Wall clock time and date at job start Tue Mar 9 2021 12:55:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46896 * 111.00126 * 2 1 4 4 C 1.50699 * 109.47090 * 293.95397 * 3 2 1 5 5 O 1.21280 * 120.00291 * 0.02562 * 4 3 2 6 6 N 1.34776 * 120.00160 * 179.97438 * 4 3 2 7 7 C 1.46501 * 120.00210 * 179.97438 * 6 4 3 8 8 H 1.08999 * 112.84676 * 23.80908 * 7 6 4 9 9 C 1.53775 * 113.61326 * 155.00143 * 7 6 4 10 10 C 1.53782 * 87.08018 * 89.12002 * 9 7 6 11 11 H 1.08997 * 113.61305 * 270.88100 * 10 9 7 12 12 C 1.53007 * 113.61505 * 140.06520 * 10 9 7 13 13 S 1.81399 * 109.47040 * 174.99870 * 12 10 9 14 14 C 1.81402 * 101.91975 * 179.97438 * 13 12 10 15 15 O 1.42095 * 108.57824 * 294.48554 * 13 12 10 16 16 O 1.42102 * 108.57643 * 65.51135 * 13 12 10 17 17 C 1.53772 * 113.61835 * 252.50131 * 7 6 4 18 18 C 1.39675 * 110.99806 * 123.95121 * 2 1 3 19 19 C 1.38897 * 120.07026 * 116.04884 * 18 2 1 20 20 C 1.50689 * 120.04064 * 359.97438 * 19 18 2 21 21 O 1.42908 * 109.46690 * 75.00467 * 20 19 18 22 22 Si 1.86298 * 109.47688 * 195.00166 * 20 19 18 23 23 C 1.38130 * 119.92066 * 179.97438 * 19 18 2 24 24 C 1.38261 * 120.07450 * 359.97438 * 23 19 18 25 25 C 1.50706 * 119.92087 * 180.02562 * 24 23 19 26 26 F 1.39898 * 109.47336 * 89.99979 * 25 24 23 27 27 F 1.39902 * 109.46730 * 209.99890 * 25 24 23 28 28 F 1.39896 * 109.47124 * 329.99341 * 25 24 23 29 29 C 1.38302 * 120.15183 * 0.02562 * 24 23 19 30 30 C 1.38084 * 120.07782 * 359.70144 * 29 24 23 31 31 H 1.09009 * 109.47037 * 296.04385 * 1 2 3 32 32 H 1.08992 * 109.47254 * 56.04810 * 1 2 3 33 33 H 1.09004 * 109.47303 * 176.04758 * 1 2 3 34 34 H 1.09003 * 109.47282 * 53.95191 * 3 2 1 35 35 H 1.09001 * 109.47321 * 173.95223 * 3 2 1 36 36 H 0.97003 * 120.00191 * 0.02562 * 6 4 3 37 37 H 1.09006 * 113.61258 * 203.66638 * 9 7 6 38 38 H 1.09005 * 113.61886 * 334.56963 * 9 7 6 39 39 H 1.08997 * 109.46610 * 295.00162 * 12 10 9 40 40 H 1.08995 * 109.46884 * 54.99708 * 12 10 9 41 41 H 1.09001 * 109.46925 * 59.99901 * 14 13 12 42 42 H 1.08999 * 109.46851 * 180.02562 * 14 13 12 43 43 H 1.09000 * 109.46868 * 300.00089 * 14 13 12 44 44 H 1.09003 * 113.61410 * 25.43253 * 17 7 6 45 45 H 1.09001 * 113.61865 * 156.33543 * 17 7 6 46 46 H 1.09005 * 109.47662 * 315.00744 * 20 19 18 47 47 H 0.96700 * 113.99506 * 299.99593 * 21 20 19 48 48 H 1.48496 * 109.99750 * 298.68902 * 22 20 19 49 49 H 1.48502 * 109.99768 * 59.99857 * 22 20 19 50 50 H 1.08003 * 119.95971 * 180.02562 * 23 19 18 51 51 H 1.08005 * 119.96089 * 179.97438 * 29 24 23 52 52 H 1.07993 * 120.04132 * 180.27929 * 30 29 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9955 1.3714 0.0000 4 6 1.6370 2.0471 -1.2984 5 8 1.0047 1.4456 -2.1407 6 7 2.0180 3.3201 -1.5233 7 6 1.6700 3.9768 -2.7858 8 1 0.7973 3.5347 -3.2663 9 6 1.6075 5.5100 -2.6859 10 6 3.1053 5.5152 -3.0345 11 1 3.7566 5.4473 -2.1632 12 6 3.5080 6.6395 -3.9911 13 16 5.3089 6.6321 -4.2088 14 6 5.5533 8.0158 -5.3560 15 8 5.9163 6.9603 -2.9668 16 8 5.6805 5.4284 -4.8663 17 6 2.8670 4.1658 -3.7324 18 6 1.9695 -0.7283 1.0817 19 6 2.7117 -1.8813 0.8606 20 6 2.9778 -2.3489 -0.5470 21 8 3.9738 -1.5168 -1.1450 22 14 3.5801 -4.1115 -0.5125 23 6 3.2056 -2.5989 1.9326 24 6 2.9624 -2.1702 3.2244 25 6 3.5035 -2.9554 4.3914 26 9 4.7771 -2.4807 4.7226 27 9 2.6499 -2.8060 5.4897 28 9 3.5855 -4.3084 4.0452 29 6 2.2238 -1.0225 3.4480 30 6 1.7318 -0.2973 2.3809 31 1 -0.3633 0.4512 0.9234 32 1 -0.3633 0.5739 -0.8524 33 1 -0.3634 -1.0252 -0.0708 34 1 1.5611 1.9273 0.8309 35 1 3.0797 1.3444 0.1083 36 1 2.5234 3.8014 -0.8496 37 1 0.9801 5.9721 -3.4482 38 1 1.3918 5.8738 -1.6812 39 1 3.0247 6.4860 -4.9560 40 1 3.1960 7.5981 -3.5769 41 1 5.1811 8.9342 -4.9021 42 1 6.6157 8.1229 -5.5750 43 1 5.0099 7.8214 -6.2807 44 1 3.6682 3.4442 -3.5726 45 1 2.5841 4.2604 -4.7808 46 1 2.0581 -2.2905 -1.1293 47 1 3.7273 -0.5832 -1.1963 48 1 4.8504 -4.1993 0.2515 49 1 2.5532 -4.9871 0.1072 50 1 3.7832 -3.4953 1.7614 51 1 2.0353 -0.6907 4.4584 52 1 1.1589 0.6012 2.5561 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534690_6406254.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:14 Heat of formation + Delta-G solvation = -209.816921 kcal Electronic energy + Delta-G solvation = -41645.729958 eV Core-core repulsion = 35712.062591 eV Total energy + Delta-G solvation = -5933.667367 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 437.136 amu Computer time = 1.43 seconds Orbital eigenvalues (eV) -51.38747 -48.91463 -48.84693 -41.91835 -41.13500 -39.62446 -37.95862 -37.66973 -37.60888 -36.98880 -34.69812 -33.13131 -32.27660 -31.18936 -30.22641 -29.14367 -27.73374 -27.04847 -26.69511 -25.30309 -24.16614 -23.41856 -22.27819 -21.62670 -20.31708 -19.79179 -19.73845 -19.68863 -19.58492 -18.60305 -18.21625 -17.78917 -17.56853 -17.22121 -17.08851 -16.98427 -16.83555 -16.40159 -16.28164 -16.09204 -15.78903 -15.73275 -15.65066 -15.36661 -15.27114 -15.20273 -15.02902 -15.00955 -14.98321 -14.79667 -14.70000 -14.15931 -14.09298 -14.00140 -13.94327 -13.90721 -13.74967 -13.46712 -13.33940 -13.13960 -13.07708 -12.99336 -12.90236 -12.84070 -12.66934 -12.33431 -12.31518 -12.13971 -11.83787 -11.47732 -11.29032 -11.09831 -10.99732 -10.90498 -10.37648 -10.21686 -10.06782 -9.70579 -4.90776 -0.88920 -0.50492 -0.13470 1.29468 1.41468 1.55683 1.57024 1.84281 1.86105 1.92588 2.05705 2.46501 2.64511 2.76683 2.77272 3.12960 3.17414 3.39548 3.42433 3.44886 3.48514 3.60900 3.68705 3.78415 3.81389 3.92887 3.94455 4.02430 4.09374 4.11226 4.13151 4.22313 4.23555 4.33349 4.40415 4.42415 4.44420 4.52297 4.55400 4.78867 4.79789 4.83657 4.84139 4.87936 4.96228 4.98580 5.02093 5.05491 5.06693 5.19765 5.25412 5.52475 5.62202 5.99916 6.52042 6.55693 7.23955 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.503 5.503 3 C 0.035 3.965 4 C 0.518 3.482 5 O -0.555 6.555 6 N -0.706 5.706 7 C 0.114 3.886 8 H 0.092 0.908 9 C -0.113 4.113 10 C -0.113 4.113 11 H 0.100 0.900 12 C -0.583 4.583 13 S 2.406 3.594 14 C -0.647 4.647 15 O -0.992 6.992 16 O -0.988 6.988 17 C -0.160 4.160 18 C 0.135 3.865 19 C -0.099 4.099 20 C -0.072 4.072 21 O -0.541 6.541 22 Si 0.789 3.211 23 C -0.084 4.084 24 C -0.187 4.187 25 C 0.507 3.493 26 F -0.179 7.179 27 F -0.173 7.173 28 F -0.185 7.185 29 C -0.052 4.052 30 C -0.134 4.134 31 H 0.050 0.950 32 H 0.084 0.916 33 H 0.066 0.934 34 H 0.103 0.897 35 H 0.122 0.878 36 H 0.415 0.585 37 H 0.118 0.882 38 H 0.092 0.908 39 H 0.163 0.837 40 H 0.169 0.831 41 H 0.153 0.847 42 H 0.126 0.874 43 H 0.152 0.848 44 H 0.059 0.941 45 H 0.106 0.894 46 H 0.089 0.911 47 H 0.370 0.630 48 H -0.286 1.286 49 H -0.264 1.264 50 H 0.126 0.874 51 H 0.161 0.839 52 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.977 10.553 -2.429 12.368 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.120 4.120 2 N -0.224 5.224 3 C -0.094 4.094 4 C 0.304 3.696 5 O -0.432 6.432 6 N -0.359 5.359 7 C 0.009 3.991 8 H 0.111 0.889 9 C -0.152 4.152 10 C -0.132 4.132 11 H 0.119 0.881 12 C -0.715 4.715 13 S 2.596 3.404 14 C -0.799 4.799 15 O -0.990 6.990 16 O -0.985 6.985 17 C -0.199 4.199 18 C 0.041 3.959 19 C -0.100 4.100 20 C -0.181 4.181 21 O -0.347 6.347 22 Si 0.691 3.309 23 C -0.102 4.102 24 C -0.189 4.189 25 C 0.453 3.547 26 F -0.161 7.161 27 F -0.154 7.154 28 F -0.167 7.167 29 C -0.070 4.070 30 C -0.153 4.153 31 H 0.068 0.932 32 H 0.103 0.897 33 H 0.085 0.915 34 H 0.121 0.879 35 H 0.140 0.860 36 H 0.252 0.748 37 H 0.136 0.864 38 H 0.110 0.890 39 H 0.181 0.819 40 H 0.187 0.813 41 H 0.171 0.829 42 H 0.144 0.856 43 H 0.170 0.830 44 H 0.078 0.922 45 H 0.124 0.876 46 H 0.107 0.893 47 H 0.219 0.781 48 H -0.213 1.213 49 H -0.190 1.190 50 H 0.143 0.857 51 H 0.179 0.821 52 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges -5.092 8.077 -2.636 9.905 hybrid contribution -0.600 1.878 1.676 2.588 sum -5.692 9.955 -0.960 11.507 Atomic orbital electron populations 1.22602 0.83709 1.03362 1.02363 1.59148 1.10260 1.13118 1.39907 1.22210 1.03490 0.88060 0.95686 1.20640 0.78588 0.81586 0.88740 1.90720 1.40432 1.64512 1.47516 1.45596 1.57526 1.13296 1.19435 1.21834 0.97967 0.94356 0.84990 0.88943 1.23308 0.94118 0.93172 1.04591 1.22417 0.99678 0.93014 0.98112 0.88142 1.30167 1.21993 1.08898 1.10404 1.07824 0.79723 0.77000 0.75886 1.30164 1.12780 1.19357 1.17580 1.93547 1.75910 1.85523 1.43978 1.93561 1.82725 1.45453 1.76775 1.23703 0.98840 0.96734 1.00583 1.18830 0.94389 0.93080 0.89592 1.20318 0.98174 0.95518 0.96023 1.25201 0.97260 1.06415 0.89203 1.86692 1.42947 1.22867 1.82208 0.92350 0.77387 0.73005 0.88125 1.20788 0.98382 0.99396 0.91634 1.19984 1.06714 1.00243 0.91934 1.18386 0.75775 0.77518 0.82987 1.93235 1.41325 1.88095 1.93399 1.93206 1.70290 1.95396 1.56498 1.93188 1.96176 1.35237 1.92075 1.21139 0.92898 0.91223 1.01766 1.21965 1.00537 1.01556 0.91290 0.93197 0.89719 0.91469 0.87882 0.86024 0.74847 0.86400 0.88968 0.81890 0.81292 0.82877 0.85560 0.82966 0.92208 0.87588 0.89317 0.78150 1.21285 1.19010 0.85679 0.82111 0.81488 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 9.03 127.69 1.15 1.10 16 2 N -0.50 1.02 3.19 -724.42 -2.31 -1.29 16 3 C 0.03 -0.23 4.90 85.56 0.42 0.19 16 4 C 0.52 -1.01 7.52 87.66 0.66 -0.35 16 5 O -0.55 -3.69 13.93 -3.03 -0.04 -3.73 16 6 N -0.71 4.45 5.26 -440.06 -2.32 2.13 16 7 C 0.11 -0.59 4.32 45.51 0.20 -0.39 16 8 H 0.09 -0.13 7.46 -2.39 -0.02 -0.15 16 9 C -0.11 1.22 7.39 31.12 0.23 1.45 16 10 C -0.11 0.91 3.53 -10.27 -0.04 0.88 16 11 H 0.10 -0.73 8.13 -2.39 -0.02 -0.75 16 12 C -0.58 7.24 5.65 71.98 0.41 7.65 16 13 S 2.41 -10.31 5.35 -56.49 -0.30 -10.61 16 14 C -0.65 7.35 10.62 113.37 1.20 8.55 16 15 O -0.99 -4.83 18.10 -127.37 -2.31 -7.13 16 16 O -0.99 -5.43 18.10 -127.37 -2.30 -7.73 16 17 C -0.16 0.60 7.43 31.12 0.23 0.83 16 18 C 0.14 -0.12 4.62 38.22 0.18 0.06 16 19 C -0.10 -0.35 5.28 -19.74 -0.10 -0.46 16 20 C -0.07 -0.28 2.30 71.23 0.16 -0.11 16 21 O -0.54 -3.06 12.65 -148.98 -1.89 -4.95 16 22 Si 0.79 2.71 30.41 68.60 2.09 4.79 16 23 C -0.08 -0.47 8.01 22.25 0.18 -0.29 16 24 C -0.19 -0.67 5.46 -19.84 -0.11 -0.78 16 25 C 0.51 2.90 3.36 71.24 0.24 3.14 16 26 F -0.18 -1.31 17.30 44.97 0.78 -0.53 16 27 F -0.17 -0.83 16.46 44.97 0.74 -0.09 16 28 F -0.19 -1.56 16.46 44.97 0.74 -0.82 16 29 C -0.05 0.10 9.39 22.25 0.21 0.30 16 30 C -0.13 0.59 8.66 22.40 0.19 0.79 16 31 H 0.05 -0.30 7.36 -2.38 -0.02 -0.31 16 32 H 0.08 0.12 5.82 -2.39 -0.01 0.11 16 33 H 0.07 -0.03 8.14 -2.38 -0.02 -0.05 16 34 H 0.10 -1.25 7.46 -2.39 -0.02 -1.27 16 35 H 0.12 -1.04 8.06 -2.39 -0.02 -1.06 16 36 H 0.41 -4.81 8.70 -92.71 -0.81 -5.62 16 37 H 0.12 -1.60 8.10 -2.38 -0.02 -1.62 16 38 H 0.09 -1.17 8.14 -2.38 -0.02 -1.19 16 39 H 0.16 -2.83 7.85 -2.39 -0.02 -2.85 16 40 H 0.17 -3.13 8.14 -2.39 -0.02 -3.15 16 41 H 0.15 -2.46 8.14 -2.39 -0.02 -2.48 16 42 H 0.13 -1.21 8.14 -2.39 -0.02 -1.23 16 43 H 0.15 -2.39 8.14 -2.39 -0.02 -2.41 16 44 H 0.06 0.07 8.14 -2.39 -0.02 0.05 16 45 H 0.11 -0.57 7.90 -2.39 -0.02 -0.59 16 46 H 0.09 0.28 7.78 -2.38 -0.02 0.26 16 47 H 0.37 0.96 8.38 -74.06 -0.62 0.34 16 48 H -0.29 -2.59 6.81 99.48 0.68 -1.92 16 49 H -0.26 -1.62 7.11 99.48 0.71 -0.92 16 50 H 0.13 0.93 4.48 -2.91 -0.01 0.92 16 51 H 0.16 -0.95 7.60 -2.91 -0.02 -0.97 16 52 H 0.17 -1.76 7.14 -2.91 -0.02 -1.78 16 Total: 0.00 -33.89 447.79 -2.13 -36.02 By element: Atomic # 1 Polarization: -28.20 SS G_CDS: -0.42 Total: -28.62 kcal Atomic # 6 Polarization: 17.15 SS G_CDS: 5.41 Total: 22.56 kcal Atomic # 7 Polarization: 5.47 SS G_CDS: -4.63 Total: 0.84 kcal Atomic # 8 Polarization: -17.01 SS G_CDS: -6.54 Total: -23.55 kcal Atomic # 9 Polarization: -3.70 SS G_CDS: 2.26 Total: -1.44 kcal Atomic # 14 Polarization: 2.71 SS G_CDS: 2.09 Total: 4.79 kcal Atomic # 16 Polarization: -10.31 SS G_CDS: -0.30 Total: -10.61 kcal Total: -33.89 -2.13 -36.02 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_6406254.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -173.796 kcal (2) G-P(sol) polarization free energy of solvation -33.895 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -207.691 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.126 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.021 kcal (6) G-S(sol) free energy of system = (1) + (5) -209.817 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.43 seconds