Wall clock time and date at job start Tue Mar 9 2021 12:55:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81407 * 1 3 3 O 1.42090 * 108.57880 * 2 1 4 4 O 1.42104 * 108.57392 * 228.97528 * 2 1 3 5 5 C 1.81400 * 101.92269 * 114.48945 * 2 1 3 6 6 C 1.53001 * 109.47019 * 179.97438 * 5 2 1 7 7 H 1.08995 * 112.84659 * 43.80733 * 6 5 2 8 8 C 1.53778 * 113.61265 * 174.99810 * 6 5 2 9 9 C 1.53782 * 87.08099 * 140.06677 * 8 6 5 10 10 H 1.09004 * 113.61842 * 219.93757 * 9 8 6 11 11 N 1.46498 * 113.61528 * 89.11408 * 9 8 6 12 12 C 1.34778 * 119.99967 * 154.99962 * 11 9 8 13 13 O 1.21634 * 120.00065 * 0.02562 * 12 11 9 14 14 C 1.47189 * 119.99794 * 180.02562 * 12 11 9 15 15 C 1.36008 * 123.46364 * 0.02562 * 14 12 11 16 16 S 1.70447 * 110.82000 * 179.70580 * 15 14 12 17 17 C 1.75506 * 92.44178 * 0.35934 * 16 15 14 18 18 C 1.50703 * 124.71117 * 179.90581 * 17 16 15 19 19 O 1.42896 * 109.47055 * 119.69758 * 18 17 16 20 20 Si 1.86304 * 109.46911 * 359.69650 * 18 17 16 21 21 C 1.32769 * 110.57652 * 359.63934 * 17 16 15 22 22 C 1.53775 * 113.69182 * 272.53449 * 6 5 2 23 23 H 1.09003 * 109.46821 * 305.50861 * 1 2 3 24 24 H 1.09000 * 109.47173 * 65.51127 * 1 2 3 25 25 H 1.09000 * 109.46785 * 185.51030 * 1 2 3 26 26 H 1.09010 * 109.46985 * 59.99944 * 5 2 1 27 27 H 1.09000 * 109.47373 * 299.99979 * 5 2 1 28 28 H 1.09003 * 113.61322 * 25.52181 * 8 6 5 29 29 H 1.08993 * 113.61888 * 254.61461 * 8 6 5 30 30 H 0.97004 * 119.99626 * 335.00677 * 11 9 8 31 31 H 1.08002 * 124.59099 * 0.02562 * 15 14 12 32 32 H 1.09002 * 109.47152 * 239.69566 * 18 17 16 33 33 H 0.96708 * 114.00101 * 299.99358 * 19 18 17 34 34 H 1.48501 * 109.99652 * 179.97438 * 20 18 17 35 35 H 1.48494 * 110.00064 * 301.31786 * 20 18 17 36 36 H 1.07996 * 123.45622 * 180.24837 * 21 17 16 37 37 H 1.09002 * 113.61176 * 105.45902 * 22 6 5 38 38 H 1.09000 * 113.61951 * 334.56196 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8141 0.0000 0.0000 3 8 2.2668 1.3468 0.0000 4 8 2.2667 -0.8842 -1.0162 5 6 2.1888 -0.7357 1.6152 6 6 3.7056 -0.8196 1.7978 7 1 4.2206 0.0877 1.4825 8 6 4.1319 -1.3182 3.1887 9 6 5.2299 -2.1255 2.4761 10 1 5.3809 -3.1208 2.8940 11 7 6.4823 -1.3858 2.3015 12 6 7.6470 -2.0525 2.1770 13 8 7.6582 -3.2684 2.2093 14 6 8.9053 -1.3093 2.0021 15 6 8.9744 0.0483 1.9566 16 16 10.5854 0.5664 1.7527 17 6 11.1897 -1.0809 1.7158 18 6 12.6386 -1.4599 1.5486 19 8 13.0724 -2.1999 2.6915 20 14 13.6687 0.0833 1.3803 21 6 10.1937 -1.9467 1.8615 22 6 4.3257 -2.1082 1.2324 23 1 -0.3633 0.5969 0.8366 24 1 -0.3633 0.4260 -0.9352 25 1 -0.3633 -1.0229 0.0987 26 1 1.7611 -1.7371 1.6664 27 1 1.7612 -0.1172 2.4043 28 1 3.3819 -1.9391 3.6787 29 1 4.5189 -0.5307 3.8351 30 1 6.4733 -0.4161 2.2755 31 1 8.1243 0.7087 2.0435 32 1 12.7531 -2.0725 0.6543 33 1 12.9987 -1.7152 3.5251 34 1 15.0999 -0.2769 1.2153 35 1 13.2067 0.8776 0.2138 36 1 10.3326 -3.0176 1.8734 37 1 4.8692 -1.9583 0.2995 38 1 3.6287 -2.9451 1.1875 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534690_6894386.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:35 Heat of formation + Delta-G solvation = -71.779030 kcal Electronic energy + Delta-G solvation = -23544.362520 eV Core-core repulsion = 19801.771485 eV Total energy + Delta-G solvation = -3742.591035 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.063 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.48562 -39.88542 -38.64747 -38.00943 -37.06732 -37.03466 -34.79300 -32.03419 -31.07175 -30.36259 -26.99120 -26.92177 -26.03644 -24.04093 -22.23900 -20.63510 -20.51217 -19.92850 -18.94302 -18.20413 -17.83006 -17.62663 -17.30931 -17.11674 -16.80891 -16.36115 -16.01470 -15.91110 -15.50163 -15.34199 -15.05120 -14.55923 -14.36696 -14.31045 -14.22341 -14.11776 -13.77312 -13.63927 -13.55165 -13.15950 -13.08843 -13.00612 -12.69190 -12.58739 -12.31035 -12.25555 -12.03449 -11.91473 -11.51953 -11.21348 -10.92132 -10.63207 -10.17309 -10.00883 -9.51871 -5.21240 -1.12170 -0.38144 0.31920 0.67176 0.89802 1.17585 1.54664 1.64688 1.85982 2.01421 2.33178 2.53065 2.86510 3.17691 3.21949 3.31305 3.41253 3.55139 3.59855 3.69989 3.74509 3.81440 3.89212 3.93269 4.08587 4.23777 4.26219 4.39835 4.51662 4.55365 4.55667 4.69165 4.70832 4.77915 4.92455 4.94772 5.04796 5.21151 5.47592 6.40177 6.45958 7.18199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.658 4.658 2 S 2.418 3.582 3 O -0.940 6.940 4 O -0.933 6.933 5 C -0.602 4.602 6 C -0.107 4.107 7 H 0.103 0.897 8 C -0.129 4.129 9 C 0.120 3.880 10 H 0.111 0.889 11 N -0.711 5.711 12 C 0.582 3.418 13 O -0.528 6.528 14 C -0.156 4.156 15 C -0.206 4.206 16 S 0.199 5.801 17 C -0.244 4.244 18 C -0.026 4.026 19 O -0.533 6.533 20 Si 0.654 3.346 21 C -0.052 4.052 22 C -0.151 4.151 23 H 0.128 0.872 24 H 0.130 0.870 25 H 0.129 0.871 26 H 0.136 0.864 27 H 0.136 0.864 28 H 0.103 0.897 29 H 0.080 0.920 30 H 0.400 0.600 31 H 0.171 0.829 32 H 0.124 0.876 33 H 0.381 0.619 34 H -0.232 1.232 35 H -0.236 1.236 36 H 0.157 0.843 37 H 0.083 0.917 38 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.498 4.392 4.771 7.367 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.600 3.400 3 O -0.937 6.937 4 O -0.931 6.931 5 C -0.730 4.730 6 C -0.126 4.126 7 H 0.122 0.878 8 C -0.169 4.169 9 C 0.015 3.985 10 H 0.129 0.871 11 N -0.363 5.363 12 C 0.368 3.632 13 O -0.405 6.405 14 C -0.175 4.175 15 C -0.344 4.344 16 S 0.465 5.535 17 C -0.361 4.361 18 C -0.139 4.139 19 O -0.339 6.339 20 Si 0.553 3.447 21 C -0.081 4.081 22 C -0.190 4.190 23 H 0.147 0.853 24 H 0.149 0.851 25 H 0.147 0.853 26 H 0.154 0.846 27 H 0.154 0.846 28 H 0.121 0.879 29 H 0.099 0.901 30 H 0.235 0.765 31 H 0.189 0.811 32 H 0.142 0.858 33 H 0.228 0.772 34 H -0.155 1.155 35 H -0.160 1.160 36 H 0.174 0.826 37 H 0.102 0.898 38 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -1.563 5.241 3.046 6.260 hybrid contribution -2.057 -1.493 0.470 2.585 sum -3.620 3.747 3.517 6.286 Atomic orbital electron populations 1.30297 1.26841 1.11644 1.11985 1.07949 0.78328 0.75902 0.77846 1.93612 1.79084 1.34503 1.86521 1.93627 1.78830 1.66839 1.53760 1.30312 1.04974 1.14324 1.23415 1.22366 0.90752 0.99925 0.99581 0.87840 1.23347 0.97874 1.00234 0.95405 1.21820 0.82529 0.97363 0.96809 0.87089 1.45515 1.05928 1.10036 1.74811 1.17605 0.82685 0.87005 0.75908 1.90828 1.86832 1.13269 1.49523 1.20221 0.94636 0.92152 1.10446 1.25806 1.04061 0.98766 1.05780 1.83098 0.96567 1.06160 1.67655 1.24809 1.00875 0.96574 1.13833 1.24448 0.91335 1.05733 0.92383 1.86544 1.86384 1.43988 1.16965 0.95118 0.81883 0.78933 0.88762 1.21039 0.88652 1.01374 0.97076 1.23654 0.99132 0.97073 0.99153 0.85337 0.85127 0.85275 0.84585 0.84557 0.87876 0.90113 0.76503 0.81124 0.85849 0.77150 1.15518 1.16023 0.82556 0.89813 0.88059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.08 10.62 101.05 1.07 4.15 16 2 S 2.42 -4.88 5.35 -107.50 -0.58 -5.46 16 3 O -0.94 -1.89 18.10 -57.83 -1.05 -2.93 16 4 O -0.93 -2.04 18.10 -57.83 -1.05 -3.09 16 5 C -0.60 2.83 5.65 37.16 0.21 3.04 16 6 C -0.11 0.29 3.53 -89.81 -0.32 -0.03 16 7 H 0.10 -0.29 8.13 -51.93 -0.42 -0.71 16 8 C -0.13 0.43 7.39 -25.92 -0.19 0.24 16 9 C 0.12 -0.10 4.32 -67.12 -0.29 -0.39 16 10 H 0.11 0.07 7.46 -51.93 -0.39 -0.31 16 11 N -0.71 0.29 5.23 -54.16 -0.28 0.01 16 12 C 0.58 1.60 7.79 -12.62 -0.10 1.50 16 13 O -0.53 -3.51 16.40 5.25 0.09 -3.42 16 14 C -0.16 -0.20 5.98 -104.63 -0.63 -0.83 16 15 C -0.21 0.27 10.38 29.93 0.31 0.58 16 16 S 0.20 -0.33 20.18 -107.50 -2.17 -2.50 16 17 C -0.24 0.00 5.68 -36.18 -0.21 -0.21 16 18 C -0.03 0.01 2.95 36.01 0.11 0.12 16 19 O -0.53 -0.07 12.85 -35.23 -0.45 -0.52 16 20 Si 0.65 -0.97 30.91 -169.99 -5.25 -6.22 16 21 C -0.05 -0.09 9.91 -39.02 -0.39 -0.48 16 22 C -0.15 0.14 7.43 -25.92 -0.19 -0.05 16 23 H 0.13 -0.82 8.14 -51.92 -0.42 -1.24 16 24 H 0.13 -0.56 8.14 -51.92 -0.42 -0.99 16 25 H 0.13 -0.81 8.14 -51.92 -0.42 -1.23 16 26 H 0.14 -0.91 7.85 -51.92 -0.41 -1.31 16 27 H 0.14 -0.95 8.14 -51.92 -0.42 -1.37 16 28 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 29 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 30 H 0.40 -1.22 7.20 -40.82 -0.29 -1.51 16 31 H 0.17 -0.72 7.01 -52.49 -0.37 -1.09 16 32 H 0.12 -0.01 7.96 -51.93 -0.41 -0.42 16 33 H 0.38 -1.45 8.70 45.56 0.40 -1.05 16 34 H -0.23 -0.32 7.11 56.52 0.40 0.09 16 35 H -0.24 -0.10 7.11 56.52 0.40 0.30 16 36 H 0.16 0.44 8.06 -52.49 -0.42 0.02 16 37 H 0.08 0.06 8.14 -51.93 -0.42 -0.36 16 38 H 0.10 -0.20 7.90 -51.93 -0.41 -0.61 16 LS Contribution 350.17 15.07 5.28 5.28 Total: 0.00 -13.68 350.17 -10.96 -24.64 By element: Atomic # 1 Polarization: -8.55 SS G_CDS: -4.88 Total: -13.44 kcal Atomic # 6 Polarization: 8.27 SS G_CDS: -0.61 Total: 7.66 kcal Atomic # 7 Polarization: 0.29 SS G_CDS: -0.28 Total: 0.01 kcal Atomic # 8 Polarization: -7.51 SS G_CDS: -2.46 Total: -9.97 kcal Atomic # 14 Polarization: -0.97 SS G_CDS: -5.25 Total: -6.22 kcal Atomic # 16 Polarization: -5.21 SS G_CDS: -2.74 Total: -7.95 kcal Total LS contribution 5.28 Total: 5.28 kcal Total: -13.68 -10.96 -24.64 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534690_6894386.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.141 kcal (2) G-P(sol) polarization free energy of solvation -13.682 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.823 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.956 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.638 kcal (6) G-S(sol) free energy of system = (1) + (5) -71.779 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds