Wall clock time and date at job start Tue Mar 9 2021 12:55:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.35959 * 117.00006 * 2 1 4 4 C 1.39453 * 120.12105 * 179.97438 * 3 2 1 5 5 O 1.34766 * 133.23940 * 0.02562 * 4 3 2 6 6 C 1.34932 * 110.84040 * 180.02562 * 5 4 3 7 7 C 1.46990 * 125.13819 * 180.02562 * 6 5 4 8 8 O 1.21659 * 119.99954 * 179.97438 * 7 6 5 9 9 N 1.34773 * 120.00409 * 359.97438 * 7 6 5 10 10 C 1.46502 * 120.00578 * 180.02562 * 9 7 6 11 11 H 1.08998 * 112.84308 * 336.19442 * 10 9 7 12 12 C 1.53776 * 113.61499 * 107.50067 * 10 9 7 13 13 C 1.53777 * 87.08458 * 89.11968 * 12 10 9 14 14 H 1.08995 * 113.69052 * 270.87527 * 13 12 10 15 15 C 1.52999 * 113.61956 * 139.97711 * 13 12 10 16 16 S 1.81403 * 109.46912 * 87.50077 * 15 13 12 17 17 C 1.81401 * 101.91942 * 180.02562 * 16 15 13 18 18 O 1.42101 * 108.58109 * 294.49158 * 16 15 13 19 19 O 1.42103 * 108.57608 * 65.51562 * 16 15 13 20 20 C 1.53784 * 113.61750 * 205.00094 * 10 9 7 21 21 C 1.35805 * 109.72057 * 359.97438 * 6 5 4 22 22 C 1.40609 * 119.13455 * 180.02562 * 4 3 2 23 23 C 1.39770 * 120.12172 * 359.75143 * 22 4 3 24 24 C 1.50706 * 120.09530 * 180.27049 * 23 22 4 25 25 O 1.42897 * 109.47206 * 285.23014 * 24 23 22 26 26 Si 1.86299 * 109.47241 * 165.22644 * 24 23 22 27 27 C 1.36627 * 119.81585 * 0.50434 * 23 22 4 28 28 C 1.38262 * 120.12296 * 359.97438 * 3 2 1 29 29 H 1.09004 * 109.46648 * 300.00177 * 1 2 3 30 30 H 1.09002 * 109.47406 * 59.99900 * 1 2 3 31 31 H 1.09000 * 109.47239 * 180.02562 * 1 2 3 32 32 H 0.97007 * 119.99802 * 359.97438 * 9 7 6 33 33 H 1.09002 * 113.61276 * 203.66640 * 12 10 9 34 34 H 1.08999 * 113.61925 * 334.56449 * 12 10 9 35 35 H 1.08997 * 109.47178 * 207.50455 * 15 13 12 36 36 H 1.09002 * 109.46826 * 327.50735 * 15 13 12 37 37 H 1.08990 * 109.46987 * 60.00679 * 17 16 15 38 38 H 1.09001 * 109.46430 * 180.02562 * 17 16 15 39 39 H 1.08995 * 109.47023 * 300.00189 * 17 16 15 40 40 H 1.09004 * 113.61071 * 25.42570 * 20 10 9 41 41 H 1.08997 * 113.61550 * 156.24821 * 20 10 9 42 42 H 1.07999 * 126.95812 * 179.97438 * 21 6 5 43 43 H 1.08998 * 109.46756 * 45.22892 * 24 23 22 44 44 H 0.96699 * 113.99870 * 299.99618 * 25 24 23 45 45 H 1.48508 * 109.99841 * 58.68488 * 26 24 23 46 46 H 1.48494 * 110.00019 * 180.02562 * 26 24 23 47 47 H 1.08002 * 119.75872 * 179.77657 * 27 23 22 48 48 H 1.08002 * 119.65752 * 359.96391 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4388 1.2873 0.0005 5 8 4.4141 0.3573 0.0007 6 6 5.6317 0.9386 0.0018 7 6 6.9131 0.2183 0.0018 8 8 7.9596 0.8387 0.0024 9 7 6.9286 -1.1293 0.0010 10 6 8.2057 -1.8472 0.0015 11 1 9.0252 -1.2532 -0.4030 12 6 8.5341 -2.5192 1.3451 13 6 7.7798 -3.7533 0.8227 14 1 6.7131 -3.7417 1.0463 15 6 8.4487 -5.0802 1.1869 16 16 7.8616 -5.6268 2.8139 17 6 8.7671 -7.1829 3.0357 18 8 8.3103 -4.6991 3.7923 19 8 6.4742 -5.9192 2.7198 20 6 8.1174 -3.2620 -0.5949 21 6 5.4945 2.2897 0.0019 22 6 4.0554 2.5510 0.0011 23 6 3.2766 3.7115 -0.0042 24 6 3.9382 5.0656 -0.0098 25 8 4.4649 5.3438 1.2892 26 14 2.6851 6.3673 -0.4637 27 6 1.9137 3.6151 0.0006 28 6 1.2958 2.3726 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 -0.3634 -1.0277 0.0005 32 1 6.0942 -1.6240 0.0009 33 1 9.5994 -2.6913 1.4984 34 1 8.0539 -2.0435 2.2002 35 1 8.1969 -5.8315 0.4385 36 1 9.5300 -4.9457 1.2172 37 1 9.8388 -6.9862 3.0118 38 1 8.4998 -7.6251 3.9954 39 1 8.5063 -7.8726 2.2330 40 1 7.3006 -3.3858 -1.3060 41 1 9.0685 -3.6365 -0.9733 42 1 6.2875 3.0229 0.0031 43 1 4.7482 5.0711 -0.7391 44 1 3.7984 5.3548 1.9897 45 1 1.5596 6.3485 0.5051 46 1 3.3252 7.7071 -0.4733 47 1 1.3128 4.5125 0.0002 48 1 0.2174 2.3119 -0.0015 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_6672420.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:24 Heat of formation + Delta-G solvation = -97.883694 kcal Electronic energy + Delta-G solvation = -34742.179481 eV Core-core repulsion = 29859.949933 eV Total energy + Delta-G solvation = -4882.229548 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.121 amu Computer time = 3.92 seconds Orbital eigenvalues (eV) -43.64973 -41.40795 -40.63912 -39.46501 -39.10325 -37.97854 -37.07366 -37.01367 -34.87062 -33.54643 -31.97352 -31.47849 -30.83881 -30.33059 -28.66844 -26.91684 -26.39165 -25.53841 -23.94515 -23.87387 -22.12340 -21.66955 -20.50872 -20.00185 -19.75574 -19.00106 -18.57760 -17.84522 -17.80480 -17.65869 -17.37392 -17.13057 -17.02117 -16.91854 -16.62880 -16.21092 -16.06500 -15.91985 -15.79185 -15.34449 -15.26166 -14.70939 -14.62671 -14.50783 -14.38913 -14.30079 -14.22383 -14.05782 -13.66801 -13.44656 -13.43709 -13.31965 -13.18778 -13.06967 -12.97665 -12.60855 -12.59760 -12.33720 -12.31187 -12.12065 -12.01504 -11.66659 -11.51704 -11.41774 -11.19980 -10.92593 -10.59785 -10.26520 -9.75541 -8.97633 -4.99098 -1.09597 -0.57385 0.13717 0.72502 1.22336 1.30774 1.53352 1.67316 1.90744 1.92962 2.05174 2.06768 2.42040 2.55869 2.88995 3.18054 3.22070 3.23770 3.37954 3.43624 3.52280 3.58119 3.62336 3.72227 3.75679 3.84973 3.88710 3.92183 4.01650 4.10449 4.11147 4.11242 4.19636 4.25663 4.47405 4.48584 4.49263 4.53200 4.56011 4.57746 4.66555 4.77497 4.85054 4.90986 4.91662 4.94822 5.08785 5.24697 5.30692 5.39574 5.65196 6.16692 6.32628 6.40741 6.92686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.310 6.310 3 C 0.151 3.849 4 C 0.047 3.953 5 O -0.174 6.174 6 C -0.025 4.025 7 C 0.607 3.393 8 O -0.506 6.506 9 N -0.702 5.702 10 C 0.117 3.883 11 H 0.114 0.886 12 C -0.151 4.151 13 C -0.108 4.108 14 H 0.105 0.895 15 C -0.601 4.601 16 S 2.416 3.584 17 C -0.659 4.659 18 O -0.933 6.933 19 O -0.939 6.939 20 C -0.129 4.129 21 C -0.101 4.101 22 C -0.082 4.082 23 C -0.095 4.095 24 C -0.073 4.073 25 O -0.525 6.525 26 Si 0.692 3.308 27 C -0.096 4.096 28 C -0.178 4.178 29 H 0.060 0.940 30 H 0.061 0.939 31 H 0.106 0.894 32 H 0.410 0.590 33 H 0.103 0.897 34 H 0.084 0.916 35 H 0.137 0.863 36 H 0.136 0.864 37 H 0.129 0.871 38 H 0.130 0.870 39 H 0.128 0.872 40 H 0.082 0.918 41 H 0.105 0.895 42 H 0.175 0.825 43 H 0.119 0.881 44 H 0.376 0.624 45 H -0.258 1.258 46 H -0.255 1.255 47 H 0.140 0.860 48 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.754 -3.683 -4.597 6.503 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.105 3.895 4 C -0.002 4.002 5 O -0.075 6.075 6 C -0.075 4.075 7 C 0.392 3.608 8 O -0.382 6.382 9 N -0.353 5.353 10 C 0.012 3.988 11 H 0.132 0.868 12 C -0.190 4.190 13 C -0.128 4.128 14 H 0.124 0.876 15 C -0.730 4.730 16 S 2.598 3.402 17 C -0.808 4.808 18 O -0.931 6.931 19 O -0.936 6.936 20 C -0.168 4.168 21 C -0.122 4.122 22 C -0.083 4.083 23 C -0.096 4.096 24 C -0.183 4.183 25 O -0.331 6.331 26 Si 0.593 3.407 27 C -0.114 4.114 28 C -0.196 4.196 29 H 0.078 0.922 30 H 0.080 0.920 31 H 0.124 0.876 32 H 0.245 0.755 33 H 0.122 0.878 34 H 0.103 0.897 35 H 0.155 0.845 36 H 0.154 0.846 37 H 0.147 0.853 38 H 0.149 0.851 39 H 0.147 0.853 40 H 0.101 0.899 41 H 0.123 0.877 42 H 0.192 0.808 43 H 0.137 0.863 44 H 0.223 0.777 45 H -0.183 1.183 46 H -0.180 1.180 47 H 0.158 0.842 48 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -2.407 -2.602 -4.099 5.419 hybrid contribution 0.005 -0.993 0.715 1.224 sum -2.401 -3.595 -3.384 5.490 Atomic orbital electron populations 1.23195 0.77293 1.04791 1.01776 1.86179 1.22176 1.25656 1.88324 1.17751 0.86506 0.85907 0.99332 1.18779 0.87451 0.86960 1.06975 1.84052 1.12647 1.34725 1.76105 1.21913 0.83846 0.92590 1.09183 1.16589 0.85494 0.81989 0.76718 1.90925 1.30304 1.67381 1.49590 1.45580 1.09779 1.05680 1.74275 1.21909 0.86690 0.92817 0.97355 0.86787 1.23660 1.01955 0.95115 0.98240 1.22390 1.00297 0.91057 0.99010 0.87640 1.30307 1.11927 1.07515 1.23241 1.08004 0.76614 0.77702 0.77900 1.30296 1.15532 1.22763 1.12182 1.93625 1.82923 1.60092 1.56424 1.93620 1.28682 1.84794 1.86518 1.23346 1.03856 0.94053 0.95520 1.22751 0.94793 0.94276 1.00384 1.19401 0.92603 0.92048 1.04245 1.19399 0.92813 0.94317 1.03022 1.25033 1.06802 0.97909 0.88562 1.86639 1.37600 1.92579 1.16311 0.94907 0.77559 0.77893 0.90377 1.20587 0.93482 0.97801 0.99502 1.20970 1.00366 0.90524 1.07789 0.92154 0.92023 0.87612 0.75462 0.87844 0.89683 0.84502 0.84552 0.85260 0.85120 0.85319 0.89932 0.87697 0.80758 0.86344 0.77690 1.18321 1.17983 0.84243 0.83488 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 51. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.52 10.50 -19.61 -0.21 -0.73 16 3 C 0.15 0.28 6.70 -39.12 -0.26 0.02 16 4 C 0.05 0.16 7.35 -38.24 -0.28 -0.12 16 5 O -0.17 -0.62 10.28 2.67 0.03 -0.59 16 6 C -0.03 -0.08 7.07 -36.91 -0.26 -0.34 16 7 C 0.61 2.00 7.80 -12.72 -0.10 1.90 16 8 O -0.51 -3.02 16.43 5.23 0.09 -2.94 16 9 N -0.70 -0.43 5.26 -54.23 -0.29 -0.72 16 10 C 0.12 -0.07 4.32 -67.12 -0.29 -0.36 16 11 H 0.11 0.02 7.46 -51.93 -0.39 -0.37 16 12 C -0.15 0.11 7.43 -25.92 -0.19 -0.08 16 13 C -0.11 0.23 3.53 -89.81 -0.32 -0.09 16 14 H 0.11 -0.19 8.13 -51.93 -0.42 -0.61 16 15 C -0.60 2.57 5.64 37.16 0.21 2.78 16 16 S 2.42 -3.46 5.35 -107.50 -0.58 -4.04 16 17 C -0.66 2.84 10.62 101.05 1.07 3.91 16 18 O -0.93 -2.50 18.10 -57.83 -1.05 -3.54 16 19 O -0.94 -2.60 18.10 -57.83 -1.05 -3.64 16 20 C -0.13 0.38 7.39 -25.91 -0.19 0.19 16 21 C -0.10 -0.32 10.68 -37.23 -0.40 -0.71 16 22 C -0.08 -0.22 6.16 -105.21 -0.65 -0.87 16 23 C -0.09 -0.08 5.26 -104.63 -0.55 -0.63 16 24 C -0.07 -0.01 2.70 36.01 0.10 0.09 16 25 O -0.53 -0.87 12.88 -35.23 -0.45 -1.32 16 26 Si 0.69 -0.92 30.25 -169.99 -5.14 -6.06 16 27 C -0.10 0.06 8.62 -39.97 -0.34 -0.29 16 28 C -0.18 0.08 9.03 -39.37 -0.36 -0.27 16 29 H 0.06 -0.21 7.66 -51.93 -0.40 -0.61 16 30 H 0.06 -0.23 7.66 -51.93 -0.40 -0.63 16 31 H 0.11 -0.39 8.14 -51.93 -0.42 -0.81 16 32 H 0.41 -0.34 8.42 -40.82 -0.34 -0.68 16 33 H 0.10 -0.22 7.90 -51.93 -0.41 -0.63 16 34 H 0.08 0.08 8.14 -51.93 -0.42 -0.34 16 35 H 0.14 -0.89 8.14 -51.93 -0.42 -1.32 16 36 H 0.14 -0.88 7.84 -51.92 -0.41 -1.29 16 37 H 0.13 -0.78 8.14 -51.93 -0.42 -1.20 16 38 H 0.13 -0.52 8.14 -51.92 -0.42 -0.94 16 39 H 0.13 -0.78 8.14 -51.93 -0.42 -1.20 16 40 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 41 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 42 H 0.18 0.42 8.06 -52.49 -0.42 0.00 16 43 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 44 H 0.38 -0.48 8.70 45.56 0.40 -0.09 16 45 H -0.26 0.03 6.69 56.52 0.38 0.41 16 46 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 47 H 0.14 -0.35 4.81 -52.49 -0.25 -0.61 16 48 H 0.15 -0.47 6.26 -52.49 -0.33 -0.80 16 LS Contribution 417.00 15.07 6.28 6.28 Total: 0.00 -14.54 417.00 -10.56 -25.11 By element: Atomic # 1 Polarization: -7.47 SS G_CDS: -6.39 Total: -13.86 kcal Atomic # 6 Polarization: 7.87 SS G_CDS: -1.82 Total: 6.05 kcal Atomic # 7 Polarization: -0.43 SS G_CDS: -0.29 Total: -0.72 kcal Atomic # 8 Polarization: -10.13 SS G_CDS: -2.64 Total: -12.77 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.14 Total: -6.06 kcal Atomic # 16 Polarization: -3.46 SS G_CDS: -0.58 Total: -4.04 kcal Total LS contribution 6.28 Total: 6.28 kcal Total: -14.54 -10.56 -25.11 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_6672420.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.775 kcal (2) G-P(sol) polarization free energy of solvation -14.544 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -87.319 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.564 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.109 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.884 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.92 seconds