Wall clock time and date at job start Tue Mar 9 2021 12:54:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35982 * 117.00205 * 2 1 4 4 C 1.38672 * 120.00532 * 180.02562 * 3 2 1 5 5 C 1.38153 * 120.00095 * 179.97438 * 4 3 2 6 6 C 1.50702 * 119.99834 * 180.26824 * 5 4 3 7 7 O 1.42899 * 109.47599 * 254.72868 * 6 5 4 8 8 Si 1.86301 * 109.46986 * 14.72998 * 6 5 4 9 9 C 1.38675 * 120.00122 * 359.97438 * 5 4 3 10 10 O 1.35982 * 119.99685 * 179.97438 * 9 5 4 11 11 C 1.42903 * 116.99790 * 180.02562 * 10 9 5 12 12 C 1.50693 * 109.47364 * 179.97438 * 11 10 9 13 13 O 1.21279 * 119.99968 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00342 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00138 * 180.02562 * 14 12 11 16 16 H 1.08992 * 112.84996 * 23.80695 * 15 14 12 17 17 C 1.53785 * 113.61346 * 155.00046 * 15 14 12 18 18 C 1.53784 * 87.08060 * 89.11380 * 17 15 14 19 19 H 1.08999 * 113.61460 * 270.80202 * 18 17 15 20 20 C 1.52998 * 113.61173 * 139.97722 * 18 17 15 21 21 S 1.81411 * 109.46985 * 174.99878 * 20 18 17 22 22 C 1.81398 * 101.92261 * 180.02562 * 21 20 18 23 23 O 1.42094 * 108.57785 * 294.49355 * 21 20 18 24 24 O 1.42102 * 108.57325 * 65.51662 * 21 20 18 25 25 C 1.53781 * 87.08001 * 25.43363 * 18 17 15 26 26 C 1.38718 * 119.99697 * 359.97438 * 9 5 4 27 27 C 1.38104 * 120.00400 * 0.02562 * 26 9 5 28 28 H 1.08999 * 109.47048 * 300.00189 * 1 2 3 29 29 H 1.09003 * 109.46867 * 60.00334 * 1 2 3 30 30 H 1.09001 * 109.46909 * 179.97438 * 1 2 3 31 31 H 1.08001 * 120.00076 * 0.02562 * 4 3 2 32 32 H 1.09002 * 109.47096 * 134.72307 * 6 5 4 33 33 H 0.96701 * 113.99640 * 299.99941 * 7 6 5 34 34 H 1.48498 * 110.00105 * 59.99734 * 8 6 5 35 35 H 1.48507 * 109.99708 * 181.31651 * 8 6 5 36 36 H 1.09003 * 109.46927 * 300.00190 * 11 10 9 37 37 H 1.08997 * 109.47609 * 59.99732 * 11 10 9 38 38 H 0.97006 * 119.99876 * 0.02562 * 14 12 11 39 39 H 1.08998 * 113.61085 * 203.65998 * 17 15 14 40 40 H 1.09006 * 113.61167 * 334.56795 * 17 15 14 41 41 H 1.08993 * 109.47942 * 294.99961 * 20 18 17 42 42 H 1.08996 * 109.47179 * 55.00559 * 20 18 17 43 43 H 1.08999 * 109.47099 * 59.99839 * 22 21 20 44 44 H 1.08989 * 109.47401 * 180.02562 * 22 21 20 45 45 H 1.09003 * 109.46939 * 300.00424 * 22 21 20 46 46 H 1.09004 * 113.61425 * 220.02172 * 25 18 17 47 47 H 1.09000 * 113.61950 * 89.11428 * 25 18 17 48 48 H 1.08002 * 119.99516 * 180.02562 * 26 9 5 49 49 H 1.07999 * 120.00165 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0583 2.5152 -0.0011 6 6 5.5633 2.5941 -0.0078 7 8 6.0264 2.9710 1.2905 8 14 6.2703 0.9310 -0.4607 9 6 3.3030 3.6782 -0.0016 10 8 3.9204 4.8898 -0.0016 11 6 3.0805 6.0459 -0.0016 12 6 3.9346 7.2874 -0.0010 13 8 5.1436 7.1917 -0.0010 14 7 3.3550 8.5042 -0.0014 15 6 4.1854 9.7112 -0.0013 16 1 5.1824 9.5389 -0.4064 17 6 3.4826 10.9424 -0.5973 18 6 2.9638 11.2348 0.8206 19 1 2.0114 10.7544 1.0447 20 6 2.9803 12.7206 1.1849 21 16 2.2131 12.9527 2.8124 22 6 2.3395 14.7487 3.0335 23 8 0.8388 12.6041 2.7189 24 8 3.0252 12.3174 3.7902 25 6 4.1849 10.4591 1.3423 26 6 1.9178 3.6055 -0.0021 27 6 1.2908 2.3750 -0.0016 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 4.0195 0.3785 -0.0014 32 1 5.8849 3.3367 -0.7380 33 1 5.6971 3.8288 1.5918 34 1 5.7962 0.5277 -1.8090 35 1 7.7541 0.9873 -0.4399 36 1 2.4512 6.0378 -0.8916 37 1 2.4511 6.0379 0.8883 38 1 2.3879 8.5808 -0.0017 39 1 4.1714 11.6982 -0.9746 40 1 2.6944 10.6938 -1.3080 41 1 4.0102 13.0762 1.2147 42 1 2.4229 13.2843 0.4369 43 1 1.8008 15.2524 2.2310 44 1 1.9061 15.0280 3.9937 45 1 3.3883 15.0449 3.0088 46 1 3.9637 9.8204 2.1975 47 1 5.0657 11.0827 1.4952 48 1 1.3296 4.5113 -0.0030 49 1 0.2123 2.3185 -0.0016 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:49 Heat of formation + Delta-G solvation = -144.274229 kcal Electronic energy + Delta-G solvation = -33303.878840 eV Core-core repulsion = 28520.552309 eV Total energy + Delta-G solvation = -4783.326531 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.137 amu Computer time = 3.50 seconds Orbital eigenvalues (eV) -41.88745 -41.38736 -40.24125 -39.36876 -38.04961 -37.94966 -37.08561 -36.81536 -34.91008 -32.77511 -31.70550 -30.96489 -30.51418 -29.25769 -28.06258 -26.99600 -26.47611 -24.63340 -23.62585 -22.39188 -22.00823 -20.61195 -19.99147 -19.52491 -18.82592 -18.55032 -17.95645 -17.83799 -17.57810 -17.51195 -17.25609 -17.11849 -16.97065 -16.68402 -16.02064 -15.99305 -15.87712 -15.52073 -15.31447 -15.25821 -15.09082 -14.51250 -14.39527 -14.34627 -14.28441 -14.12437 -13.98001 -13.73751 -13.61690 -13.46232 -13.24508 -13.14128 -13.07089 -13.04765 -12.72371 -12.60193 -12.36919 -12.23834 -12.07873 -11.85219 -11.59514 -11.51044 -11.27757 -11.14542 -11.01961 -10.92033 -10.28949 -10.05659 -8.80838 -4.72905 -1.16164 0.09082 0.36243 1.31795 1.37559 1.55155 1.60553 1.80119 2.15679 2.26724 2.44902 2.49306 2.57704 2.82205 3.10619 3.15828 3.32568 3.36846 3.50541 3.55874 3.65778 3.66968 3.68676 3.73953 3.82683 3.84188 3.97675 4.03265 4.09734 4.12923 4.13849 4.18258 4.19076 4.35304 4.44632 4.44741 4.48966 4.52813 4.54973 4.60320 4.66430 4.69916 4.83803 4.87518 5.04100 5.12240 5.20040 5.33039 5.41979 6.05883 6.23528 6.39566 6.76513 6.98513 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.314 6.314 3 C 0.104 3.896 4 C -0.103 4.103 5 C -0.098 4.098 6 C -0.072 4.072 7 O -0.533 6.533 8 Si 0.743 3.257 9 C 0.099 3.901 10 O -0.290 6.290 11 C 0.041 3.959 12 C 0.520 3.480 13 O -0.508 6.508 14 N -0.712 5.712 15 C 0.121 3.879 16 H 0.111 0.889 17 C -0.129 4.129 18 C -0.107 4.107 19 H 0.105 0.895 20 C -0.602 4.602 21 S 2.417 3.583 22 C -0.658 4.658 23 O -0.940 6.940 24 O -0.933 6.933 25 C -0.151 4.151 26 C -0.165 4.165 27 C -0.165 4.165 28 H 0.056 0.944 29 H 0.055 0.945 30 H 0.103 0.897 31 H 0.146 0.854 32 H 0.078 0.922 33 H 0.369 0.631 34 H -0.251 1.251 35 H -0.254 1.254 36 H 0.094 0.906 37 H 0.096 0.904 38 H 0.403 0.597 39 H 0.103 0.897 40 H 0.081 0.919 41 H 0.136 0.864 42 H 0.136 0.864 43 H 0.128 0.872 44 H 0.131 0.869 45 H 0.129 0.871 46 H 0.084 0.916 47 H 0.102 0.898 48 H 0.133 0.867 49 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.985 4.800 -2.584 8.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.227 6.227 3 C 0.058 3.942 4 C -0.121 4.121 5 C -0.099 4.099 6 C -0.180 4.180 7 O -0.339 6.339 8 Si 0.642 3.358 9 C 0.054 3.946 10 O -0.203 6.203 11 C -0.038 4.038 12 C 0.304 3.696 13 O -0.381 6.381 14 N -0.366 5.366 15 C 0.015 3.985 16 H 0.129 0.871 17 C -0.168 4.168 18 C -0.126 4.126 19 H 0.123 0.877 20 C -0.731 4.731 21 S 2.599 3.401 22 C -0.808 4.808 23 O -0.937 6.937 24 O -0.930 6.930 25 C -0.190 4.190 26 C -0.184 4.184 27 C -0.184 4.184 28 H 0.075 0.925 29 H 0.074 0.926 30 H 0.121 0.879 31 H 0.164 0.836 32 H 0.096 0.904 33 H 0.217 0.783 34 H -0.175 1.175 35 H -0.179 1.179 36 H 0.112 0.888 37 H 0.114 0.886 38 H 0.238 0.762 39 H 0.122 0.878 40 H 0.100 0.900 41 H 0.154 0.846 42 H 0.155 0.845 43 H 0.147 0.853 44 H 0.149 0.851 45 H 0.148 0.852 46 H 0.103 0.897 47 H 0.120 0.880 48 H 0.151 0.849 49 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -4.358 2.938 -2.607 5.867 hybrid contribution -1.293 2.952 -0.860 3.335 sum -5.651 5.889 -3.467 8.867 Atomic orbital electron populations 1.23103 0.78060 1.04397 1.01329 1.86113 1.21547 1.26179 1.88877 1.18812 0.91909 0.84574 0.98855 1.20055 0.91640 0.96766 1.03647 1.19482 0.96615 0.90023 1.03807 1.25372 0.91427 1.12344 0.88902 1.86706 1.73584 1.41828 1.31751 0.93005 0.79741 0.80243 0.82824 1.18652 0.90829 0.84548 1.00545 1.86108 1.33856 1.11067 1.89299 1.22442 0.93135 0.84058 1.04166 1.20027 0.88855 0.84090 0.76599 1.90795 1.14105 1.86442 1.46749 1.45488 1.10266 1.04659 1.76204 1.21836 0.96240 0.83254 0.97134 0.87093 1.23352 1.00817 0.97199 0.95459 1.22378 1.00274 0.90983 0.98994 0.87715 1.30316 1.14597 1.04885 1.23295 1.07970 0.75988 0.78299 0.77855 1.30293 1.11792 1.26471 1.12213 1.93614 1.31830 1.81744 1.86529 1.93628 1.70409 1.72573 1.56425 1.23657 0.97949 0.99075 0.98293 1.21020 0.92819 0.98716 1.05810 1.21084 1.00340 0.91502 1.05446 0.92518 0.92632 0.87862 0.83637 0.90430 0.78341 1.17547 1.17913 0.88770 0.88599 0.76183 0.87829 0.90049 0.84561 0.84532 0.85309 0.85079 0.85243 0.89733 0.87984 0.84896 0.84685 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 49. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.31 -0.46 10.50 -19.68 -0.21 -0.66 16 3 C 0.10 0.18 6.69 -39.24 -0.26 -0.09 16 4 C -0.10 -0.21 8.59 -39.45 -0.34 -0.55 16 5 C -0.10 -0.26 5.28 -104.49 -0.55 -0.81 16 6 C -0.07 -0.23 2.33 36.01 0.08 -0.15 16 7 O -0.53 -2.21 12.65 -35.23 -0.45 -2.66 16 8 Si 0.74 1.46 30.17 -169.99 -5.13 -3.67 16 9 C 0.10 0.19 6.62 -39.24 -0.26 -0.07 16 10 O -0.29 -0.63 8.55 -39.60 -0.34 -0.97 16 11 C 0.04 -0.06 5.22 36.00 0.19 0.13 16 12 C 0.52 0.39 7.91 -10.99 -0.09 0.30 16 13 O -0.51 -2.82 16.10 -14.35 -0.23 -3.05 16 14 N -0.71 1.58 5.26 -53.02 -0.28 1.30 16 15 C 0.12 -0.22 4.32 -67.12 -0.29 -0.51 16 16 H 0.11 -0.02 7.46 -51.93 -0.39 -0.40 16 17 C -0.13 0.53 7.39 -25.91 -0.19 0.34 16 18 C -0.11 0.37 3.53 -89.81 -0.32 0.05 16 19 H 0.10 -0.39 8.13 -51.93 -0.42 -0.81 16 20 C -0.60 3.12 5.64 37.16 0.21 3.33 16 21 S 2.42 -5.75 5.35 -107.50 -0.58 -6.32 16 22 C -0.66 3.26 10.62 101.05 1.07 4.33 16 23 O -0.94 -1.54 18.10 -57.83 -1.05 -2.59 16 24 O -0.93 -1.67 18.10 -57.83 -1.05 -2.71 16 25 C -0.15 0.27 7.43 -25.92 -0.19 0.08 16 26 C -0.16 0.00 9.03 -39.45 -0.36 -0.35 16 27 C -0.16 -0.03 9.03 -39.45 -0.36 -0.38 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.56 16 29 H 0.06 -0.16 7.66 -51.93 -0.40 -0.56 16 30 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 31 H 0.15 0.06 5.12 -52.49 -0.27 -0.21 16 32 H 0.08 0.31 7.83 -51.93 -0.41 -0.10 16 33 H 0.37 1.04 8.58 45.56 0.39 1.43 16 34 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 35 H -0.25 -1.19 7.11 56.52 0.40 -0.78 16 36 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 37 H 0.10 -0.36 7.66 -51.93 -0.40 -0.76 16 38 H 0.40 -2.10 8.70 -40.82 -0.36 -2.46 16 39 H 0.10 -0.52 8.10 -51.93 -0.42 -0.94 16 40 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 41 H 0.14 -0.97 7.84 -51.93 -0.41 -1.37 16 42 H 0.14 -1.01 8.14 -51.93 -0.42 -1.43 16 43 H 0.13 -0.86 8.14 -51.92 -0.42 -1.28 16 44 H 0.13 -0.60 8.14 -51.93 -0.42 -1.02 16 45 H 0.13 -0.85 8.14 -51.92 -0.42 -1.27 16 46 H 0.08 -0.03 8.14 -51.93 -0.42 -0.45 16 47 H 0.10 -0.27 7.90 -51.93 -0.41 -0.68 16 48 H 0.13 -0.39 6.29 -52.49 -0.33 -0.72 16 49 H 0.14 -0.29 6.29 -52.49 -0.33 -0.62 16 LS Contribution 418.31 15.07 6.30 6.30 Total: 0.00 -15.41 418.31 -10.75 -26.15 By element: Atomic # 1 Polarization: -10.62 SS G_CDS: -7.09 Total: -17.71 kcal Atomic # 6 Polarization: 7.25 SS G_CDS: -0.66 Total: 6.59 kcal Atomic # 7 Polarization: 1.58 SS G_CDS: -0.28 Total: 1.30 kcal Atomic # 8 Polarization: -9.33 SS G_CDS: -3.32 Total: -12.64 kcal Atomic # 14 Polarization: 1.46 SS G_CDS: -5.13 Total: -3.67 kcal Atomic # 16 Polarization: -5.75 SS G_CDS: -0.58 Total: -6.32 kcal Total LS contribution 6.30 Total: 6.30 kcal Total: -15.41 -10.75 -26.15 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -118.122 kcal (2) G-P(sol) polarization free energy of solvation -15.407 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -133.529 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.746 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.152 kcal (6) G-S(sol) free energy of system = (1) + (5) -144.274 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.50 seconds