9.63 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.45 Total: -6.25 kcal Atomic # 16 Polarization: -4.06 SS G_CDS: -0.58 Total: -4.64 kcal Total LS contribution 5.46 Total: 5.46 kcal Total: -13.37 -9.83 -23.20 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_13308374.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.889 kcal (2) G-P(sol) polarization free energy of solvation -13.372 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.261 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.826 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.199 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.088 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.28 seconds