Wall clock time and date at job start Tue Mar 9 2021 12:55:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52990 * 1 3 3 O 1.42899 * 109.47669 * 2 1 4 4 C 1.35900 * 116.99805 * 275.32705 * 3 2 1 5 5 C 1.38730 * 120.06008 * 5.07896 * 4 3 2 6 6 C 1.38146 * 119.94850 * 179.74582 * 5 4 3 7 7 C 1.38272 * 120.05120 * 0.50894 * 6 5 4 8 8 C 1.50700 * 119.94030 * 179.74617 * 7 6 5 9 9 O 1.42899 * 109.46936 * 245.02098 * 8 7 6 10 10 Si 1.86299 * 109.47236 * 5.01983 * 8 7 6 11 11 C 1.38259 * 120.11128 * 359.76454 * 7 6 5 12 12 C 1.38150 * 120.05858 * 359.97438 * 11 7 6 13 13 C 1.50706 * 109.47418 * 119.99976 * 2 1 3 14 14 O 1.21274 * 119.99993 * 245.00569 * 13 2 1 15 15 N 1.34778 * 119.99399 * 64.99636 * 13 2 1 16 16 C 1.46501 * 119.99256 * 180.02562 * 15 13 2 17 17 H 1.08998 * 112.85335 * 23.80331 * 16 15 13 18 18 C 1.53789 * 113.61207 * 155.00093 * 16 15 13 19 19 C 1.53777 * 87.08176 * 139.97733 * 18 16 15 20 20 H 1.09004 * 113.61707 * 89.19735 * 19 18 16 21 21 C 1.52997 * 113.61692 * 220.01706 * 19 18 16 22 22 S 1.81405 * 109.47259 * 185.00171 * 21 19 18 23 23 C 1.81397 * 101.92193 * 180.02562 * 22 21 19 24 24 O 1.42090 * 108.57925 * 65.51158 * 22 21 19 25 25 O 1.42106 * 108.57736 * 294.48914 * 22 21 19 26 26 C 1.53783 * 113.61256 * 252.49417 * 16 15 13 27 27 H 1.08997 * 109.47365 * 180.02562 * 1 2 3 28 28 H 1.09004 * 109.47320 * 300.00116 * 1 2 3 29 29 H 1.09002 * 109.46895 * 60.00026 * 1 2 3 30 30 H 1.09004 * 109.47320 * 239.99884 * 2 1 3 31 31 H 1.08008 * 120.02301 * 359.97438 * 5 4 3 32 32 H 1.07998 * 119.97493 * 180.22721 * 6 5 4 33 33 H 1.09003 * 109.46941 * 125.02176 * 8 7 6 34 34 H 0.96704 * 114.00219 * 60.00034 * 9 8 7 35 35 H 1.48502 * 109.99763 * 180.02562 * 10 8 7 36 36 H 1.48499 * 110.00242 * 301.31939 * 10 8 7 37 37 H 1.08003 * 119.97340 * 179.97438 * 11 7 6 38 38 H 1.07995 * 120.02750 * 179.97438 * 12 11 7 39 39 H 0.96990 * 120.00432 * 0.02562 * 15 13 2 40 40 H 1.08998 * 113.61604 * 25.43212 * 18 16 15 41 41 H 1.08999 * 113.61423 * 254.52832 * 18 16 15 42 42 H 1.09005 * 109.46895 * 65.00589 * 21 19 18 43 43 H 1.08997 * 109.47051 * 305.00248 * 21 19 18 44 44 H 1.08997 * 109.47033 * 300.00381 * 23 22 21 45 45 H 1.08995 * 109.47402 * 179.97438 * 23 22 21 46 46 H 1.09008 * 109.47363 * 59.99757 * 23 22 21 47 47 H 1.08995 * 113.61352 * 105.47610 * 26 16 15 48 48 H 1.08995 * 113.61529 * 334.56999 * 26 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 8 2.0064 1.3472 0.0000 4 6 2.1061 1.9663 -1.2057 5 6 1.6544 1.3303 -2.3529 6 6 1.7521 1.9639 -3.5766 7 6 2.3091 3.2268 -3.6600 8 6 2.4197 3.9133 -4.9969 9 8 3.7982 4.0832 -5.3326 10 14 1.5869 2.8738 -6.2995 11 6 2.7651 3.8604 -2.5189 12 6 2.6648 3.2332 -1.2920 13 6 2.0323 -0.7104 1.2305 14 8 2.6529 -0.0979 2.0734 15 7 1.7918 -2.0264 1.3941 16 6 2.2797 -2.7169 2.5906 17 1 2.4403 -2.0431 3.4322 18 6 1.4673 -3.9716 2.9521 19 6 2.8065 -4.6426 3.2998 20 1 3.1117 -4.4973 4.3361 21 6 2.8940 -6.1036 2.8541 22 16 4.4496 -6.8245 3.4467 23 6 4.3408 -8.5215 2.8150 24 8 4.4172 -6.8665 4.8666 25 8 5.5294 -6.1683 2.7964 26 6 3.4646 -3.6586 2.3181 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 1.8933 -0.5139 -0.8900 31 1 1.2234 0.3421 -2.2888 32 1 1.3973 1.4707 -4.4694 33 1 1.9353 4.8884 -4.9457 34 1 4.2928 3.2545 -5.3956 35 1 1.6896 3.5398 -7.6229 36 1 2.2174 1.5306 -6.3572 37 1 3.2002 4.8466 -2.5866 38 1 3.0215 3.7285 -0.4011 39 1 1.2957 -2.5163 0.7199 40 1 0.9605 -4.4242 2.0998 41 1 0.8114 -3.8343 3.8118 42 1 2.8616 -6.1540 1.7657 43 1 2.0540 -6.6609 3.2688 44 1 3.4582 -9.0079 3.2305 45 1 5.2328 -9.0757 3.1067 46 1 4.2659 -8.5004 1.7277 47 1 4.4211 -3.2688 2.6661 48 1 3.5038 -4.0256 1.2926 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_10157680.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:59 Heat of formation + Delta-G solvation = -110.564436 kcal Electronic energy + Delta-G solvation = -30745.182081 eV Core-core repulsion = 26281.999508 eV Total energy + Delta-G solvation = -4463.182573 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.137 amu Computer time = 1.94 seconds Orbital eigenvalues (eV) -41.87224 -41.07783 -39.86528 -38.85811 -38.01880 -37.24060 -37.05196 -35.15246 -33.36369 -31.95901 -31.63390 -31.13907 -30.37165 -26.97757 -26.80289 -25.85943 -24.48406 -23.60703 -22.35214 -21.61293 -20.87471 -19.96132 -19.57651 -18.66753 -18.16437 -17.98375 -17.56963 -17.18762 -16.97245 -16.87572 -16.73290 -16.33699 -16.32498 -16.08614 -15.66660 -15.65224 -15.19369 -14.84250 -14.70639 -14.49198 -14.41838 -14.31688 -14.09691 -13.90466 -13.76215 -13.68805 -13.52757 -13.42529 -13.35097 -13.10988 -13.01960 -12.96494 -12.77379 -12.28371 -12.27799 -12.12412 -12.11638 -12.07515 -11.67795 -11.58193 -11.33687 -10.82171 -10.57826 -10.21605 -10.04882 -9.22554 -4.99477 -1.14170 0.27372 0.28679 1.27171 1.42027 1.43944 1.55396 1.63174 1.94204 2.39945 2.54280 2.63996 2.84071 3.13036 3.17805 3.30789 3.38841 3.42056 3.48470 3.53165 3.65432 3.67984 3.69128 3.72450 3.80399 3.83991 3.85375 3.99372 4.18409 4.20575 4.26808 4.38168 4.43573 4.46654 4.51259 4.52587 4.53392 4.54452 4.65776 4.72302 4.85474 4.89109 4.94397 4.99799 5.15386 5.24333 5.33305 5.49383 5.67564 6.19466 6.34992 6.41038 7.03883 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.066 3.934 3 O -0.283 6.283 4 C 0.136 3.864 5 C -0.209 4.209 6 C -0.077 4.077 7 C -0.155 4.155 8 C -0.070 4.070 9 O -0.530 6.530 10 Si 0.684 3.316 11 C -0.050 4.050 12 C -0.146 4.146 13 C 0.519 3.481 14 O -0.509 6.509 15 N -0.717 5.717 16 C 0.123 3.877 17 H 0.122 0.878 18 C -0.130 4.130 19 C -0.103 4.103 20 H 0.112 0.888 21 C -0.600 4.600 22 S 2.417 3.583 23 C -0.659 4.659 24 O -0.937 6.937 25 O -0.933 6.933 26 C -0.153 4.153 27 H 0.079 0.921 28 H 0.077 0.923 29 H 0.080 0.920 30 H 0.100 0.900 31 H 0.133 0.867 32 H 0.130 0.870 33 H 0.117 0.883 34 H 0.376 0.624 35 H -0.258 1.258 36 H -0.262 1.262 37 H 0.134 0.866 38 H 0.136 0.864 39 H 0.402 0.598 40 H 0.093 0.907 41 H 0.084 0.916 42 H 0.134 0.866 43 H 0.137 0.863 44 H 0.128 0.872 45 H 0.131 0.869 46 H 0.128 0.872 47 H 0.086 0.914 48 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.732 -6.515 -3.824 10.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.005 3.995 3 O -0.196 6.196 4 C 0.091 3.909 5 C -0.227 4.227 6 C -0.094 4.094 7 C -0.156 4.156 8 C -0.180 4.180 9 O -0.336 6.336 10 Si 0.586 3.414 11 C -0.068 4.068 12 C -0.164 4.164 13 C 0.304 3.696 14 O -0.382 6.382 15 N -0.370 5.370 16 C 0.019 3.981 17 H 0.140 0.860 18 C -0.169 4.169 19 C -0.122 4.122 20 H 0.130 0.870 21 C -0.729 4.729 22 S 2.599 3.401 23 C -0.808 4.808 24 O -0.934 6.934 25 O -0.930 6.930 26 C -0.192 4.192 27 H 0.098 0.902 28 H 0.096 0.904 29 H 0.099 0.901 30 H 0.117 0.883 31 H 0.150 0.850 32 H 0.147 0.853 33 H 0.135 0.865 34 H 0.223 0.777 35 H -0.183 1.183 36 H -0.187 1.187 37 H 0.152 0.848 38 H 0.154 0.846 39 H 0.237 0.763 40 H 0.111 0.889 41 H 0.103 0.897 42 H 0.152 0.848 43 H 0.155 0.845 44 H 0.147 0.853 45 H 0.149 0.851 46 H 0.147 0.853 47 H 0.105 0.895 48 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -6.621 -5.407 -3.261 9.150 hybrid contribution 0.177 -1.269 -0.807 1.514 sum -6.445 -6.676 -4.068 10.132 Atomic orbital electron populations 1.22355 0.92174 1.03915 1.05023 1.22205 0.96010 0.83304 0.97934 1.86237 1.80853 1.25386 1.27075 1.19091 0.95105 0.92792 0.83953 1.21194 1.07433 1.01688 0.92407 1.20827 0.97324 0.94113 0.97175 1.20180 1.03551 0.95698 0.96165 1.24957 0.87263 1.07398 0.98401 1.86606 1.20247 1.35273 1.91518 0.95092 0.90476 0.77614 0.78235 1.20870 0.95895 0.99570 0.90476 1.20550 1.03212 0.93612 0.99064 1.20138 0.79808 0.82217 0.87469 1.90783 1.38467 1.65668 1.43251 1.45814 1.58361 1.08859 1.23939 1.22545 0.94607 0.92207 0.88788 0.85990 1.23379 0.96066 0.94758 1.02703 1.22071 0.99446 0.89721 1.01008 0.87026 1.30300 1.22889 1.07133 1.12568 1.07972 0.77684 0.78195 0.76221 1.30301 1.12097 1.24921 1.13472 1.93624 1.86610 1.86230 1.26981 1.93627 1.49676 1.72537 1.77194 1.23711 0.99498 0.95958 1.00033 0.90231 0.90380 0.90128 0.88257 0.84981 0.85301 0.86470 0.77691 1.18278 1.18662 0.84800 0.84645 0.76320 0.88881 0.89704 0.84792 0.84461 0.85301 0.85071 0.85331 0.89509 0.88788 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 29. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.55 9.12 37.15 0.34 0.89 16 2 C 0.07 -0.05 2.64 -27.88 -0.07 -0.12 16 3 O -0.28 -0.77 9.34 -39.29 -0.37 -1.14 16 4 C 0.14 0.22 6.60 -39.22 -0.26 -0.04 16 5 C -0.21 0.11 8.23 -39.43 -0.32 -0.22 16 6 C -0.08 0.05 8.66 -39.60 -0.34 -0.29 16 7 C -0.16 -0.02 5.35 -104.60 -0.56 -0.58 16 8 C -0.07 0.02 2.80 36.01 0.10 0.12 16 9 O -0.53 -0.71 12.83 -35.23 -0.45 -1.16 16 10 Si 0.68 -0.85 29.88 -169.99 -5.08 -5.93 16 11 C -0.05 -0.04 9.68 -39.61 -0.38 -0.43 16 12 C -0.15 -0.25 9.99 -39.43 -0.39 -0.64 16 13 C 0.52 0.63 7.18 -10.98 -0.08 0.55 16 14 O -0.51 -3.19 16.11 -14.30 -0.23 -3.42 16 15 N -0.72 1.67 5.32 -53.01 -0.28 1.39 16 16 C 0.12 -0.21 4.24 -67.11 -0.28 -0.49 16 17 H 0.12 0.03 7.46 -51.93 -0.39 -0.36 16 18 C -0.13 0.53 7.39 -25.92 -0.19 0.34 16 19 C -0.10 0.30 3.66 -89.81 -0.33 -0.03 16 20 H 0.11 -0.27 8.13 -51.93 -0.42 -0.69 16 21 C -0.60 3.06 5.64 37.16 0.21 3.27 16 22 S 2.42 -5.02 5.35 -107.50 -0.58 -5.60 16 23 C -0.66 3.24 10.62 101.05 1.07 4.32 16 24 O -0.94 -2.13 18.10 -57.83 -1.05 -3.17 16 25 O -0.93 -1.92 18.10 -57.83 -1.05 -2.96 16 26 C -0.15 0.25 7.43 -25.92 -0.19 0.06 16 27 H 0.08 -0.45 7.92 -51.93 -0.41 -0.86 16 28 H 0.08 -0.12 8.14 -51.93 -0.42 -0.54 16 29 H 0.08 -0.28 6.91 -51.93 -0.36 -0.64 16 30 H 0.10 -0.31 6.31 -51.93 -0.33 -0.64 16 31 H 0.13 -0.40 5.43 -52.48 -0.29 -0.69 16 32 H 0.13 -0.33 4.83 -52.49 -0.25 -0.58 16 33 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 34 H 0.38 -0.53 8.70 45.56 0.40 -0.13 16 35 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 36 H -0.26 -0.12 7.00 56.52 0.40 0.27 16 37 H 0.13 0.00 8.06 -52.48 -0.42 -0.42 16 38 H 0.14 0.19 8.06 -52.49 -0.42 -0.24 16 39 H 0.40 -2.31 8.51 -40.82 -0.35 -2.66 16 40 H 0.09 -0.55 8.08 -51.93 -0.42 -0.97 16 41 H 0.08 -0.35 8.14 -51.93 -0.42 -0.77 16 42 H 0.13 -0.99 7.84 -51.92 -0.41 -1.40 16 43 H 0.14 -1.01 8.14 -51.93 -0.42 -1.43 16 44 H 0.13 -0.85 8.14 -51.93 -0.42 -1.28 16 45 H 0.13 -0.59 8.14 -51.93 -0.42 -1.01 16 46 H 0.13 -0.86 8.14 -51.92 -0.42 -1.28 16 47 H 0.09 0.02 8.14 -51.93 -0.42 -0.41 16 48 H 0.09 -0.27 7.90 -51.93 -0.41 -0.68 16 LS Contribution 407.45 15.07 6.14 6.14 Total: 0.00 -15.57 407.45 -11.68 -27.26 By element: Atomic # 1 Polarization: -11.05 SS G_CDS: -7.06 Total: -18.10 kcal Atomic # 6 Polarization: 8.40 SS G_CDS: -1.69 Total: 6.71 kcal Atomic # 7 Polarization: 1.67 SS G_CDS: -0.28 Total: 1.39 kcal Atomic # 8 Polarization: -8.72 SS G_CDS: -3.14 Total: -11.86 kcal Atomic # 14 Polarization: -0.85 SS G_CDS: -5.08 Total: -5.93 kcal Atomic # 16 Polarization: -5.02 SS G_CDS: -0.58 Total: -5.60 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -15.57 -11.68 -27.26 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_10157680.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.307 kcal (2) G-P(sol) polarization free energy of solvation -15.574 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.881 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.257 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.564 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.94 seconds