Wall clock time and date at job start Tue Mar 9 2021 12:53:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81399 * 1 3 3 O 1.42101 * 108.57908 * 2 1 4 4 O 1.42102 * 108.57695 * 228.97994 * 2 1 3 5 5 C 1.81394 * 101.92269 * 114.49181 * 2 1 3 6 6 C 1.52998 * 109.47135 * 179.97438 * 5 2 1 7 7 H 1.08992 * 112.84981 * 316.19532 * 6 5 2 8 8 C 1.53782 * 113.68815 * 87.46857 * 6 5 2 9 9 C 1.53783 * 87.07944 * 139.99130 * 8 6 5 10 10 H 1.09006 * 113.68561 * 220.00242 * 9 8 6 11 11 N 1.46505 * 113.61369 * 89.11790 * 9 8 6 12 12 C 1.34770 * 120.00152 * 107.50053 * 11 9 8 13 13 O 1.21281 * 120.00374 * 359.97438 * 12 11 9 14 14 C 1.50705 * 120.00050 * 179.97438 * 12 11 9 15 15 C 1.52996 * 109.46957 * 180.02562 * 14 12 11 16 16 C 1.53004 * 109.46845 * 179.97438 * 15 14 12 17 17 O 1.42902 * 109.47331 * 179.97438 * 16 15 14 18 18 C 1.35900 * 116.99943 * 180.02562 * 17 16 15 19 19 C 1.38707 * 120.05163 * 180.02562 * 18 17 16 20 20 C 1.38166 * 119.94172 * 179.97438 * 19 18 17 21 21 C 1.50701 * 119.97212 * 180.02562 * 20 19 18 22 22 O 1.42902 * 109.46980 * 299.99951 * 21 20 19 23 23 Si 1.86295 * 109.47294 * 180.02562 * 21 20 19 24 24 C 1.38244 * 120.05849 * 359.72378 * 20 19 18 25 25 C 1.38288 * 120.10735 * 0.54781 * 24 20 19 26 26 C 1.38126 * 120.05387 * 359.44975 * 25 24 20 27 27 C 1.53779 * 87.08159 * 334.56426 * 9 8 6 28 28 H 1.09004 * 109.47009 * 305.51134 * 1 2 3 29 29 H 1.09002 * 109.47200 * 65.50681 * 1 2 3 30 30 H 1.09000 * 109.47363 * 185.50954 * 1 2 3 31 31 H 1.09006 * 109.47341 * 59.99742 * 5 2 1 32 32 H 1.08995 * 109.47163 * 300.00051 * 5 2 1 33 33 H 1.08998 * 113.61566 * 25.43924 * 8 6 5 34 34 H 1.09001 * 113.61083 * 254.53525 * 8 6 5 35 35 H 0.97001 * 119.99264 * 287.49368 * 11 9 8 36 36 H 1.08997 * 109.46691 * 59.99902 * 14 12 11 37 37 H 1.09006 * 109.46862 * 300.00005 * 14 12 11 38 38 H 1.08997 * 109.47587 * 60.00344 * 15 14 12 39 39 H 1.08992 * 109.47208 * 299.99528 * 15 14 12 40 40 H 1.09002 * 109.47424 * 59.99753 * 16 15 14 41 41 H 1.08998 * 109.47079 * 300.00142 * 16 15 14 42 42 H 1.08007 * 120.02994 * 359.94447 * 19 18 17 43 43 H 1.08997 * 109.47272 * 59.99834 * 21 20 19 44 44 H 0.96705 * 114.00185 * 179.97438 * 22 21 20 45 45 H 1.48496 * 110.00198 * 59.99888 * 23 21 20 46 46 H 1.48508 * 110.00272 * 181.32082 * 23 21 20 47 47 H 1.07993 * 119.94966 * 180.29953 * 24 20 19 48 48 H 1.08002 * 119.97455 * 179.73146 * 25 24 20 49 49 H 1.08000 * 120.02655 * 180.29782 * 26 25 24 50 50 H 1.08996 * 113.61031 * 139.98525 * 27 9 8 51 51 H 1.08999 * 113.61079 * 270.88254 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2667 -0.8841 -1.0163 5 6 2.1887 -0.7358 1.6151 6 6 3.7054 -0.8197 1.7978 7 1 4.2199 -1.1778 0.9061 8 6 4.3267 0.4523 2.3985 9 6 5.2305 -0.4754 3.2277 10 1 5.3821 -0.1373 4.2528 11 7 6.4825 -0.8301 2.5546 12 6 7.6476 -0.2994 2.9754 13 8 7.6597 0.4721 3.9111 14 6 8.9356 -0.6648 2.2834 15 6 10.0997 0.0688 2.9522 16 6 11.4074 -0.3026 2.2500 17 8 12.4947 0.3831 2.8743 18 6 13.7360 0.1623 2.3670 19 6 14.8371 0.7949 2.9250 20 6 16.0981 0.5684 2.4078 21 6 17.2949 1.2549 3.0139 22 8 17.1311 2.6712 2.9174 23 14 18.8341 0.7446 2.0967 24 6 16.2637 -0.2923 1.3387 25 6 15.1668 -0.9199 0.7770 26 6 13.9041 -0.6968 1.2905 27 6 4.1316 -1.5419 3.0868 28 1 -0.3633 0.5970 0.8366 29 1 -0.3634 0.4261 -0.9352 30 1 -0.3634 -1.0229 0.0987 31 1 1.7610 -1.7371 1.6663 32 1 1.7611 -0.1173 2.4041 33 1 3.6304 1.0360 3.0006 34 1 4.8705 1.0572 1.6729 35 1 6.4727 -1.4470 1.8061 36 1 8.8786 -0.3761 1.2339 37 1 9.0946 -1.7407 2.3563 38 1 10.1566 -0.2202 4.0017 39 1 9.9409 1.1447 2.8797 40 1 11.3509 -0.0139 1.2004 41 1 11.5660 -1.3785 2.3229 42 1 14.7088 1.4644 3.7628 43 1 17.3849 0.9701 4.0621 44 1 17.8658 3.1784 3.2891 45 1 18.7236 1.1278 0.6663 46 1 20.0253 1.3900 2.7049 47 1 17.2507 -0.4718 0.9389 48 1 15.2981 -1.5885 -0.0609 49 1 13.0484 -1.1909 0.8546 50 1 4.5179 -2.5469 2.9169 51 1 3.3820 -1.5035 3.8772 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_4549616.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:59 Heat of formation + Delta-G solvation = -122.884567 kcal Electronic energy + Delta-G solvation = -31560.387373 eV Core-core repulsion = 26941.132940 eV Total energy + Delta-G solvation = -4619.254433 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.153 amu Computer time = 2.62 seconds Orbital eigenvalues (eV) -41.46445 -41.13973 -39.69642 -39.00937 -38.01817 -37.39418 -37.05482 -34.89986 -34.72896 -32.51535 -31.49471 -31.06690 -30.45498 -28.33908 -26.93338 -26.76661 -24.55944 -23.61350 -23.33243 -21.77251 -21.53886 -20.49346 -19.95574 -18.88510 -18.50579 -18.30045 -17.82147 -17.49464 -17.33339 -17.20258 -17.12271 -16.96363 -16.86297 -16.35436 -15.86531 -15.72835 -15.58055 -15.52528 -14.88399 -14.67659 -14.48339 -14.44297 -14.33056 -14.24301 -14.10411 -13.81836 -13.69448 -13.48178 -13.34429 -13.28503 -13.14897 -13.08910 -13.01522 -12.64116 -12.59114 -12.42857 -12.30852 -12.18816 -12.04166 -11.88685 -11.62471 -11.58479 -11.52855 -11.22140 -10.90348 -10.52411 -10.14706 -9.79917 -9.13649 -4.93607 -1.13164 0.30152 0.51444 1.29323 1.58273 1.62349 1.63578 1.85558 1.98628 2.33246 2.51993 2.72055 2.85478 3.17148 3.21007 3.36015 3.40425 3.51812 3.59414 3.69296 3.73181 3.78105 3.82004 3.87878 3.88411 3.93594 4.07714 4.10553 4.13830 4.20682 4.22891 4.28599 4.32288 4.33177 4.42779 4.50879 4.54241 4.55011 4.60011 4.69200 4.72374 4.77438 4.90986 4.95523 4.98357 5.06562 5.18605 5.35759 5.45729 5.46984 5.55769 5.77452 6.38358 6.46341 6.49448 7.16742 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.417 3.583 3 O -0.933 6.933 4 O -0.940 6.940 5 C -0.602 4.602 6 C -0.107 4.107 7 H 0.104 0.896 8 C -0.152 4.152 9 C 0.118 3.882 10 H 0.109 0.891 11 N -0.717 5.717 12 C 0.518 3.482 13 O -0.531 6.531 14 C -0.138 4.138 15 C -0.105 4.105 16 C 0.059 3.941 17 O -0.312 6.312 18 C 0.132 3.868 19 C -0.125 4.125 20 C -0.035 4.035 21 C -0.078 4.078 22 O -0.535 6.535 23 Si 0.686 3.314 24 C -0.154 4.154 25 C -0.073 4.073 26 C -0.206 4.206 27 C -0.130 4.130 28 H 0.129 0.871 29 H 0.130 0.870 30 H 0.128 0.872 31 H 0.136 0.864 32 H 0.136 0.864 33 H 0.100 0.900 34 H 0.083 0.917 35 H 0.402 0.598 36 H 0.100 0.900 37 H 0.099 0.901 38 H 0.084 0.916 39 H 0.084 0.916 40 H 0.064 0.936 41 H 0.065 0.935 42 H 0.133 0.867 43 H 0.079 0.921 44 H 0.380 0.620 45 H -0.255 1.255 46 H -0.261 1.261 47 H 0.129 0.871 48 H 0.131 0.869 49 H 0.130 0.870 50 H 0.080 0.920 51 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.139 -7.187 0.530 7.860 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.599 3.401 3 O -0.931 6.931 4 O -0.937 6.937 5 C -0.731 4.731 6 C -0.126 4.126 7 H 0.122 0.878 8 C -0.190 4.190 9 C 0.013 3.987 10 H 0.127 0.873 11 N -0.369 5.369 12 C 0.304 3.696 13 O -0.406 6.406 14 C -0.178 4.178 15 C -0.143 4.143 16 C -0.016 4.016 17 O -0.225 6.225 18 C 0.087 3.913 19 C -0.143 4.143 20 C -0.035 4.035 21 C -0.188 4.188 22 O -0.342 6.342 23 Si 0.587 3.413 24 C -0.171 4.171 25 C -0.091 4.091 26 C -0.224 4.224 27 C -0.169 4.169 28 H 0.147 0.853 29 H 0.149 0.851 30 H 0.147 0.853 31 H 0.154 0.846 32 H 0.154 0.846 33 H 0.118 0.882 34 H 0.101 0.899 35 H 0.237 0.763 36 H 0.118 0.882 37 H 0.118 0.882 38 H 0.102 0.898 39 H 0.102 0.898 40 H 0.082 0.918 41 H 0.083 0.917 42 H 0.151 0.849 43 H 0.097 0.903 44 H 0.228 0.772 45 H -0.179 1.179 46 H -0.187 1.187 47 H 0.146 0.854 48 H 0.149 0.851 49 H 0.148 0.852 50 H 0.099 0.901 51 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -2.504 -6.107 -0.046 6.601 hybrid contribution -0.936 0.355 0.413 1.083 sum -3.440 -5.752 0.367 6.712 Atomic orbital electron populations 1.30298 1.26802 1.11629 1.12058 1.07976 0.78364 0.76006 0.77786 1.93626 1.78838 1.34199 1.86401 1.93616 1.79088 1.67113 1.53879 1.30312 1.05036 1.14171 1.23536 1.22367 0.90712 0.99601 0.99917 0.87759 1.23647 0.99167 0.95986 1.00221 1.21816 0.82872 0.96037 0.98015 0.87289 1.45711 1.06092 1.48816 1.36298 1.20604 0.85069 0.80177 0.83708 1.90756 1.86980 1.34472 1.28431 1.21540 0.92058 1.02854 1.01380 1.21229 0.89866 1.02358 1.00868 1.22821 0.85298 0.96463 0.96995 1.86079 1.13152 1.66520 1.56767 1.18983 0.84768 0.94708 0.92875 1.20238 0.89592 1.01924 1.02588 1.19021 0.93145 0.96015 0.95297 1.24852 1.05084 0.83831 1.04996 1.86602 1.47372 1.15819 1.84401 0.95002 0.74698 0.91788 0.79803 1.20842 0.98965 1.00029 0.97312 1.20879 0.91472 0.98061 0.98699 1.21302 0.98982 1.02948 0.99197 1.23341 0.97922 0.98598 0.97041 0.85256 0.85098 0.85310 0.84557 0.84604 0.88174 0.89853 0.76286 0.88210 0.88241 0.89779 0.89765 0.91760 0.91710 0.84947 0.90337 0.77176 1.17936 1.18654 0.85395 0.85113 0.85216 0.90120 0.88008 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 34. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.09 10.62 101.05 1.07 4.16 16 2 S 2.42 -4.86 5.35 -107.50 -0.57 -5.44 16 3 O -0.93 -2.00 18.10 -57.83 -1.05 -3.04 16 4 O -0.94 -1.88 18.10 -57.83 -1.05 -2.93 16 5 C -0.60 2.85 5.64 37.16 0.21 3.06 16 6 C -0.11 0.31 3.53 -89.81 -0.32 -0.01 16 7 H 0.10 -0.32 8.13 -51.93 -0.42 -0.74 16 8 C -0.15 0.19 7.43 -25.92 -0.19 -0.01 16 9 C 0.12 -0.15 4.32 -67.12 -0.29 -0.44 16 10 H 0.11 0.04 7.47 -51.93 -0.39 -0.35 16 11 N -0.72 1.21 5.26 -53.01 -0.28 0.93 16 12 C 0.52 0.32 7.83 -10.99 -0.09 0.23 16 13 O -0.53 -2.73 15.58 5.56 0.09 -2.65 16 14 C -0.14 0.34 5.70 -27.88 -0.16 0.18 16 15 C -0.11 0.00 4.87 -26.73 -0.13 -0.13 16 16 C 0.06 -0.03 4.74 37.16 0.18 0.15 16 17 O -0.31 -0.97 10.14 -19.42 -0.20 -1.16 16 18 C 0.13 0.40 6.69 -39.22 -0.26 0.14 16 19 C -0.12 -0.43 9.55 -39.43 -0.38 -0.81 16 20 C -0.03 -0.08 5.42 -104.65 -0.57 -0.65 16 21 C -0.08 -0.07 2.81 36.01 0.10 0.04 16 22 O -0.53 -1.17 12.74 -35.23 -0.45 -1.62 16 23 Si 0.69 -0.27 29.79 -169.99 -5.06 -5.34 16 24 C -0.15 -0.18 8.67 -39.56 -0.34 -0.52 16 25 C -0.07 -0.04 10.04 -39.60 -0.40 -0.44 16 26 C -0.21 -0.23 9.04 -39.43 -0.36 -0.59 16 27 C -0.13 0.46 7.39 -25.92 -0.19 0.27 16 28 H 0.13 -0.82 8.14 -51.92 -0.42 -1.24 16 29 H 0.13 -0.57 8.14 -51.92 -0.42 -0.99 16 30 H 0.13 -0.82 8.14 -51.92 -0.42 -1.25 16 31 H 0.14 -0.95 8.14 -51.92 -0.42 -1.37 16 32 H 0.14 -0.91 7.85 -51.93 -0.41 -1.31 16 33 H 0.10 -0.21 7.90 -51.93 -0.41 -0.62 16 34 H 0.08 0.03 8.14 -51.93 -0.42 -0.40 16 35 H 0.40 -1.77 8.70 -40.82 -0.36 -2.12 16 36 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 37 H 0.10 -0.46 8.14 -51.93 -0.42 -0.88 16 38 H 0.08 0.11 8.10 -51.93 -0.42 -0.31 16 39 H 0.08 0.15 8.10 -51.93 -0.42 -0.27 16 40 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 41 H 0.06 -0.13 7.66 -51.93 -0.40 -0.53 16 42 H 0.13 0.47 8.06 -52.48 -0.42 0.04 16 43 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 44 H 0.38 -0.76 8.74 45.56 0.40 -0.36 16 45 H -0.25 -0.70 7.11 56.52 0.40 -0.30 16 46 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 47 H 0.13 -0.10 4.87 -52.49 -0.26 -0.36 16 48 H 0.13 -0.25 8.06 -52.49 -0.42 -0.68 16 49 H 0.13 -0.15 6.30 -52.49 -0.33 -0.48 16 50 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 51 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 LS Contribution 432.36 15.07 6.52 6.52 Total: 0.00 -15.82 432.36 -12.23 -28.05 By element: Atomic # 1 Polarization: -9.89 SS G_CDS: -8.07 Total: -17.96 kcal Atomic # 6 Polarization: 6.74 SS G_CDS: -2.11 Total: 4.63 kcal Atomic # 7 Polarization: 1.21 SS G_CDS: -0.28 Total: 0.93 kcal Atomic # 8 Polarization: -8.74 SS G_CDS: -2.65 Total: -11.40 kcal Atomic # 14 Polarization: -0.27 SS G_CDS: -5.06 Total: -5.34 kcal Atomic # 16 Polarization: -4.86 SS G_CDS: -0.57 Total: -5.44 kcal Total LS contribution 6.52 Total: 6.52 kcal Total: -15.82 -12.23 -28.05 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_4549616.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -94.835 kcal (2) G-P(sol) polarization free energy of solvation -15.820 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.655 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.230 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.050 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.885 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.63 seconds