Wall clock time and date at job start Tue Mar 9 2021 12:53:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81393 * 1 3 3 O 1.42099 * 108.57770 * 2 1 4 4 O 1.42093 * 108.58136 * 228.97126 * 2 1 3 5 5 C 1.81404 * 101.92151 * 114.48303 * 2 1 3 6 6 C 1.53000 * 109.46946 * 180.02562 * 5 2 1 7 7 H 1.08996 * 112.85005 * 316.18932 * 6 5 2 8 8 C 1.53775 * 113.61825 * 87.50558 * 6 5 2 9 9 C 1.53776 * 87.08393 * 139.97637 * 8 6 5 10 10 H 1.09001 * 113.61681 * 220.01520 * 9 8 6 11 11 N 1.46505 * 113.68717 * 89.12583 * 9 8 6 12 12 C 1.34782 * 119.99564 * 107.46492 * 11 9 8 13 13 O 1.21275 * 120.00321 * 359.97438 * 12 11 9 14 14 C 1.50700 * 119.99578 * 179.97438 * 12 11 9 15 15 C 1.53005 * 109.47134 * 180.02562 * 14 12 11 16 16 O 1.42899 * 109.47047 * 180.02562 * 15 14 12 17 17 C 1.35901 * 116.99910 * 179.97438 * 16 15 14 18 18 C 1.38739 * 120.05313 * 359.73148 * 17 16 15 19 19 C 1.38146 * 119.94185 * 179.70040 * 18 17 16 20 20 C 1.38271 * 120.05335 * 0.59414 * 19 18 17 21 21 C 1.50696 * 119.94274 * 179.70489 * 20 19 18 22 22 O 1.42901 * 109.47289 * 119.97299 * 21 20 19 23 23 Si 1.86306 * 109.47045 * 359.97438 * 21 20 19 24 24 C 1.38266 * 120.11309 * 359.68109 * 20 19 18 25 25 C 1.38143 * 120.05354 * 0.02562 * 24 20 19 26 26 C 1.53774 * 87.08069 * 334.56900 * 9 8 6 27 27 H 1.09008 * 109.47605 * 305.51590 * 1 2 3 28 28 H 1.08997 * 109.47133 * 65.51743 * 1 2 3 29 29 H 1.09005 * 109.47147 * 185.51549 * 1 2 3 30 30 H 1.09002 * 109.47124 * 60.00027 * 5 2 1 31 31 H 1.09001 * 109.46975 * 300.00148 * 5 2 1 32 32 H 1.09005 * 113.61502 * 254.53312 * 8 6 5 33 33 H 1.08999 * 113.61676 * 25.42734 * 8 6 5 34 34 H 0.97000 * 120.00254 * 287.46324 * 11 9 8 35 35 H 1.08997 * 109.47570 * 300.00467 * 14 12 11 36 36 H 1.09000 * 109.47110 * 60.00290 * 14 12 11 37 37 H 1.09001 * 109.46806 * 300.00540 * 15 14 12 38 38 H 1.09000 * 109.46889 * 60.00150 * 15 14 12 39 39 H 1.08000 * 120.02775 * 359.97438 * 18 17 16 40 40 H 1.07995 * 119.97304 * 180.27399 * 19 18 17 41 41 H 1.08996 * 109.47361 * 239.97782 * 21 20 19 42 42 H 0.96695 * 114.00692 * 300.00402 * 22 21 20 43 43 H 1.48500 * 110.00056 * 58.68286 * 23 21 20 44 44 H 1.48509 * 109.99679 * 180.02562 * 23 21 20 45 45 H 1.08001 * 119.97265 * 180.02562 * 24 20 19 46 46 H 1.08006 * 120.02522 * 180.02562 * 25 24 20 47 47 H 1.09006 * 113.61277 * 270.88016 * 26 9 8 48 48 H 1.09001 * 113.69334 * 139.99428 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 8 2.2666 1.3469 0.0000 4 8 2.2667 -0.8841 -1.0160 5 6 2.1887 -0.7356 1.6153 6 6 3.7054 -0.8183 1.7985 7 1 4.2205 -1.1761 0.9071 8 6 4.3236 0.4546 2.4004 9 6 5.2282 -0.4716 3.2301 10 1 5.3772 -0.1327 4.2554 11 7 6.4822 -0.8245 2.5598 12 6 7.6456 -0.2914 2.9828 13 8 7.6543 0.4808 3.9179 14 6 8.9356 -0.6548 2.2936 15 6 10.0971 0.0814 2.9643 16 8 11.3203 -0.2628 2.3105 17 6 12.4569 0.3101 2.7867 18 6 12.3954 1.1898 3.8578 19 6 13.5530 1.7661 4.3440 20 6 14.7706 1.4762 3.7563 21 6 16.0309 2.1114 4.2845 22 8 16.9314 1.0915 4.7215 23 14 15.6114 3.2252 5.7178 24 6 14.8337 0.6042 2.6851 25 6 13.6798 0.0207 2.1991 26 6 4.1317 -1.5402 3.0876 27 1 -0.3634 0.5970 0.8365 28 1 -0.3633 0.4259 -0.9352 29 1 -0.3634 -1.0229 0.0988 30 1 1.7610 -1.7369 1.6666 31 1 1.7609 -0.1169 2.4043 32 1 4.8668 1.0610 1.6756 33 1 3.6255 1.0367 3.0020 34 1 6.4752 -1.4418 1.8116 35 1 9.0965 -1.7303 2.3674 36 1 8.8803 -0.3669 1.2438 37 1 9.9364 1.1570 2.8909 38 1 10.1523 -0.2069 4.0141 39 1 11.4440 1.4205 4.3138 40 1 13.5063 2.4475 5.1805 41 1 16.5011 2.6972 3.4947 42 1 16.5783 0.5300 5.4251 43 1 14.9410 2.4444 6.7885 44 1 16.8461 3.8582 6.2474 45 1 15.7860 0.3791 2.2281 46 1 13.7297 -0.6607 1.3626 47 1 3.3811 -1.5036 3.8772 48 1 4.5187 -2.5450 2.9179 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_4549602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:50 Heat of formation + Delta-G solvation = -118.306162 kcal Electronic energy + Delta-G solvation = -29981.036737 eV Core-core repulsion = 25517.518458 eV Total energy + Delta-G solvation = -4463.518279 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 1.85 seconds Orbital eigenvalues (eV) -41.59742 -41.16197 -39.78108 -39.05492 -38.03332 -37.22332 -37.06935 -34.85384 -33.39317 -32.02924 -31.53106 -31.11841 -30.40804 -26.97189 -26.68797 -25.73659 -24.29323 -23.41278 -22.21951 -21.67034 -20.55399 -19.97567 -19.51582 -18.42618 -18.02156 -17.76064 -17.51376 -17.30577 -17.19920 -17.11037 -16.85995 -16.34585 -16.14344 -16.03541 -15.86842 -15.52117 -15.45169 -14.78857 -14.67347 -14.51831 -14.38443 -14.32789 -14.28499 -14.20819 -14.03046 -13.68261 -13.39401 -13.23590 -13.12554 -13.03174 -12.92657 -12.84869 -12.61870 -12.34676 -12.15457 -12.06253 -12.02201 -11.78640 -11.56921 -11.53237 -11.25354 -11.05309 -10.54055 -10.23547 -9.97286 -9.14519 -4.91722 -1.14628 0.35200 0.37550 1.34051 1.45112 1.61366 1.62971 1.63845 2.00321 2.39909 2.50604 2.72232 2.83786 3.13602 3.18246 3.37548 3.42556 3.46277 3.53427 3.68038 3.70350 3.73004 3.81218 3.83802 3.86272 3.86634 3.99808 4.05292 4.20186 4.26247 4.32602 4.41251 4.47515 4.50557 4.53802 4.57216 4.59089 4.62759 4.65666 4.73240 4.78127 4.86886 4.90686 5.01528 5.23915 5.34843 5.38613 5.55114 5.76814 6.26666 6.39263 6.45631 7.03023 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.417 3.583 3 O -0.933 6.933 4 O -0.939 6.939 5 C -0.602 4.602 6 C -0.107 4.107 7 H 0.105 0.895 8 C -0.151 4.151 9 C 0.118 3.882 10 H 0.110 0.890 11 N -0.713 5.713 12 C 0.524 3.476 13 O -0.534 6.534 14 C -0.142 4.142 15 C 0.074 3.926 16 O -0.316 6.316 17 C 0.138 3.862 18 C -0.203 4.203 19 C -0.075 4.075 20 C -0.157 4.157 21 C -0.069 4.069 22 O -0.531 6.531 23 Si 0.680 3.320 24 C -0.053 4.053 25 C -0.151 4.151 26 C -0.130 4.130 27 H 0.129 0.871 28 H 0.131 0.869 29 H 0.128 0.872 30 H 0.136 0.864 31 H 0.136 0.864 32 H 0.083 0.917 33 H 0.101 0.899 34 H 0.405 0.595 35 H 0.108 0.892 36 H 0.109 0.891 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.134 0.866 40 H 0.129 0.871 41 H 0.118 0.882 42 H 0.376 0.624 43 H -0.261 1.261 44 H -0.257 1.257 45 H 0.133 0.867 46 H 0.133 0.867 47 H 0.102 0.898 48 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.544 -2.540 0.623 7.047 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.599 3.401 3 O -0.931 6.931 4 O -0.937 6.937 5 C -0.731 4.731 6 C -0.126 4.126 7 H 0.123 0.877 8 C -0.190 4.190 9 C 0.013 3.987 10 H 0.128 0.872 11 N -0.365 5.365 12 C 0.311 3.689 13 O -0.411 6.411 14 C -0.182 4.182 15 C -0.002 4.002 16 O -0.230 6.230 17 C 0.092 3.908 18 C -0.221 4.221 19 C -0.093 4.093 20 C -0.158 4.158 21 C -0.179 4.179 22 O -0.337 6.337 23 Si 0.582 3.418 24 C -0.071 4.071 25 C -0.169 4.169 26 C -0.169 4.169 27 H 0.147 0.853 28 H 0.149 0.851 29 H 0.147 0.853 30 H 0.155 0.845 31 H 0.154 0.846 32 H 0.102 0.898 33 H 0.119 0.881 34 H 0.239 0.761 35 H 0.126 0.874 36 H 0.127 0.873 37 H 0.093 0.907 38 H 0.091 0.909 39 H 0.152 0.848 40 H 0.146 0.854 41 H 0.135 0.865 42 H 0.223 0.777 43 H -0.186 1.186 44 H -0.182 1.182 45 H 0.151 0.849 46 H 0.151 0.849 47 H 0.121 0.879 48 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges -5.508 -1.368 0.883 5.744 hybrid contribution -0.760 -1.713 0.604 1.969 sum -6.268 -3.082 1.487 7.141 Atomic orbital electron populations 1.30298 1.26794 1.11634 1.12065 1.07976 0.78369 0.76006 0.77782 1.93625 1.78846 1.34195 1.86398 1.93617 1.79073 1.67097 1.53866 1.30318 1.04996 1.14202 1.23570 1.22373 0.90785 0.99539 0.99932 0.87698 1.23646 0.99148 0.95996 1.00197 1.21830 0.82665 0.96187 0.98034 0.87204 1.45646 1.05974 1.48566 1.36335 1.20309 0.84933 0.80170 0.83499 1.90755 1.87084 1.34682 1.28535 1.21476 0.90944 1.03637 1.02162 1.22426 0.81018 1.00170 0.96572 1.85976 1.13741 1.66221 1.57028 1.18995 0.86277 0.92596 0.92897 1.21269 0.99875 1.01575 0.99402 1.20803 0.91719 0.98045 0.98712 1.20181 0.94949 1.01681 0.98945 1.24932 0.90287 0.95287 1.07369 1.86588 1.42832 1.46421 1.57906 0.95051 0.83537 0.85043 0.78167 1.20829 0.97774 0.94133 0.94403 1.20504 0.89678 1.04019 1.02719 1.23344 0.97880 0.98595 0.97090 0.85257 0.85088 0.85310 0.84536 0.84596 0.89788 0.88095 0.76055 0.87363 0.87251 0.90732 0.90898 0.84784 0.85352 0.86468 0.77693 1.18598 1.18234 0.84896 0.84865 0.87948 0.90062 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.22 10.62 101.05 1.07 4.29 16 2 S 2.42 -5.46 5.35 -107.50 -0.58 -6.04 16 3 O -0.93 -1.70 18.10 -57.83 -1.05 -2.75 16 4 O -0.94 -1.72 18.10 -57.83 -1.05 -2.77 16 5 C -0.60 3.05 5.64 37.16 0.21 3.26 16 6 C -0.11 0.35 3.54 -89.81 -0.32 0.03 16 7 H 0.10 -0.35 8.13 -51.93 -0.42 -0.78 16 8 C -0.15 0.28 7.43 -25.92 -0.19 0.09 16 9 C 0.12 -0.23 4.32 -67.12 -0.29 -0.52 16 10 H 0.11 -0.05 7.46 -51.93 -0.39 -0.44 16 11 N -0.71 1.58 5.27 -53.02 -0.28 1.30 16 12 C 0.52 -0.04 7.83 -10.98 -0.09 -0.12 16 13 O -0.53 -2.03 15.58 5.56 0.09 -1.94 16 14 C -0.14 0.29 6.07 -27.88 -0.17 0.12 16 15 C 0.07 0.00 4.03 37.16 0.15 0.15 16 16 O -0.32 -0.49 10.14 -19.43 -0.20 -0.69 16 17 C 0.14 0.27 6.69 -39.22 -0.26 0.01 16 18 C -0.20 -0.25 9.04 -39.43 -0.36 -0.61 16 19 C -0.08 -0.05 8.66 -39.60 -0.34 -0.40 16 20 C -0.16 -0.15 5.39 -104.60 -0.56 -0.71 16 21 C -0.07 -0.03 2.82 36.00 0.10 0.07 16 22 O -0.53 -0.95 12.77 -35.23 -0.45 -1.40 16 23 Si 0.68 -0.14 29.78 -169.99 -5.06 -5.21 16 24 C -0.05 -0.06 9.60 -39.61 -0.38 -0.44 16 25 C -0.15 -0.23 9.99 -39.44 -0.39 -0.62 16 26 C -0.13 0.52 7.39 -25.92 -0.19 0.33 16 27 H 0.13 -0.85 8.14 -51.92 -0.42 -1.27 16 28 H 0.13 -0.59 8.14 -51.93 -0.42 -1.02 16 29 H 0.13 -0.85 8.14 -51.92 -0.42 -1.27 16 30 H 0.14 -0.99 8.14 -51.92 -0.42 -1.41 16 31 H 0.14 -0.96 7.84 -51.92 -0.41 -1.37 16 32 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 33 H 0.10 -0.27 7.90 -51.93 -0.41 -0.68 16 34 H 0.40 -1.90 8.70 -40.82 -0.36 -2.26 16 35 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 36 H 0.11 -0.36 8.14 -51.93 -0.42 -0.78 16 37 H 0.07 0.03 7.61 -51.93 -0.39 -0.37 16 38 H 0.07 0.02 7.63 -51.93 -0.40 -0.37 16 39 H 0.13 0.02 6.30 -52.49 -0.33 -0.31 16 40 H 0.13 -0.13 4.87 -52.49 -0.26 -0.38 16 41 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 42 H 0.38 -0.34 8.70 45.56 0.40 0.05 16 43 H -0.26 -0.48 7.11 56.52 0.40 -0.08 16 44 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 45 H 0.13 0.04 8.06 -52.49 -0.42 -0.39 16 46 H 0.13 0.04 8.06 -52.48 -0.42 -0.38 16 47 H 0.10 -0.51 8.10 -51.93 -0.42 -0.93 16 48 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 LS Contribution 410.81 15.07 6.19 6.19 Total: 0.00 -14.04 410.81 -11.61 -25.66 By element: Atomic # 1 Polarization: -10.07 SS G_CDS: -7.22 Total: -17.30 kcal Atomic # 6 Polarization: 6.95 SS G_CDS: -2.01 Total: 4.93 kcal Atomic # 7 Polarization: 1.58 SS G_CDS: -0.28 Total: 1.30 kcal Atomic # 8 Polarization: -6.89 SS G_CDS: -2.65 Total: -9.54 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.06 Total: -5.21 kcal Atomic # 16 Polarization: -5.46 SS G_CDS: -0.58 Total: -6.04 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -14.04 -11.61 -25.66 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_4549602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.649 kcal (2) G-P(sol) polarization free energy of solvation -14.043 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.615 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.657 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.306 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.85 seconds