Wall clock time and date at job start Tue Mar 9 2021 12:53:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81405 * 1 3 3 O 1.42101 * 108.57441 * 2 1 4 4 O 1.42099 * 108.57623 * 228.97225 * 2 1 3 5 5 C 1.81400 * 101.92087 * 114.48225 * 2 1 3 6 6 C 1.52999 * 109.46772 * 180.02562 * 5 2 1 7 7 H 1.08994 * 112.91027 * 316.25039 * 6 5 2 8 8 C 1.53777 * 113.61195 * 87.50741 * 6 5 2 9 9 C 1.53785 * 87.08241 * 139.97738 * 8 6 5 10 10 H 1.09002 * 113.61570 * 220.01842 * 9 8 6 11 11 N 1.46500 * 113.68813 * 89.12417 * 9 8 6 12 12 C 1.34781 * 119.99985 * 105.94035 * 11 9 8 13 13 O 1.21280 * 119.99799 * 359.97438 * 12 11 9 14 14 C 1.50701 * 119.99932 * 179.97438 * 12 11 9 15 15 O 1.42895 * 109.46838 * 179.97438 * 14 12 11 16 16 C 1.35902 * 117.00017 * 179.97438 * 15 14 12 17 17 C 1.38729 * 120.05541 * 359.73110 * 16 15 14 18 18 C 1.38146 * 119.94570 * 179.74176 * 17 16 15 19 19 C 1.38264 * 120.05537 * 0.50554 * 18 17 16 20 20 C 1.50694 * 119.94903 * 179.74712 * 19 18 17 21 21 O 1.42897 * 109.47458 * 120.01749 * 20 19 18 22 22 Si 1.86304 * 109.46760 * 0.02562 * 20 19 18 23 23 C 1.38268 * 120.11035 * 359.76728 * 19 18 17 24 24 C 1.38151 * 120.05722 * 359.97438 * 23 19 18 25 25 C 1.53781 * 87.08241 * 334.56547 * 9 8 6 26 26 H 1.08998 * 109.46917 * 305.51436 * 1 2 3 27 27 H 1.08999 * 109.46948 * 65.51541 * 1 2 3 28 28 H 1.09003 * 109.46748 * 185.51471 * 1 2 3 29 29 H 1.09005 * 109.46817 * 60.00559 * 5 2 1 30 30 H 1.08994 * 109.47385 * 300.00056 * 5 2 1 31 31 H 1.08999 * 113.61947 * 25.43164 * 8 6 5 32 32 H 1.08997 * 113.61348 * 254.52379 * 8 6 5 33 33 H 0.96998 * 120.00149 * 285.93056 * 11 9 8 34 34 H 1.08997 * 109.46730 * 299.99650 * 14 12 11 35 35 H 1.08994 * 109.46768 * 60.00057 * 14 12 11 36 36 H 1.08001 * 120.02500 * 359.97438 * 17 16 15 37 37 H 1.07997 * 119.97349 * 180.22969 * 18 17 16 38 38 H 1.09000 * 109.47164 * 240.02403 * 20 19 18 39 39 H 0.96696 * 114.00393 * 300.00484 * 21 20 19 40 40 H 1.48495 * 110.00029 * 58.68070 * 22 20 19 41 41 H 1.48503 * 110.00070 * 180.02562 * 22 20 19 42 42 H 1.08001 * 119.97673 * 179.97438 * 23 19 18 43 43 H 1.07998 * 120.02620 * 179.97438 * 24 23 19 44 44 H 1.09000 * 113.61578 * 139.97748 * 25 9 8 45 45 H 1.08997 * 113.61673 * 270.88717 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8141 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2667 -0.8842 -1.0161 5 6 2.1888 -0.7355 1.6153 6 6 3.7055 -0.8182 1.7984 7 1 4.2217 -1.1749 0.9072 8 6 4.3235 0.4548 2.4004 9 6 5.2283 -0.4714 3.2301 10 1 5.3771 -0.1326 4.2554 11 7 6.4823 -0.8242 2.5598 12 6 7.6417 -0.2675 2.9629 13 8 7.6467 0.5259 3.8802 14 6 8.9317 -0.6309 2.2738 15 8 10.0117 0.0849 2.8765 16 6 11.2539 -0.1306 2.3692 17 6 11.4305 -1.0169 1.3167 18 6 12.6936 -1.2302 0.7993 19 6 13.7826 -0.5690 1.3364 20 6 15.1601 -0.8077 0.7739 21 8 15.6958 0.4242 0.2866 22 14 15.0558 -2.0353 -0.6237 23 6 13.6100 0.3107 2.3891 24 6 12.3483 0.5314 2.9067 25 6 4.1318 -1.5402 3.0877 26 1 -0.3633 0.5970 0.8365 27 1 -0.3633 0.4259 -0.9353 28 1 -0.3633 -1.0230 0.0988 29 1 1.7611 -1.7369 1.6665 30 1 1.7611 -0.1169 2.4042 31 1 3.6254 1.0367 3.0021 32 1 4.8668 1.0611 1.6757 33 1 6.4782 -1.4586 1.8261 34 1 9.1063 -1.7024 2.3711 35 1 8.8662 -0.3677 1.2181 36 1 10.5807 -1.5369 0.8998 37 1 12.8310 -1.9173 -0.0224 38 1 15.8087 -1.2019 1.5562 39 1 15.1686 0.8328 -0.4134 40 1 14.1491 -1.5236 -1.6825 41 1 16.4080 -2.2799 -1.1868 42 1 14.4623 0.8257 2.8073 43 1 12.2141 1.2183 3.7292 44 1 4.5203 -2.5444 2.9177 45 1 3.3812 -1.5037 3.8772 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:46 Heat of formation + Delta-G solvation = -107.976725 kcal Electronic energy + Delta-G solvation = -28414.183981 eV Core-core repulsion = 24106.651239 eV Total energy + Delta-G solvation = -4307.532742 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.122 amu Computer time = 1.65 seconds Orbital eigenvalues (eV) -41.72324 -41.12897 -39.77044 -38.82384 -38.03905 -37.20067 -37.07385 -34.88531 -32.45669 -31.79705 -31.47153 -30.59076 -29.35726 -26.98086 -26.26237 -24.60302 -23.87230 -22.52589 -21.90295 -20.59130 -19.98230 -19.53747 -18.52572 -18.25674 -17.85133 -17.55870 -17.35064 -17.18504 -17.00138 -16.84614 -16.38454 -16.16113 -15.88007 -15.68727 -15.56425 -15.22789 -14.92913 -14.66324 -14.45359 -14.35202 -14.31111 -14.27554 -13.77679 -13.72740 -13.54307 -13.43004 -13.20435 -13.12494 -13.03672 -12.66140 -12.36319 -12.25195 -12.16432 -12.10865 -12.06268 -11.63087 -11.57464 -11.26744 -10.96374 -10.58350 -10.26273 -10.04359 -9.22928 -4.97257 -1.15136 0.28247 0.29663 1.29261 1.35547 1.41024 1.58783 1.61603 1.96618 2.46808 2.50636 2.65103 2.83299 3.12303 3.17292 3.34885 3.38233 3.40311 3.52588 3.67006 3.67817 3.70153 3.72207 3.85072 3.85699 3.86848 3.87226 4.04627 4.19591 4.26205 4.43253 4.46319 4.50550 4.53549 4.53741 4.62044 4.65998 4.71766 4.85985 4.89394 4.94851 5.14430 5.24510 5.35758 5.49756 5.67334 6.17348 6.32293 6.42300 7.01927 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.658 4.658 2 S 2.417 3.583 3 O -0.934 6.934 4 O -0.940 6.940 5 C -0.602 4.602 6 C -0.107 4.107 7 H 0.105 0.895 8 C -0.152 4.152 9 C 0.121 3.879 10 H 0.111 0.889 11 N -0.713 5.713 12 C 0.519 3.481 13 O -0.508 6.508 14 C 0.040 3.960 15 O -0.288 6.288 16 C 0.134 3.866 17 C -0.206 4.206 18 C -0.075 4.075 19 C -0.155 4.155 20 C -0.070 4.070 21 O -0.531 6.531 22 Si 0.681 3.319 23 C -0.051 4.051 24 C -0.145 4.145 25 C -0.128 4.128 26 H 0.129 0.871 27 H 0.130 0.870 28 H 0.128 0.872 29 H 0.137 0.863 30 H 0.136 0.864 31 H 0.102 0.898 32 H 0.084 0.916 33 H 0.404 0.596 34 H 0.097 0.903 35 H 0.096 0.904 36 H 0.132 0.868 37 H 0.130 0.870 38 H 0.118 0.882 39 H 0.376 0.624 40 H -0.261 1.261 41 H -0.257 1.257 42 H 0.135 0.865 43 H 0.136 0.864 44 H 0.081 0.919 45 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.769 -6.418 0.422 8.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.599 3.401 3 O -0.931 6.931 4 O -0.937 6.937 5 C -0.731 4.731 6 C -0.126 4.126 7 H 0.123 0.877 8 C -0.190 4.190 9 C 0.016 3.984 10 H 0.129 0.871 11 N -0.367 5.367 12 C 0.304 3.696 13 O -0.381 6.381 14 C -0.039 4.039 15 O -0.200 6.200 16 C 0.089 3.911 17 C -0.225 4.225 18 C -0.092 4.092 19 C -0.156 4.156 20 C -0.180 4.180 21 O -0.337 6.337 22 Si 0.583 3.417 23 C -0.069 4.069 24 C -0.164 4.164 25 C -0.168 4.168 26 H 0.148 0.852 27 H 0.149 0.851 28 H 0.147 0.853 29 H 0.155 0.845 30 H 0.154 0.846 31 H 0.120 0.880 32 H 0.102 0.898 33 H 0.238 0.762 34 H 0.115 0.885 35 H 0.114 0.886 36 H 0.150 0.850 37 H 0.148 0.852 38 H 0.136 0.864 39 H 0.223 0.777 40 H -0.186 1.186 41 H -0.183 1.183 42 H 0.153 0.847 43 H 0.154 0.846 44 H 0.100 0.900 45 H 0.122 0.878 Dipole moment (debyes) X Y Z Total from point charges -4.652 -5.669 0.194 7.336 hybrid contribution -1.032 0.348 -0.328 1.138 sum -5.684 -5.321 -0.134 7.787 Atomic orbital electron populations 1.30295 1.26770 1.11635 1.12069 1.07976 0.78379 0.76000 0.77781 1.93628 1.78851 1.34193 1.86397 1.93616 1.79100 1.67108 1.53881 1.30314 1.04965 1.14218 1.23575 1.22381 0.90812 0.99533 0.99918 0.87695 1.23659 0.99140 0.96016 1.00219 1.21829 0.82296 0.96304 0.98020 0.87150 1.45489 1.05950 1.47232 1.37981 1.20043 0.84470 0.81228 0.83854 1.90793 1.86401 1.32636 1.28284 1.22465 0.85360 0.98010 0.98078 1.86170 1.12887 1.64032 1.56931 1.19078 0.84373 0.94800 0.92878 1.21172 0.98721 1.02860 0.99744 1.20784 0.91787 0.97974 0.98701 1.20202 0.95497 1.00742 0.99158 1.24955 0.93504 0.93123 1.06402 1.86596 1.53179 1.36424 1.57486 0.95135 0.81292 0.86677 0.78600 1.20863 0.96346 0.95604 0.94095 1.20539 0.90275 1.02716 1.02844 1.23343 0.97772 0.98525 0.97116 0.85248 0.85097 0.85306 0.84511 0.84563 0.88004 0.89775 0.76152 0.88495 0.88595 0.85030 0.85245 0.86431 0.77652 1.18567 1.18252 0.84744 0.84623 0.89995 0.87820 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.26 10.62 101.05 1.07 4.34 16 2 S 2.42 -5.69 5.35 -107.50 -0.58 -6.27 16 3 O -0.93 -1.72 18.10 -57.83 -1.05 -2.76 16 4 O -0.94 -1.57 18.10 -57.83 -1.05 -2.62 16 5 C -0.60 3.13 5.64 37.16 0.21 3.34 16 6 C -0.11 0.37 3.54 -89.80 -0.32 0.05 16 7 H 0.10 -0.39 8.13 -51.93 -0.42 -0.81 16 8 C -0.15 0.26 7.43 -25.92 -0.19 0.07 16 9 C 0.12 -0.22 4.30 -67.12 -0.29 -0.51 16 10 H 0.11 -0.02 7.50 -51.93 -0.39 -0.41 16 11 N -0.71 1.53 5.27 -53.01 -0.28 1.25 16 12 C 0.52 0.52 7.91 -10.98 -0.09 0.43 16 13 O -0.51 -3.05 16.12 -14.35 -0.23 -3.28 16 14 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 15 O -0.29 -0.75 9.67 -39.34 -0.38 -1.14 16 16 C 0.13 0.22 6.69 -39.22 -0.26 -0.05 16 17 C -0.21 0.09 9.04 -39.43 -0.36 -0.27 16 18 C -0.07 0.04 8.66 -39.61 -0.34 -0.30 16 19 C -0.16 -0.04 5.39 -104.60 -0.56 -0.60 16 20 C -0.07 0.01 2.82 36.00 0.10 0.11 16 21 O -0.53 -0.75 12.77 -35.23 -0.45 -1.20 16 22 Si 0.68 -0.69 29.78 -169.99 -5.06 -5.75 16 23 C -0.05 -0.05 9.60 -39.60 -0.38 -0.43 16 24 C -0.15 -0.25 9.99 -39.43 -0.39 -0.64 16 25 C -0.13 0.54 7.38 -25.91 -0.19 0.35 16 26 H 0.13 -0.85 8.14 -51.92 -0.42 -1.27 16 27 H 0.13 -0.60 8.14 -51.92 -0.42 -1.02 16 28 H 0.13 -0.86 8.14 -51.92 -0.42 -1.28 16 29 H 0.14 -1.02 8.14 -51.92 -0.42 -1.44 16 30 H 0.14 -0.97 7.84 -51.93 -0.41 -1.38 16 31 H 0.10 -0.26 7.89 -51.93 -0.41 -0.67 16 32 H 0.08 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.40 -2.12 8.71 -40.82 -0.36 -2.48 16 34 H 0.10 -0.39 7.65 -51.93 -0.40 -0.79 16 35 H 0.10 -0.34 7.68 -51.93 -0.40 -0.74 16 36 H 0.13 -0.42 6.30 -52.49 -0.33 -0.75 16 37 H 0.13 -0.33 4.87 -52.49 -0.26 -0.58 16 38 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 39 H 0.38 -0.49 8.70 45.56 0.40 -0.09 16 40 H -0.26 -0.23 7.11 56.52 0.40 0.17 16 41 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 42 H 0.13 0.02 8.06 -52.49 -0.42 -0.40 16 43 H 0.14 0.17 8.06 -52.49 -0.42 -0.25 16 44 H 0.08 -0.40 8.14 -51.93 -0.42 -0.83 16 45 H 0.10 -0.53 8.10 -51.93 -0.42 -0.95 16 LS Contribution 389.90 15.07 5.88 5.88 Total: 0.00 -15.63 389.90 -11.38 -27.01 By element: Atomic # 1 Polarization: -10.78 SS G_CDS: -6.38 Total: -17.17 kcal Atomic # 6 Polarization: 7.84 SS G_CDS: -1.80 Total: 6.04 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -0.28 Total: 1.25 kcal Atomic # 8 Polarization: -7.84 SS G_CDS: -3.15 Total: -10.99 kcal Atomic # 14 Polarization: -0.69 SS G_CDS: -5.06 Total: -5.75 kcal Atomic # 16 Polarization: -5.69 SS G_CDS: -0.58 Total: -6.27 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -15.63 -11.38 -27.01 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -80.964 kcal (2) G-P(sol) polarization free energy of solvation -15.628 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.592 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.013 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.977 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.65 seconds