Wall clock time and date at job start Tue Mar 9 2021 12:53:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81391 * 1 3 3 O 1.42105 * 108.57942 * 2 1 4 4 O 1.42097 * 108.57959 * 131.02529 * 2 1 3 5 5 C 1.81398 * 101.92304 * 245.51127 * 2 1 3 6 6 C 1.53004 * 109.47358 * 179.97438 * 5 2 1 7 7 H 1.09003 * 112.84414 * 43.80744 * 6 5 2 8 8 C 1.53782 * 113.61447 * 175.00077 * 6 5 2 9 9 C 1.53777 * 87.07826 * 139.98466 * 8 6 5 10 10 H 1.09000 * 113.61041 * 220.01378 * 9 8 6 11 11 N 1.46496 * 113.61505 * 89.11793 * 9 8 6 12 12 C 1.34777 * 120.00087 * 154.99642 * 11 9 8 13 13 O 1.21652 * 120.00283 * 0.02562 * 12 11 9 14 14 C 1.47046 * 120.00088 * 179.97438 * 12 11 9 15 15 C 1.36221 * 123.49415 * 179.70548 * 14 12 11 16 16 Cl 1.73597 * 124.60583 * 0.03409 * 15 14 12 17 17 S 1.70449 * 110.79142 * 179.91422 * 15 14 12 18 18 C 1.75497 * 92.46292 * 0.29900 * 17 15 14 19 19 C 1.50707 * 124.68198 * 179.82792 * 18 17 15 20 20 O 1.42891 * 109.47043 * 244.99925 * 19 18 17 21 21 Si 1.86306 * 109.47136 * 5.00256 * 19 18 17 22 22 C 1.32692 * 110.63246 * 359.83008 * 18 17 15 23 23 C 1.53772 * 113.61641 * 272.50133 * 6 5 2 24 24 H 1.09003 * 109.47583 * 54.49036 * 1 2 3 25 25 H 1.09003 * 109.47643 * 174.48586 * 1 2 3 26 26 H 1.09003 * 109.47254 * 294.48846 * 1 2 3 27 27 H 1.08998 * 109.47096 * 300.00087 * 5 2 1 28 28 H 1.09006 * 109.47169 * 59.99793 * 5 2 1 29 29 H 1.09007 * 113.61233 * 254.53290 * 8 6 5 30 30 H 1.09000 * 113.61529 * 25.34857 * 8 6 5 31 31 H 0.97005 * 120.00254 * 334.99342 * 11 9 8 32 32 H 1.08996 * 109.46492 * 125.00027 * 19 18 17 33 33 H 0.96702 * 114.00243 * 60.00177 * 20 19 18 34 34 H 1.48495 * 109.99586 * 179.97438 * 21 19 18 35 35 H 1.48500 * 109.99900 * 301.31633 * 21 19 18 36 36 H 1.07997 * 123.45111 * 180.02562 * 22 18 17 37 37 H 1.08999 * 113.61319 * 334.56440 * 23 6 5 38 38 H 1.09001 * 113.61890 * 105.47107 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2667 -0.8841 1.0161 5 6 2.1887 -0.7357 -1.6152 6 6 3.7054 -0.8184 -1.7984 7 1 4.2205 -1.1761 -0.9068 8 6 4.1317 -1.5405 -3.0875 9 6 5.2283 -0.4718 -3.2300 10 1 5.3772 -0.1331 -4.2552 11 7 6.4816 -0.8238 -2.5581 12 6 7.6453 -0.2911 -2.9804 13 8 7.6550 0.4824 -3.9193 14 6 8.9033 -0.6440 -2.3056 15 6 10.1186 -0.1530 -2.6764 16 17 10.3760 0.9550 -3.9877 17 16 11.3520 -0.7717 -1.6757 18 6 10.2161 -1.7238 -0.7359 19 6 10.5936 -2.6132 0.4207 20 8 10.3150 -3.9741 0.0857 21 14 12.4110 -2.4225 0.7835 22 6 8.9790 -1.5524 -1.1843 23 6 4.3236 0.4544 -2.4003 24 1 -0.3634 0.5969 -0.8365 25 1 -0.3634 -1.0229 -0.0987 26 1 -0.3634 0.4260 0.9352 27 1 1.7610 -1.7370 -1.6664 28 1 1.7609 -0.1171 -2.4043 29 1 4.5201 -2.5447 -2.9175 30 1 3.3806 -1.5052 -3.8766 31 1 6.4739 -1.4403 -1.8091 32 1 10.0158 -2.3300 1.3004 33 1 10.7958 -4.2948 -0.6896 34 1 12.7956 -3.2940 1.9225 35 1 13.2086 -2.7751 -0.4185 36 1 8.1171 -2.0414 -0.7549 37 1 3.6255 1.0364 -3.0020 38 1 4.8669 1.0608 -1.6756 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_13431040.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:10 Heat of formation + Delta-G solvation = -72.463599 kcal Electronic energy + Delta-G solvation = -25917.600722 eV Core-core repulsion = 21815.180210 eV Total energy + Delta-G solvation = -4102.420512 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.024 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -41.48617 -39.96467 -38.84631 -37.98298 -37.87929 -37.04188 -37.01454 -34.67468 -31.80475 -31.23150 -30.41866 -27.01335 -26.89340 -26.19127 -23.92364 -22.37583 -20.95967 -20.43957 -19.91460 -19.45113 -18.11736 -17.95467 -17.72965 -17.32522 -17.11149 -16.81829 -16.58981 -16.10141 -16.07085 -15.82777 -15.40105 -15.31342 -14.78520 -14.46995 -14.37604 -14.36491 -14.28865 -14.12226 -13.98255 -13.61983 -13.15223 -13.06726 -13.03012 -12.98006 -12.59882 -12.55682 -12.47204 -12.28558 -12.03579 -11.97358 -11.87355 -11.49065 -11.18527 -10.98153 -10.72172 -10.14649 -9.90899 -9.71146 -5.19673 -1.09736 -0.60693 -0.20859 0.42547 0.67732 1.04013 1.08936 1.40453 1.67113 1.77886 2.08933 2.24363 2.55527 2.88963 3.08771 3.20686 3.24795 3.34364 3.44398 3.60859 3.71877 3.76267 3.81077 3.85515 3.91969 4.11190 4.26182 4.28522 4.35564 4.54533 4.57495 4.57899 4.66784 4.73877 4.81126 4.88995 4.95736 4.98844 5.49703 6.15873 6.41121 7.18268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.418 3.582 3 O -0.933 6.933 4 O -0.939 6.939 5 C -0.602 4.602 6 C -0.107 4.107 7 H 0.104 0.896 8 C -0.130 4.130 9 C 0.122 3.878 10 H 0.111 0.889 11 N -0.709 5.709 12 C 0.580 3.420 13 O -0.515 6.515 14 C -0.160 4.160 15 C -0.114 4.114 16 Cl 0.027 6.973 17 S 0.239 5.761 18 C -0.233 4.233 19 C -0.032 4.032 20 O -0.521 6.521 21 Si 0.646 3.354 22 C -0.070 4.070 23 C -0.151 4.151 24 H 0.128 0.872 25 H 0.128 0.872 26 H 0.130 0.870 27 H 0.136 0.864 28 H 0.136 0.864 29 H 0.080 0.920 30 H 0.102 0.898 31 H 0.401 0.599 32 H 0.132 0.868 33 H 0.379 0.621 34 H -0.230 1.230 35 H -0.236 1.236 36 H 0.157 0.843 37 H 0.101 0.899 38 H 0.084 0.916 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.049 -2.728 0.406 3.436 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.600 3.400 3 O -0.930 6.930 4 O -0.937 6.937 5 C -0.730 4.730 6 C -0.126 4.126 7 H 0.122 0.878 8 C -0.169 4.169 9 C 0.016 3.984 10 H 0.129 0.871 11 N -0.361 5.361 12 C 0.365 3.635 13 O -0.390 6.390 14 C -0.179 4.179 15 C -0.261 4.261 16 Cl 0.056 6.944 17 S 0.504 5.496 18 C -0.350 4.350 19 C -0.145 4.145 20 O -0.328 6.328 21 Si 0.544 3.456 22 C -0.100 4.100 23 C -0.190 4.190 24 H 0.147 0.853 25 H 0.146 0.854 26 H 0.149 0.851 27 H 0.154 0.846 28 H 0.154 0.846 29 H 0.099 0.901 30 H 0.121 0.879 31 H 0.236 0.764 32 H 0.150 0.850 33 H 0.227 0.773 34 H -0.153 1.153 35 H -0.160 1.160 36 H 0.175 0.825 37 H 0.119 0.881 38 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 0.508 -1.904 0.881 2.159 hybrid contribution -2.681 -1.489 -1.191 3.290 sum -2.173 -3.393 -0.310 4.042 Atomic orbital electron populations 1.30302 1.26910 1.11587 1.12011 1.07946 0.78296 0.75998 0.77763 1.93626 1.78808 1.34197 1.86396 1.93615 1.79053 1.67114 1.53885 1.30314 1.05018 1.14149 1.23553 1.22373 0.90725 0.99611 0.99911 0.87770 1.23348 0.97891 0.98610 0.97070 1.21802 0.82472 0.96088 0.98041 0.87103 1.45492 1.05784 1.48632 1.36181 1.17384 0.82566 0.80499 0.83028 1.90882 1.86581 1.34030 1.27556 1.20200 0.93280 1.03796 1.00608 1.25540 0.99225 1.01777 0.99528 1.98443 1.95840 1.57644 1.42436 1.83409 1.06682 1.37807 1.21714 1.24753 0.97244 1.07521 1.05523 1.24409 1.13086 0.81177 0.95789 1.86645 1.69574 1.24722 1.51850 0.95172 0.73866 0.92633 0.83891 1.21016 0.97800 0.96698 0.94465 1.23649 0.99120 0.95974 1.00216 0.85292 0.85354 0.85136 0.84595 0.84617 0.90128 0.87928 0.76353 0.84997 0.77294 1.15255 1.15961 0.82523 0.88108 0.89763 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 30. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.01 10.62 101.05 1.07 4.08 16 2 S 2.42 -4.66 5.35 -107.50 -0.58 -5.24 16 3 O -0.93 -2.03 18.10 -57.83 -1.05 -3.08 16 4 O -0.94 -2.01 18.10 -57.83 -1.05 -3.06 16 5 C -0.60 2.74 5.64 37.16 0.21 2.95 16 6 C -0.11 0.27 3.53 -89.81 -0.32 -0.04 16 7 H 0.10 -0.27 8.13 -51.93 -0.42 -0.69 16 8 C -0.13 0.41 7.39 -25.92 -0.19 0.22 16 9 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 10 H 0.11 0.07 7.47 -51.93 -0.39 -0.32 16 11 N -0.71 0.22 5.24 -54.21 -0.28 -0.07 16 12 C 0.58 1.54 7.79 -12.69 -0.10 1.44 16 13 O -0.51 -3.06 14.51 5.23 0.08 -2.98 16 14 C -0.16 -0.23 5.98 -104.58 -0.63 -0.85 16 15 C -0.11 -0.20 6.87 30.01 0.21 0.00 16 16 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 17 S 0.24 -0.20 20.19 -107.50 -2.17 -2.37 16 18 C -0.23 0.33 5.65 -36.19 -0.20 0.13 16 19 C -0.03 0.07 2.94 36.01 0.11 0.18 16 20 O -0.52 0.50 12.88 -35.23 -0.45 0.05 16 21 Si 0.65 -1.49 30.92 -169.99 -5.26 -6.75 16 22 C -0.07 0.07 9.75 -39.00 -0.38 -0.31 16 23 C -0.15 0.15 7.43 -25.92 -0.19 -0.04 16 24 H 0.13 -0.80 8.14 -51.92 -0.42 -1.22 16 25 H 0.13 -0.80 8.14 -51.92 -0.42 -1.22 16 26 H 0.13 -0.55 8.14 -51.92 -0.42 -0.97 16 27 H 0.14 -0.91 8.14 -51.93 -0.42 -1.34 16 28 H 0.14 -0.89 7.84 -51.92 -0.41 -1.30 16 29 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 30 H 0.10 -0.43 8.10 -51.93 -0.42 -0.85 16 31 H 0.40 -1.07 7.24 -40.82 -0.30 -1.36 16 32 H 0.13 -0.42 7.96 -51.93 -0.41 -0.84 16 33 H 0.38 -1.39 8.70 45.56 0.40 -0.99 16 34 H -0.23 -0.12 7.11 56.52 0.40 0.28 16 35 H -0.24 0.18 7.11 56.52 0.40 0.58 16 36 H 0.16 -0.47 7.10 -52.49 -0.37 -0.84 16 37 H 0.10 -0.20 7.89 -51.93 -0.41 -0.61 16 38 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 LS Contribution 363.90 15.07 5.48 5.48 Total: 0.00 -12.88 363.90 -11.85 -24.74 By element: Atomic # 1 Polarization: -8.30 SS G_CDS: -4.47 Total: -12.77 kcal Atomic # 6 Polarization: 8.07 SS G_CDS: -0.71 Total: 7.36 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -0.28 Total: -0.07 kcal Atomic # 8 Polarization: -6.60 SS G_CDS: -2.47 Total: -9.07 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.26 Total: -6.75 kcal Atomic # 16 Polarization: -4.86 SS G_CDS: -2.75 Total: -7.61 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -12.88 -11.85 -24.74 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_13431040.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.727 kcal (2) G-P(sol) polarization free energy of solvation -12.881 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.609 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.855 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.736 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.464 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds