Wall clock time and date at job start Tue Mar 9 2021 12:54:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35982 * 117.00205 * 2 1 4 4 C 1.38672 * 120.00532 * 180.02562 * 3 2 1 5 5 C 1.38153 * 120.00095 * 179.97438 * 4 3 2 6 6 C 1.50702 * 119.99834 * 180.26824 * 5 4 3 7 7 O 1.42899 * 109.47599 * 254.72868 * 6 5 4 8 8 Si 1.86301 * 109.46986 * 14.72998 * 6 5 4 9 9 C 1.38675 * 120.00122 * 359.97438 * 5 4 3 10 10 O 1.35982 * 119.99685 * 179.97438 * 9 5 4 11 11 C 1.42903 * 116.99790 * 180.02562 * 10 9 5 12 12 C 1.50693 * 109.47364 * 179.97438 * 11 10 9 13 13 O 1.21279 * 119.99968 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00342 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00138 * 180.02562 * 14 12 11 16 16 H 1.08992 * 112.84996 * 23.80695 * 15 14 12 17 17 C 1.53785 * 113.61346 * 155.00046 * 15 14 12 18 18 C 1.53784 * 87.08060 * 89.11380 * 17 15 14 19 19 H 1.08999 * 113.61460 * 270.80202 * 18 17 15 20 20 C 1.52998 * 113.61173 * 139.97722 * 18 17 15 21 21 S 1.81411 * 109.46985 * 174.99878 * 20 18 17 22 22 C 1.81398 * 101.92261 * 180.02562 * 21 20 18 23 23 O 1.42094 * 108.57785 * 294.49355 * 21 20 18 24 24 O 1.42102 * 108.57325 * 65.51662 * 21 20 18 25 25 C 1.53781 * 87.08001 * 25.43363 * 18 17 15 26 26 C 1.38718 * 119.99697 * 359.97438 * 9 5 4 27 27 C 1.38104 * 120.00400 * 0.02562 * 26 9 5 28 28 H 1.08999 * 109.47048 * 300.00189 * 1 2 3 29 29 H 1.09003 * 109.46867 * 60.00334 * 1 2 3 30 30 H 1.09001 * 109.46909 * 179.97438 * 1 2 3 31 31 H 1.08001 * 120.00076 * 0.02562 * 4 3 2 32 32 H 1.09002 * 109.47096 * 134.72307 * 6 5 4 33 33 H 0.96701 * 113.99640 * 299.99941 * 7 6 5 34 34 H 1.48498 * 110.00105 * 59.99734 * 8 6 5 35 35 H 1.48507 * 109.99708 * 181.31651 * 8 6 5 36 36 H 1.09003 * 109.46927 * 300.00190 * 11 10 9 37 37 H 1.08997 * 109.47609 * 59.99732 * 11 10 9 38 38 H 0.97006 * 119.99876 * 0.02562 * 14 12 11 39 39 H 1.08998 * 113.61085 * 203.65998 * 17 15 14 40 40 H 1.09006 * 113.61167 * 334.56795 * 17 15 14 41 41 H 1.08993 * 109.47942 * 294.99961 * 20 18 17 42 42 H 1.08996 * 109.47179 * 55.00559 * 20 18 17 43 43 H 1.08999 * 109.47099 * 59.99839 * 22 21 20 44 44 H 1.08989 * 109.47401 * 180.02562 * 22 21 20 45 45 H 1.09003 * 109.46939 * 300.00424 * 22 21 20 46 46 H 1.09004 * 113.61425 * 220.02172 * 25 18 17 47 47 H 1.09000 * 113.61950 * 89.11428 * 25 18 17 48 48 H 1.08002 * 119.99516 * 180.02562 * 26 9 5 49 49 H 1.07999 * 120.00165 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0583 2.5152 -0.0011 6 6 5.5633 2.5941 -0.0078 7 8 6.0264 2.9710 1.2905 8 14 6.2703 0.9310 -0.4607 9 6 3.3030 3.6782 -0.0016 10 8 3.9204 4.8898 -0.0016 11 6 3.0805 6.0459 -0.0016 12 6 3.9346 7.2874 -0.0010 13 8 5.1436 7.1917 -0.0010 14 7 3.3550 8.5042 -0.0014 15 6 4.1854 9.7112 -0.0013 16 1 5.1824 9.5389 -0.4064 17 6 3.4826 10.9424 -0.5973 18 6 2.9638 11.2348 0.8206 19 1 2.0114 10.7544 1.0447 20 6 2.9803 12.7206 1.1849 21 16 2.2131 12.9527 2.8124 22 6 2.3395 14.7487 3.0335 23 8 0.8388 12.6041 2.7189 24 8 3.0252 12.3174 3.7902 25 6 4.1849 10.4591 1.3423 26 6 1.9178 3.6055 -0.0021 27 6 1.2908 2.3750 -0.0016 28 1 -0.3633 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0277 -0.0005 31 1 4.0195 0.3785 -0.0014 32 1 5.8849 3.3367 -0.7380 33 1 5.6971 3.8288 1.5918 34 1 5.7962 0.5277 -1.8090 35 1 7.7541 0.9873 -0.4399 36 1 2.4512 6.0378 -0.8916 37 1 2.4511 6.0379 0.8883 38 1 2.3879 8.5808 -0.0017 39 1 4.1714 11.6982 -0.9746 40 1 2.6944 10.6938 -1.3080 41 1 4.0102 13.0762 1.2147 42 1 2.4229 13.2843 0.4369 43 1 1.8008 15.2524 2.2310 44 1 1.9061 15.0280 3.9937 45 1 3.3883 15.0449 3.0088 46 1 3.9637 9.8204 2.1975 47 1 5.0657 11.0827 1.4952 48 1 1.3296 4.5113 -0.0030 49 1 0.2123 2.3185 -0.0016 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534690_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:48 Heat of formation + Delta-G solvation = -153.655355 kcal Electronic energy + Delta-G solvation = -33304.285636 eV Core-core repulsion = 28520.552309 eV Total energy + Delta-G solvation = -4783.733327 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.137 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -41.89360 -41.32383 -40.19168 -39.37219 -38.10200 -37.97594 -37.01063 -36.94388 -34.87630 -32.83590 -31.51858 -30.83636 -30.21620 -29.14490 -27.95432 -26.76206 -26.60482 -24.49348 -23.57149 -22.43308 -21.98425 -20.44405 -19.81124 -19.54968 -18.84199 -18.53101 -18.08365 -17.70656 -17.53631 -17.48999 -17.10574 -16.96976 -16.85560 -16.61922 -16.12597 -15.87837 -15.80570 -15.49731 -15.41376 -15.21188 -15.00841 -14.50504 -14.21115 -14.13283 -14.11396 -14.01073 -13.92071 -13.57411 -13.52539 -13.43006 -13.14375 -13.05623 -13.01932 -12.93420 -12.55049 -12.39987 -12.31240 -12.21007 -12.03884 -11.87503 -11.46497 -11.35545 -11.32263 -11.25862 -11.07592 -11.00012 -10.22292 -10.11287 -8.83993 -4.94126 -0.90790 0.04918 0.31607 1.32548 1.35497 1.39667 1.57195 1.90522 1.90551 2.33612 2.51570 2.54390 2.74742 3.11007 3.35643 3.42363 3.43275 3.52384 3.63192 3.70982 3.74764 3.84113 3.91222 4.03573 4.07661 4.07839 4.09258 4.11327 4.19781 4.19944 4.26369 4.38497 4.44175 4.44663 4.49782 4.68406 4.73150 4.78538 4.79227 4.80755 4.95026 4.96255 4.98180 4.99884 5.10496 5.10939 5.19195 5.39575 5.49136 6.09833 6.35782 6.43574 6.49703 7.04731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.332 6.332 3 C 0.091 3.909 4 C -0.118 4.118 5 C -0.118 4.118 6 C -0.082 4.082 7 O -0.545 6.545 8 Si 0.812 3.188 9 C 0.089 3.911 10 O -0.316 6.316 11 C 0.037 3.963 12 C 0.515 3.485 13 O -0.568 6.568 14 N -0.697 5.697 15 C 0.108 3.892 16 H 0.088 0.912 17 C -0.111 4.111 18 C -0.111 4.111 19 H 0.105 0.895 20 C -0.584 4.584 21 S 2.408 3.592 22 C -0.647 4.647 23 O -0.991 6.991 24 O -0.989 6.989 25 C -0.160 4.160 26 C -0.160 4.160 27 C -0.161 4.161 28 H 0.067 0.933 29 H 0.066 0.934 30 H 0.115 0.885 31 H 0.153 0.847 32 H 0.062 0.938 33 H 0.371 0.629 34 H -0.263 1.263 35 H -0.294 1.294 36 H 0.125 0.875 37 H 0.124 0.876 38 H 0.420 0.580 39 H 0.119 0.881 40 H 0.095 0.905 41 H 0.162 0.838 42 H 0.171 0.829 43 H 0.153 0.847 44 H 0.126 0.874 45 H 0.151 0.849 46 H 0.060 0.940 47 H 0.107 0.893 48 H 0.166 0.834 49 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.234 6.535 -3.791 11.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.136 4.136 5 C -0.119 4.119 6 C -0.190 4.190 7 O -0.351 6.351 8 Si 0.713 3.287 9 C 0.044 3.956 10 O -0.230 6.230 11 C -0.041 4.041 12 C 0.302 3.698 13 O -0.445 6.445 14 N -0.350 5.350 15 C 0.003 3.997 16 H 0.107 0.893 17 C -0.150 4.150 18 C -0.130 4.130 19 H 0.123 0.877 20 C -0.716 4.716 21 S 2.597 3.403 22 C -0.799 4.799 23 O -0.988 6.988 24 O -0.986 6.986 25 C -0.199 4.199 26 C -0.178 4.178 27 C -0.180 4.180 28 H 0.085 0.915 29 H 0.085 0.915 30 H 0.133 0.867 31 H 0.170 0.830 32 H 0.079 0.921 33 H 0.220 0.780 34 H -0.188 1.188 35 H -0.222 1.222 36 H 0.143 0.857 37 H 0.141 0.859 38 H 0.258 0.742 39 H 0.137 0.863 40 H 0.114 0.886 41 H 0.180 0.820 42 H 0.189 0.811 43 H 0.172 0.828 44 H 0.145 0.855 45 H 0.170 0.830 46 H 0.079 0.921 47 H 0.126 0.874 48 H 0.184 0.816 49 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -6.700 4.682 -3.776 9.004 hybrid contribution -0.598 2.511 -0.510 2.631 sum -7.298 7.194 -4.286 11.108 Atomic orbital electron populations 1.23359 0.76374 1.05644 1.02349 1.86086 1.23396 1.26272 1.88915 1.18975 0.91937 0.85349 0.99130 1.20185 0.92427 0.96779 1.04233 1.19458 0.96030 0.90977 1.05463 1.25545 0.92770 1.12603 0.88041 1.86659 1.74019 1.42099 1.32361 0.92199 0.76224 0.78959 0.81349 1.18806 0.91745 0.84235 1.00849 1.86081 1.35482 1.11914 1.89475 1.22712 0.92631 0.81902 1.06847 1.20528 0.88364 0.85418 0.75527 1.90768 1.16620 1.87301 1.49846 1.45404 1.11159 1.03902 1.74584 1.21929 0.95922 0.84188 0.97686 0.89349 1.23317 1.00917 0.95712 0.95062 1.22417 0.99377 0.91974 0.99236 0.87705 1.30176 1.16253 1.04224 1.20913 1.07779 0.74591 0.79391 0.78503 1.30160 1.13762 1.22887 1.13052 1.93546 1.34410 1.83351 1.87472 1.93561 1.70943 1.74799 1.59292 1.23722 0.99374 0.99429 0.97368 1.21367 0.92065 1.00038 1.04367 1.21419 1.01604 0.90919 1.04057 0.91465 0.91530 0.86682 0.82988 0.92052 0.78037 1.18848 1.22153 0.85707 0.85857 0.74208 0.86252 0.88630 0.81970 0.81136 0.82827 0.85499 0.83040 0.92076 0.87440 0.81634 0.82120 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.09 9.81 113.37 1.11 1.02 16 2 O -0.33 -0.88 10.50 -93.35 -0.98 -1.86 16 3 C 0.09 0.30 6.69 22.49 0.15 0.45 16 4 C -0.12 -0.60 8.59 22.35 0.19 -0.40 16 5 C -0.12 -0.80 5.28 -19.78 -0.10 -0.90 16 6 C -0.08 -0.73 2.33 71.24 0.17 -0.57 16 7 O -0.55 -5.95 12.65 -148.98 -1.89 -7.84 16 8 Si 0.81 4.74 30.17 68.60 2.07 6.81 16 9 C 0.09 0.38 6.62 22.49 0.15 0.53 16 10 O -0.32 -1.72 8.55 -74.31 -0.64 -2.35 16 11 C 0.04 -0.12 5.22 71.23 0.37 0.26 16 12 C 0.52 1.35 7.91 87.65 0.69 2.05 16 13 O -0.57 -7.91 16.10 16.01 0.26 -7.65 16 14 N -0.70 2.88 5.26 -440.05 -2.32 0.56 16 15 C 0.11 -0.33 4.32 45.52 0.20 -0.14 16 16 H 0.09 0.15 7.46 -2.39 -0.02 0.13 16 17 C -0.11 1.10 7.39 31.12 0.23 1.33 16 18 C -0.11 0.87 3.53 -10.27 -0.04 0.83 16 19 H 0.10 -0.82 8.13 -2.39 -0.02 -0.84 16 20 C -0.58 7.24 5.64 71.98 0.41 7.65 16 21 S 2.41 -11.06 5.35 -56.49 -0.30 -11.37 16 22 C -0.65 7.47 10.62 113.37 1.20 8.68 16 23 O -0.99 -4.18 18.10 -127.37 -2.30 -6.49 16 24 O -0.99 -5.25 18.10 -127.37 -2.31 -7.56 16 25 C -0.16 0.44 7.43 31.12 0.23 0.67 16 26 C -0.16 0.23 9.03 22.35 0.20 0.43 16 27 C -0.16 0.18 9.03 22.35 0.20 0.38 16 28 H 0.07 -0.50 7.66 -2.39 -0.02 -0.52 16 29 H 0.07 -0.50 7.66 -2.39 -0.02 -0.52 16 30 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 31 H 0.15 0.32 5.12 -2.91 -0.01 0.31 16 32 H 0.06 0.70 7.83 -2.39 -0.02 0.68 16 33 H 0.37 3.23 8.58 -74.06 -0.64 2.60 16 34 H -0.26 -1.99 7.11 99.48 0.71 -1.28 16 35 H -0.29 -3.56 7.11 99.48 0.71 -2.85 16 36 H 0.13 -1.19 7.66 -2.39 -0.02 -1.21 16 37 H 0.12 -1.10 7.66 -2.39 -0.02 -1.12 16 38 H 0.42 -4.72 8.70 -92.70 -0.81 -5.52 16 39 H 0.12 -1.51 8.10 -2.39 -0.02 -1.53 16 40 H 0.10 -1.16 8.14 -2.38 -0.02 -1.18 16 41 H 0.16 -2.77 7.84 -2.39 -0.02 -2.79 16 42 H 0.17 -3.18 8.14 -2.39 -0.02 -3.20 16 43 H 0.15 -2.50 8.14 -2.39 -0.02 -2.52 16 44 H 0.13 -1.25 8.14 -2.40 -0.02 -1.27 16 45 H 0.15 -2.38 8.14 -2.39 -0.02 -2.40 16 46 H 0.06 0.11 8.14 -2.38 -0.02 0.09 16 47 H 0.11 -0.47 7.90 -2.39 -0.02 -0.49 16 48 H 0.17 -1.48 6.29 -2.91 -0.02 -1.50 16 49 H 0.16 -1.11 6.29 -2.91 -0.02 -1.13 16 Total: 0.00 -41.04 418.31 -3.44 -44.48 By element: Atomic # 1 Polarization: -28.60 SS G_CDS: -0.40 Total: -29.00 kcal Atomic # 6 Polarization: 16.89 SS G_CDS: 5.37 Total: 22.26 kcal Atomic # 7 Polarization: 2.88 SS G_CDS: -2.32 Total: 0.56 kcal Atomic # 8 Polarization: -25.89 SS G_CDS: -7.85 Total: -33.74 kcal Atomic # 14 Polarization: 4.74 SS G_CDS: 2.07 Total: 6.81 kcal Atomic # 16 Polarization: -11.06 SS G_CDS: -0.30 Total: -11.37 kcal Total: -41.04 -3.44 -44.48 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -109.179 kcal (2) G-P(sol) polarization free energy of solvation -41.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -150.217 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.438 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -44.476 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.655 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds