Wall clock time and date at job start Tue Mar 9 2021 12:53:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81391 * 1 3 3 O 1.42105 * 108.57942 * 2 1 4 4 O 1.42097 * 108.57959 * 131.02529 * 2 1 3 5 5 C 1.81398 * 101.92304 * 245.51127 * 2 1 3 6 6 C 1.53004 * 109.47358 * 179.97438 * 5 2 1 7 7 H 1.09003 * 112.84414 * 43.80744 * 6 5 2 8 8 C 1.53782 * 113.61447 * 175.00077 * 6 5 2 9 9 C 1.53777 * 87.07826 * 139.98466 * 8 6 5 10 10 H 1.09000 * 113.61041 * 220.01378 * 9 8 6 11 11 N 1.46496 * 113.61505 * 89.11793 * 9 8 6 12 12 C 1.34777 * 120.00087 * 154.99642 * 11 9 8 13 13 O 1.21652 * 120.00283 * 0.02562 * 12 11 9 14 14 C 1.47046 * 120.00088 * 179.97438 * 12 11 9 15 15 C 1.36221 * 123.49415 * 179.70548 * 14 12 11 16 16 Cl 1.73597 * 124.60583 * 0.03409 * 15 14 12 17 17 S 1.70449 * 110.79142 * 179.91422 * 15 14 12 18 18 C 1.75497 * 92.46292 * 0.29900 * 17 15 14 19 19 C 1.50707 * 124.68198 * 179.82792 * 18 17 15 20 20 O 1.42891 * 109.47043 * 244.99925 * 19 18 17 21 21 Si 1.86306 * 109.47136 * 5.00256 * 19 18 17 22 22 C 1.32692 * 110.63246 * 359.83008 * 18 17 15 23 23 C 1.53772 * 113.61641 * 272.50133 * 6 5 2 24 24 H 1.09003 * 109.47583 * 54.49036 * 1 2 3 25 25 H 1.09003 * 109.47643 * 174.48586 * 1 2 3 26 26 H 1.09003 * 109.47254 * 294.48846 * 1 2 3 27 27 H 1.08998 * 109.47096 * 300.00087 * 5 2 1 28 28 H 1.09006 * 109.47169 * 59.99793 * 5 2 1 29 29 H 1.09007 * 113.61233 * 254.53290 * 8 6 5 30 30 H 1.09000 * 113.61529 * 25.34857 * 8 6 5 31 31 H 0.97005 * 120.00254 * 334.99342 * 11 9 8 32 32 H 1.08996 * 109.46492 * 125.00027 * 19 18 17 33 33 H 0.96702 * 114.00243 * 60.00177 * 20 19 18 34 34 H 1.48495 * 109.99586 * 179.97438 * 21 19 18 35 35 H 1.48500 * 109.99900 * 301.31633 * 21 19 18 36 36 H 1.07997 * 123.45111 * 180.02562 * 22 18 17 37 37 H 1.08999 * 113.61319 * 334.56440 * 23 6 5 38 38 H 1.09001 * 113.61890 * 105.47107 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2667 -0.8841 1.0161 5 6 2.1887 -0.7357 -1.6152 6 6 3.7054 -0.8184 -1.7984 7 1 4.2205 -1.1761 -0.9068 8 6 4.1317 -1.5405 -3.0875 9 6 5.2283 -0.4718 -3.2300 10 1 5.3772 -0.1331 -4.2552 11 7 6.4816 -0.8238 -2.5581 12 6 7.6453 -0.2911 -2.9804 13 8 7.6550 0.4824 -3.9193 14 6 8.9033 -0.6440 -2.3056 15 6 10.1186 -0.1530 -2.6764 16 17 10.3760 0.9550 -3.9877 17 16 11.3520 -0.7717 -1.6757 18 6 10.2161 -1.7238 -0.7359 19 6 10.5936 -2.6132 0.4207 20 8 10.3150 -3.9741 0.0857 21 14 12.4110 -2.4225 0.7835 22 6 8.9790 -1.5524 -1.1843 23 6 4.3236 0.4544 -2.4003 24 1 -0.3634 0.5969 -0.8365 25 1 -0.3634 -1.0229 -0.0987 26 1 -0.3634 0.4260 0.9352 27 1 1.7610 -1.7370 -1.6664 28 1 1.7609 -0.1171 -2.4043 29 1 4.5201 -2.5447 -2.9175 30 1 3.3806 -1.5052 -3.8766 31 1 6.4739 -1.4403 -1.8091 32 1 10.0158 -2.3300 1.3004 33 1 10.7958 -4.2948 -0.6896 34 1 12.7956 -3.2940 1.9225 35 1 13.2086 -2.7751 -0.4185 36 1 8.1171 -2.0414 -0.7549 37 1 3.6255 1.0364 -3.0020 38 1 4.8669 1.0608 -1.6756 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534690_13431040.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:09 Heat of formation + Delta-G solvation = -78.987696 kcal Electronic energy + Delta-G solvation = -25917.883628 eV Core-core repulsion = 21815.180210 eV Total energy + Delta-G solvation = -4102.703418 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.024 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.50437 -39.91618 -38.82453 -37.99158 -37.94281 -37.04816 -36.97515 -34.70849 -31.76293 -31.00717 -30.11614 -26.96084 -26.72986 -26.17991 -23.79962 -22.35789 -20.94872 -20.36634 -19.77358 -19.45556 -18.04965 -17.88696 -17.60304 -17.21264 -16.97146 -16.78505 -16.51373 -16.13605 -16.02522 -15.80303 -15.33232 -15.17317 -14.73819 -14.48429 -14.37642 -14.08926 -13.97580 -13.93729 -13.89331 -13.45349 -13.10895 -12.98661 -12.97733 -12.88998 -12.62854 -12.50083 -12.36622 -12.22633 -12.09365 -11.83846 -11.82222 -11.32204 -11.04376 -10.97325 -10.74277 -10.20840 -9.91573 -9.68492 -5.04143 -0.87896 -0.66137 -0.21386 0.45290 0.68494 1.01953 1.17575 1.52130 1.89186 1.93626 2.08284 2.12608 2.77941 3.14072 3.22844 3.39115 3.46242 3.46429 3.65579 3.75579 3.82614 3.86919 4.09872 4.11262 4.22036 4.34611 4.41700 4.51602 4.54281 4.74177 4.77336 4.82850 4.84991 4.93537 4.98537 5.00581 5.03340 5.14728 5.54507 6.39748 6.41300 7.09327 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.646 4.646 2 S 2.410 3.590 3 O -0.988 6.988 4 O -0.991 6.991 5 C -0.584 4.584 6 C -0.111 4.111 7 H 0.100 0.900 8 C -0.112 4.112 9 C 0.109 3.891 10 H 0.093 0.907 11 N -0.696 5.696 12 C 0.572 3.428 13 O -0.557 6.557 14 C -0.169 4.169 15 C -0.138 4.138 16 Cl 0.004 6.996 17 S 0.267 5.733 18 C -0.225 4.225 19 C -0.031 4.031 20 O -0.535 6.535 21 Si 0.704 3.296 22 C -0.070 4.070 23 C -0.158 4.158 24 H 0.151 0.849 25 H 0.153 0.847 26 H 0.126 0.874 27 H 0.169 0.831 28 H 0.164 0.836 29 H 0.090 0.910 30 H 0.122 0.878 31 H 0.413 0.587 32 H 0.148 0.852 33 H 0.390 0.610 34 H -0.268 1.268 35 H -0.255 1.255 36 H 0.178 0.822 37 H 0.110 0.890 38 H 0.059 0.941 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.666 -4.322 0.404 5.682 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.798 4.798 2 S 2.599 3.401 3 O -0.985 6.985 4 O -0.988 6.988 5 C -0.715 4.715 6 C -0.131 4.131 7 H 0.119 0.881 8 C -0.151 4.151 9 C 0.004 3.996 10 H 0.111 0.889 11 N -0.348 5.348 12 C 0.359 3.641 13 O -0.436 6.436 14 C -0.188 4.188 15 C -0.285 4.285 16 Cl 0.033 6.967 17 S 0.533 5.467 18 C -0.342 4.342 19 C -0.143 4.143 20 O -0.343 6.343 21 Si 0.605 3.395 22 C -0.098 4.098 23 C -0.197 4.197 24 H 0.170 0.830 25 H 0.171 0.829 26 H 0.145 0.855 27 H 0.187 0.813 28 H 0.181 0.819 29 H 0.109 0.891 30 H 0.140 0.860 31 H 0.251 0.749 32 H 0.165 0.835 33 H 0.240 0.760 34 H -0.194 1.194 35 H -0.180 1.180 36 H 0.195 0.805 37 H 0.128 0.872 38 H 0.077 0.923 Dipole moment (debyes) X Y Z Total from point charges -1.100 -3.500 0.926 3.784 hybrid contribution -2.186 -1.056 -1.177 2.698 sum -3.287 -4.556 -0.251 5.623 Atomic orbital electron populations 1.30158 1.22998 1.13723 1.12925 1.07734 0.79532 0.74469 0.78350 1.93560 1.80661 1.36782 1.87471 1.93547 1.80849 1.67639 1.56781 1.30174 1.03795 1.16241 1.21303 1.22396 0.92149 0.98372 1.00135 0.88136 1.23320 0.96813 0.98075 0.96931 1.21938 0.82789 0.97806 0.97105 0.88878 1.45443 1.05348 1.47942 1.36091 1.17687 0.83624 0.80142 0.82695 1.90852 1.87242 1.36024 1.29479 1.20327 0.92688 1.04455 1.01359 1.25806 1.00561 1.02290 0.99826 1.98425 1.95962 1.58588 1.43708 1.83295 1.05722 1.37035 1.20669 1.24888 0.96967 1.07053 1.05320 1.24519 1.13266 0.80678 0.95824 1.86625 1.70022 1.25055 1.52621 0.94454 0.72775 0.91436 0.80802 1.21143 0.98774 0.96259 0.93669 1.23708 0.99415 0.96575 0.99972 0.83020 0.82912 0.85513 0.81266 0.81853 0.89094 0.86006 0.74948 0.83460 0.76044 1.19356 1.18007 0.80460 0.87164 0.92255 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 7.07 10.62 113.37 1.20 8.27 16 2 S 2.41 -9.05 5.35 -56.49 -0.30 -9.35 16 3 O -0.99 -5.88 18.10 -127.37 -2.31 -8.19 16 4 O -0.99 -5.25 18.10 -127.37 -2.30 -7.55 16 5 C -0.58 6.56 5.64 71.98 0.41 6.96 16 6 C -0.11 0.66 3.53 -10.27 -0.04 0.62 16 7 H 0.10 -0.52 8.13 -2.39 -0.02 -0.54 16 8 C -0.11 0.89 7.39 31.12 0.23 1.12 16 9 C 0.11 -0.11 4.32 45.52 0.20 0.09 16 10 H 0.09 0.26 7.47 -2.39 -0.02 0.24 16 11 N -0.70 -0.15 5.24 -443.67 -2.33 -2.47 16 12 C 0.57 3.97 7.79 86.55 0.67 4.64 16 13 O -0.56 -8.03 14.51 -4.20 -0.06 -8.10 16 14 C -0.17 -0.63 5.98 -19.84 -0.12 -0.75 16 15 C -0.14 -0.66 6.87 67.35 0.46 -0.19 16 16 Cl 0.00 0.04 27.20 -2.72 -0.07 -0.04 16 17 S 0.27 -0.42 20.19 -56.49 -1.14 -1.56 16 18 C -0.22 0.79 5.65 24.52 0.14 0.93 16 19 C -0.03 0.17 2.94 71.24 0.21 0.38 16 20 O -0.53 1.64 12.88 -148.98 -1.92 -0.28 16 21 Si 0.70 -3.47 30.92 68.60 2.12 -1.35 16 22 C -0.07 0.17 9.75 22.70 0.22 0.39 16 23 C -0.16 0.19 7.43 31.12 0.23 0.42 16 24 H 0.15 -2.30 8.14 -2.39 -0.02 -2.32 16 25 H 0.15 -2.37 8.14 -2.39 -0.02 -2.39 16 26 H 0.13 -1.18 8.14 -2.39 -0.02 -1.20 16 27 H 0.17 -2.94 8.14 -2.39 -0.02 -2.96 16 28 H 0.16 -2.66 7.84 -2.39 -0.02 -2.68 16 29 H 0.09 -0.85 8.14 -2.38 -0.02 -0.87 16 30 H 0.12 -1.38 8.10 -2.39 -0.02 -1.40 16 31 H 0.41 -2.17 7.24 -92.70 -0.67 -2.84 16 32 H 0.15 -1.20 7.96 -2.39 -0.02 -1.22 16 33 H 0.39 -3.24 8.70 -74.06 -0.64 -3.88 16 34 H -0.27 -0.46 7.11 99.48 0.71 0.25 16 35 H -0.25 0.45 7.11 99.48 0.71 1.15 16 36 H 0.18 -1.27 7.10 -2.91 -0.02 -1.29 16 37 H 0.11 -0.40 7.89 -2.39 -0.02 -0.42 16 38 H 0.06 0.23 8.14 -2.39 -0.02 0.21 16 Total: 0.00 -33.52 363.90 -4.64 -38.16 By element: Atomic # 1 Polarization: -22.00 SS G_CDS: -0.15 Total: -22.15 kcal Atomic # 6 Polarization: 19.06 SS G_CDS: 3.82 Total: 22.88 kcal Atomic # 7 Polarization: -0.15 SS G_CDS: -2.33 Total: -2.47 kcal Atomic # 8 Polarization: -17.52 SS G_CDS: -6.59 Total: -24.11 kcal Atomic # 14 Polarization: -3.47 SS G_CDS: 2.12 Total: -1.35 kcal Atomic # 16 Polarization: -9.46 SS G_CDS: -1.44 Total: -10.91 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -0.07 Total: -0.04 kcal Total: -33.52 -4.64 -38.16 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_13431040.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -40.829 kcal (2) G-P(sol) polarization free energy of solvation -33.515 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.345 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.643 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.158 kcal (6) G-S(sol) free energy of system = (1) + (5) -78.988 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds