Wall clock time and date at job start Tue Mar 9 2021 12:53:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81393 * 1 3 3 O 1.42099 * 108.57770 * 2 1 4 4 O 1.42093 * 108.58136 * 228.97126 * 2 1 3 5 5 C 1.81404 * 101.92151 * 114.48303 * 2 1 3 6 6 C 1.53000 * 109.46946 * 180.02562 * 5 2 1 7 7 H 1.08996 * 112.85005 * 316.18932 * 6 5 2 8 8 C 1.53775 * 113.61825 * 87.50558 * 6 5 2 9 9 C 1.53776 * 87.08393 * 139.97637 * 8 6 5 10 10 H 1.09001 * 113.61681 * 220.01520 * 9 8 6 11 11 N 1.46505 * 113.68717 * 89.12583 * 9 8 6 12 12 C 1.34782 * 119.99564 * 107.46492 * 11 9 8 13 13 O 1.21275 * 120.00321 * 359.97438 * 12 11 9 14 14 C 1.50700 * 119.99578 * 179.97438 * 12 11 9 15 15 C 1.53005 * 109.47134 * 180.02562 * 14 12 11 16 16 O 1.42899 * 109.47047 * 180.02562 * 15 14 12 17 17 C 1.35901 * 116.99910 * 179.97438 * 16 15 14 18 18 C 1.38739 * 120.05313 * 359.73148 * 17 16 15 19 19 C 1.38146 * 119.94185 * 179.70040 * 18 17 16 20 20 C 1.38271 * 120.05335 * 0.59414 * 19 18 17 21 21 C 1.50696 * 119.94274 * 179.70489 * 20 19 18 22 22 O 1.42901 * 109.47289 * 119.97299 * 21 20 19 23 23 Si 1.86306 * 109.47045 * 359.97438 * 21 20 19 24 24 C 1.38266 * 120.11309 * 359.68109 * 20 19 18 25 25 C 1.38143 * 120.05354 * 0.02562 * 24 20 19 26 26 C 1.53774 * 87.08069 * 334.56900 * 9 8 6 27 27 H 1.09008 * 109.47605 * 305.51590 * 1 2 3 28 28 H 1.08997 * 109.47133 * 65.51743 * 1 2 3 29 29 H 1.09005 * 109.47147 * 185.51549 * 1 2 3 30 30 H 1.09002 * 109.47124 * 60.00027 * 5 2 1 31 31 H 1.09001 * 109.46975 * 300.00148 * 5 2 1 32 32 H 1.09005 * 113.61502 * 254.53312 * 8 6 5 33 33 H 1.08999 * 113.61676 * 25.42734 * 8 6 5 34 34 H 0.97000 * 120.00254 * 287.46324 * 11 9 8 35 35 H 1.08997 * 109.47570 * 300.00467 * 14 12 11 36 36 H 1.09000 * 109.47110 * 60.00290 * 14 12 11 37 37 H 1.09001 * 109.46806 * 300.00540 * 15 14 12 38 38 H 1.09000 * 109.46889 * 60.00150 * 15 14 12 39 39 H 1.08000 * 120.02775 * 359.97438 * 18 17 16 40 40 H 1.07995 * 119.97304 * 180.27399 * 19 18 17 41 41 H 1.08996 * 109.47361 * 239.97782 * 21 20 19 42 42 H 0.96695 * 114.00692 * 300.00402 * 22 21 20 43 43 H 1.48500 * 110.00056 * 58.68286 * 23 21 20 44 44 H 1.48509 * 109.99679 * 180.02562 * 23 21 20 45 45 H 1.08001 * 119.97265 * 180.02562 * 24 20 19 46 46 H 1.08006 * 120.02522 * 180.02562 * 25 24 20 47 47 H 1.09006 * 113.61277 * 270.88016 * 26 9 8 48 48 H 1.09001 * 113.69334 * 139.99428 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8139 0.0000 0.0000 3 8 2.2666 1.3469 0.0000 4 8 2.2667 -0.8841 -1.0160 5 6 2.1887 -0.7356 1.6153 6 6 3.7054 -0.8183 1.7985 7 1 4.2205 -1.1761 0.9071 8 6 4.3236 0.4546 2.4004 9 6 5.2282 -0.4716 3.2301 10 1 5.3772 -0.1327 4.2554 11 7 6.4822 -0.8245 2.5598 12 6 7.6456 -0.2914 2.9828 13 8 7.6543 0.4808 3.9179 14 6 8.9356 -0.6548 2.2936 15 6 10.0971 0.0814 2.9643 16 8 11.3203 -0.2628 2.3105 17 6 12.4569 0.3101 2.7867 18 6 12.3954 1.1898 3.8578 19 6 13.5530 1.7661 4.3440 20 6 14.7706 1.4762 3.7563 21 6 16.0309 2.1114 4.2845 22 8 16.9314 1.0915 4.7215 23 14 15.6114 3.2252 5.7178 24 6 14.8337 0.6042 2.6851 25 6 13.6798 0.0207 2.1991 26 6 4.1317 -1.5402 3.0876 27 1 -0.3634 0.5970 0.8365 28 1 -0.3633 0.4259 -0.9352 29 1 -0.3634 -1.0229 0.0988 30 1 1.7610 -1.7369 1.6666 31 1 1.7609 -0.1169 2.4043 32 1 4.8668 1.0610 1.6756 33 1 3.6255 1.0367 3.0020 34 1 6.4752 -1.4418 1.8116 35 1 9.0965 -1.7303 2.3674 36 1 8.8803 -0.3669 1.2438 37 1 9.9364 1.1570 2.8909 38 1 10.1523 -0.2069 4.0141 39 1 11.4440 1.4205 4.3138 40 1 13.5063 2.4475 5.1805 41 1 16.5011 2.6972 3.4947 42 1 16.5783 0.5300 5.4251 43 1 14.9410 2.4444 6.7885 44 1 16.8461 3.8582 6.2474 45 1 15.7860 0.3791 2.2281 46 1 13.7297 -0.6607 1.3626 47 1 3.3811 -1.5036 3.8772 48 1 4.5187 -2.5450 2.9179 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534690_4549602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:49 Heat of formation + Delta-G solvation = -125.575617 kcal Electronic energy + Delta-G solvation = -29981.351964 eV Core-core repulsion = 25517.518458 eV Total energy + Delta-G solvation = -4463.833506 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -41.54726 -41.16554 -39.71249 -39.10369 -37.96920 -37.30531 -37.00168 -34.78709 -33.35701 -32.06673 -31.52708 -30.88447 -30.08304 -26.74007 -26.70229 -25.73742 -24.15997 -23.39512 -22.26811 -21.61700 -20.36587 -19.80857 -19.54776 -18.47372 -17.96115 -17.60101 -17.50087 -17.19932 -17.09785 -16.95202 -16.83313 -16.38943 -16.18780 -16.04222 -15.76618 -15.48098 -15.27778 -14.75095 -14.67422 -14.47091 -14.30949 -14.19331 -14.04147 -13.94120 -13.89807 -13.49351 -13.45958 -13.13494 -13.01381 -12.95758 -12.86618 -12.81936 -12.37194 -12.29651 -12.18923 -12.07064 -11.86281 -11.80038 -11.61857 -11.32779 -11.11246 -10.98642 -10.61132 -10.14351 -10.04642 -9.22872 -4.93534 -0.90054 0.27011 0.29825 1.31213 1.47114 1.58234 1.67601 1.91358 1.93394 2.45684 2.64379 2.75719 3.11785 3.38833 3.42410 3.45549 3.53371 3.64357 3.70471 3.76758 3.81894 3.87004 3.90229 4.00382 4.08596 4.10270 4.21033 4.24937 4.33105 4.40149 4.42894 4.52722 4.56689 4.65388 4.66723 4.75842 4.77501 4.82077 4.85142 4.96932 4.97428 4.99496 5.02610 5.15087 5.17294 5.27910 5.48101 5.54709 5.71268 6.30709 6.41859 6.48611 7.11610 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.646 4.646 2 S 2.407 3.593 3 O -0.988 6.988 4 O -0.992 6.992 5 C -0.584 4.584 6 C -0.113 4.113 7 H 0.101 0.899 8 C -0.160 4.160 9 C 0.108 3.892 10 H 0.092 0.908 11 N -0.703 5.703 12 C 0.522 3.478 13 O -0.580 6.580 14 C -0.134 4.134 15 C 0.073 3.927 16 O -0.321 6.321 17 C 0.123 3.877 18 C -0.210 4.210 19 C -0.079 4.079 20 C -0.159 4.159 21 C -0.074 4.074 22 O -0.548 6.548 23 Si 0.758 3.242 24 C -0.059 4.059 25 C -0.159 4.159 26 C -0.113 4.113 27 H 0.152 0.848 28 H 0.126 0.874 29 H 0.153 0.847 30 H 0.170 0.830 31 H 0.164 0.836 32 H 0.060 0.940 33 H 0.108 0.892 34 H 0.418 0.582 35 H 0.128 0.872 36 H 0.125 0.875 37 H 0.067 0.933 38 H 0.067 0.933 39 H 0.140 0.860 40 H 0.144 0.856 41 H 0.126 0.874 42 H 0.385 0.615 43 H -0.286 1.286 44 H -0.301 1.301 45 H 0.140 0.860 46 H 0.141 0.859 47 H 0.119 0.881 48 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.152 -3.833 1.057 9.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.798 4.798 2 S 2.596 3.404 3 O -0.985 6.985 4 O -0.989 6.989 5 C -0.715 4.715 6 C -0.132 4.132 7 H 0.119 0.881 8 C -0.198 4.198 9 C 0.002 3.998 10 H 0.110 0.890 11 N -0.355 5.355 12 C 0.310 3.690 13 O -0.459 6.459 14 C -0.174 4.174 15 C -0.002 4.002 16 O -0.235 6.235 17 C 0.077 3.923 18 C -0.228 4.228 19 C -0.097 4.097 20 C -0.160 4.160 21 C -0.183 4.183 22 O -0.356 6.356 23 Si 0.664 3.336 24 C -0.077 4.077 25 C -0.177 4.177 26 C -0.152 4.152 27 H 0.170 0.830 28 H 0.145 0.855 29 H 0.171 0.829 30 H 0.188 0.812 31 H 0.182 0.818 32 H 0.078 0.922 33 H 0.127 0.873 34 H 0.255 0.745 35 H 0.146 0.854 36 H 0.143 0.857 37 H 0.085 0.915 38 H 0.085 0.915 39 H 0.158 0.842 40 H 0.161 0.839 41 H 0.144 0.856 42 H 0.234 0.766 43 H -0.213 1.213 44 H -0.229 1.229 45 H 0.158 0.842 46 H 0.159 0.841 47 H 0.138 0.862 48 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -7.123 -2.680 1.240 7.711 hybrid contribution -0.291 -1.321 0.532 1.454 sum -7.414 -4.001 1.773 8.609 Atomic orbital electron populations 1.30159 1.22909 1.13776 1.12969 1.07815 0.79622 0.74505 0.78469 1.93558 1.80684 1.36776 1.87504 1.93548 1.80871 1.67631 1.56853 1.30174 1.03985 1.16231 1.21112 1.22413 0.92038 0.98503 1.00246 0.88072 1.23714 0.99530 0.96573 1.00018 1.21920 0.83173 0.97602 0.97094 0.88959 1.45603 1.05523 1.48039 1.36323 1.20640 0.85946 0.79509 0.82940 1.90733 1.87747 1.36823 1.30645 1.21452 0.89036 1.04533 1.02367 1.22452 0.81185 1.00080 0.96528 1.85958 1.13987 1.66317 1.57280 1.19197 0.86617 0.93083 0.93374 1.21417 1.00421 1.01573 0.99406 1.20995 0.91492 0.98164 0.99043 1.20263 0.95152 1.01645 0.98891 1.25099 0.90037 0.95158 1.08051 1.86558 1.43593 1.46972 1.58520 0.94143 0.80610 0.82761 0.76056 1.20975 0.98016 0.94155 0.94542 1.20672 0.89688 1.04297 1.03062 1.23313 0.96920 0.98195 0.96776 0.82952 0.85506 0.82862 0.81240 0.81838 0.92154 0.87323 0.74507 0.85351 0.85718 0.91519 0.91511 0.84239 0.83891 0.85612 0.76559 1.21303 1.22945 0.84173 0.84071 0.86227 0.88949 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.65 7.35 10.62 113.37 1.20 8.56 16 2 S 2.41 -10.08 5.35 -56.49 -0.30 -10.39 16 3 O -0.99 -5.37 18.10 -127.37 -2.30 -7.67 16 4 O -0.99 -4.93 18.10 -127.37 -2.30 -7.24 16 5 C -0.58 7.03 5.64 71.98 0.41 7.44 16 6 C -0.11 0.82 3.54 -10.27 -0.04 0.79 16 7 H 0.10 -0.66 8.13 -2.39 -0.02 -0.68 16 8 C -0.16 0.47 7.43 31.12 0.23 0.70 16 9 C 0.11 -0.38 4.32 45.51 0.20 -0.18 16 10 H 0.09 0.02 7.46 -2.39 -0.02 0.01 16 11 N -0.70 2.78 5.27 -440.04 -2.32 0.46 16 12 C 0.52 0.45 7.83 87.66 0.69 1.14 16 13 O -0.58 -5.53 15.58 -3.01 -0.05 -5.57 16 14 C -0.13 0.51 6.07 29.85 0.18 0.69 16 15 C 0.07 0.08 4.03 71.98 0.29 0.37 16 16 O -0.32 -1.22 10.14 -92.44 -0.94 -2.16 16 17 C 0.12 0.57 6.69 22.51 0.15 0.73 16 18 C -0.21 -0.69 9.04 22.37 0.20 -0.49 16 19 C -0.08 -0.13 8.66 22.26 0.19 0.06 16 20 C -0.16 -0.32 5.39 -19.85 -0.11 -0.42 16 21 C -0.07 -0.06 2.82 71.23 0.20 0.14 16 22 O -0.55 -2.00 12.77 -148.98 -1.90 -3.90 16 23 Si 0.76 -0.15 29.78 68.60 2.04 1.89 16 24 C -0.06 -0.15 9.60 22.25 0.21 0.06 16 25 C -0.16 -0.55 9.99 22.36 0.22 -0.33 16 26 C -0.11 1.09 7.39 31.12 0.23 1.32 16 27 H 0.15 -2.40 8.14 -2.39 -0.02 -2.42 16 28 H 0.13 -1.23 8.14 -2.39 -0.02 -1.25 16 29 H 0.15 -2.45 8.14 -2.39 -0.02 -2.47 16 30 H 0.17 -3.08 8.14 -2.39 -0.02 -3.10 16 31 H 0.16 -2.80 7.84 -2.39 -0.02 -2.82 16 32 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 33 H 0.11 -0.55 7.90 -2.39 -0.02 -0.57 16 34 H 0.42 -3.98 8.70 -92.71 -0.81 -4.79 16 35 H 0.13 -1.00 8.14 -2.39 -0.02 -1.02 16 36 H 0.12 -0.84 8.14 -2.39 -0.02 -0.86 16 37 H 0.07 0.16 7.61 -2.39 -0.02 0.14 16 38 H 0.07 0.14 7.63 -2.39 -0.02 0.12 16 39 H 0.14 0.21 6.30 -2.91 -0.02 0.20 16 40 H 0.14 -0.30 4.87 -2.91 -0.01 -0.31 16 41 H 0.13 -0.13 7.96 -2.39 -0.02 -0.15 16 42 H 0.39 -0.62 8.70 -74.06 -0.64 -1.26 16 43 H -0.29 -1.13 7.11 99.48 0.71 -0.42 16 44 H -0.30 -2.18 7.11 99.48 0.71 -1.47 16 45 H 0.14 0.09 8.06 -2.91 -0.02 0.06 16 46 H 0.14 0.15 8.06 -2.91 -0.02 0.12 16 47 H 0.12 -1.51 8.10 -2.38 -0.02 -1.53 16 48 H 0.09 -1.04 8.14 -2.39 -0.02 -1.06 16 Total: 0.00 -35.43 410.81 -4.03 -39.45 By element: Atomic # 1 Polarization: -25.03 SS G_CDS: -0.42 Total: -25.45 kcal Atomic # 6 Polarization: 16.11 SS G_CDS: 4.47 Total: 20.57 kcal Atomic # 7 Polarization: 2.78 SS G_CDS: -2.32 Total: 0.46 kcal Atomic # 8 Polarization: -19.05 SS G_CDS: -7.50 Total: -26.55 kcal Atomic # 14 Polarization: -0.15 SS G_CDS: 2.04 Total: 1.89 kcal Atomic # 16 Polarization: -10.08 SS G_CDS: -0.30 Total: -10.39 kcal Total: -35.43 -4.03 -39.45 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_4549602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -86.122 kcal (2) G-P(sol) polarization free energy of solvation -35.426 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.547 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.028 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.454 kcal (6) G-S(sol) free energy of system = (1) + (5) -125.576 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds