Wall clock time and date at job start Tue Mar 9 2021 12:56:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81401 * 1 3 3 O 1.42097 * 108.57643 * 2 1 4 4 O 1.42103 * 108.57433 * 228.97578 * 2 1 3 5 5 C 1.81401 * 101.91854 * 114.48867 * 2 1 3 6 6 C 1.53005 * 109.46611 * 180.02562 * 5 2 1 7 7 H 1.08993 * 112.85537 * 43.80024 * 6 5 2 8 8 C 1.53788 * 113.61221 * 175.00071 * 6 5 2 9 9 C 1.53781 * 87.08063 * 140.06040 * 8 6 5 10 10 H 1.09002 * 113.61382 * 89.19888 * 9 8 6 11 11 N 1.46498 * 113.61158 * 220.01520 * 9 8 6 12 12 C 1.34777 * 119.99828 * 204.72374 * 11 9 8 13 13 O 1.21693 * 120.00014 * 0.28042 * 12 11 9 14 14 C 1.46682 * 120.00182 * 180.27909 * 12 11 9 15 15 C 1.37870 * 126.23378 * 179.71906 * 14 12 11 16 16 C 1.39835 * 107.08110 * 179.84361 * 15 14 12 17 17 C 1.50706 * 126.06643 * 180.15358 * 16 15 14 18 18 O 1.42899 * 109.46794 * 65.33056 * 17 16 15 19 19 Si 1.86298 * 109.47365 * 185.33199 * 17 16 15 20 20 C 1.35445 * 107.86822 * 0.41752 * 16 15 14 21 21 N 1.35539 * 108.87278 * 359.74082 * 20 16 15 22 22 C 1.53782 * 87.08215 * 334.56694 * 9 8 6 23 23 H 1.09002 * 109.47181 * 305.51721 * 1 2 3 24 24 H 1.09007 * 109.47226 * 65.51240 * 1 2 3 25 25 H 1.08998 * 109.47528 * 185.50996 * 1 2 3 26 26 H 1.09004 * 109.47283 * 60.00120 * 5 2 1 27 27 H 1.08998 * 109.47236 * 299.99696 * 5 2 1 28 28 H 1.09001 * 113.61464 * 25.51240 * 8 6 5 29 29 H 1.08994 * 113.68577 * 254.62032 * 8 6 5 30 30 H 0.97001 * 120.00384 * 25.00821 * 11 9 8 31 31 H 1.07995 * 126.45998 * 359.97438 * 15 14 12 32 32 H 1.09003 * 109.47152 * 305.33433 * 17 16 15 33 33 H 0.96709 * 113.99749 * 60.00248 * 18 17 16 34 34 H 1.48500 * 110.00150 * 179.97438 * 19 17 16 35 35 H 1.48500 * 109.99782 * 301.32238 * 19 17 16 36 36 H 1.08004 * 125.56961 * 179.75563 * 20 16 15 37 37 H 0.96995 * 125.67680 * 179.97438 * 21 20 16 38 38 H 1.09002 * 113.61513 * 139.98092 * 22 9 8 39 39 H 1.08999 * 113.61337 * 270.88082 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3469 0.0000 4 8 2.2667 -0.8841 -1.0162 5 6 2.1886 -0.7357 1.6152 6 6 3.7054 -0.8184 1.7984 7 1 4.2200 0.0893 1.4834 8 6 4.1316 -1.3170 3.1894 9 6 5.2304 -2.1234 2.4771 10 1 6.1624 -1.5728 2.3488 11 7 5.4328 -3.4617 3.0375 12 6 6.6209 -4.0809 2.8912 13 8 7.5272 -3.5262 2.2980 14 6 6.8217 -5.4235 3.4469 15 6 7.9756 -6.1738 3.3683 16 6 7.7275 -7.3795 4.0318 17 6 8.7042 -8.5140 4.2052 18 8 9.7924 -8.0844 5.0259 19 14 7.8454 -9.9544 5.0167 20 6 6.4517 -7.3492 4.4857 21 7 5.8903 -6.1660 4.1368 22 6 4.3267 -2.1066 1.2330 23 1 -0.3634 0.5970 0.8365 24 1 -0.3634 0.4260 -0.9353 25 1 -0.3634 -1.0229 0.0987 26 1 1.7609 -1.7370 1.6664 27 1 1.7610 -0.1171 2.4042 28 1 3.3819 -1.9385 3.6791 29 1 4.5179 -0.5302 3.8372 30 1 4.7104 -3.9039 3.5102 31 1 8.8980 -5.8841 2.8872 32 1 9.0833 -8.8195 3.2300 33 1 9.5282 -7.7974 5.9108 34 1 8.7978 -11.0800 5.1929 35 1 7.2964 -9.5420 6.3334 36 1 5.9618 -8.1389 5.0360 37 1 4.9831 -5.8888 4.3393 38 1 4.8704 -1.9562 0.3003 39 1 3.6303 -2.9439 1.1878 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_10543058.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:03 Heat of formation + Delta-G solvation = -58.765971 kcal Electronic energy + Delta-G solvation = -23590.952585 eV Core-core repulsion = 19822.573822 eV Total energy + Delta-G solvation = -3768.378763 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 315.102 amu Computer time = 1.84 seconds Orbital eigenvalues (eV) -42.52992 -41.06680 -39.31343 -38.01582 -37.75369 -37.04929 -35.03341 -32.64320 -31.49327 -30.75251 -30.23569 -26.97335 -26.67228 -25.08031 -23.08086 -21.46649 -21.06967 -20.72849 -19.98542 -19.82734 -18.05517 -17.65383 -17.49096 -17.17730 -17.09512 -16.64852 -16.44344 -16.26959 -15.88466 -15.65301 -15.05744 -14.92960 -14.51706 -14.49613 -14.37465 -14.30789 -13.88010 -13.83192 -13.70963 -13.48900 -13.34479 -13.10580 -13.01631 -12.77527 -12.41824 -12.29030 -12.11428 -11.81465 -11.67120 -11.35360 -11.11588 -10.48408 -10.23389 -10.00085 -9.34807 -4.96744 -1.13964 0.37599 1.30996 1.50860 1.57749 1.63330 1.87906 1.98237 2.01408 2.33109 2.53290 2.84259 3.13244 3.18807 3.38438 3.49917 3.52260 3.68123 3.70861 3.71214 3.84184 3.87664 3.99194 4.01012 4.20238 4.31702 4.42882 4.51111 4.52591 4.54334 4.71099 4.73600 4.87927 4.90162 5.00958 5.03929 5.33169 5.56773 5.76903 6.16114 6.36887 6.53651 7.09033 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.419 3.581 3 O -0.937 6.937 4 O -0.933 6.933 5 C -0.600 4.600 6 C -0.102 4.102 7 H 0.112 0.888 8 C -0.131 4.131 9 C 0.124 3.876 10 H 0.124 0.876 11 N -0.723 5.723 12 C 0.591 3.409 13 O -0.521 6.521 14 C -0.059 4.059 15 C -0.074 4.074 16 C -0.208 4.208 17 C -0.041 4.041 18 O -0.530 6.530 19 Si 0.684 3.316 20 C 0.035 3.965 21 N -0.536 5.536 22 C -0.152 4.152 23 H 0.128 0.872 24 H 0.131 0.869 25 H 0.128 0.872 26 H 0.133 0.867 27 H 0.137 0.863 28 H 0.091 0.909 29 H 0.084 0.916 30 H 0.394 0.606 31 H 0.151 0.849 32 H 0.116 0.884 33 H 0.374 0.626 34 H -0.258 1.258 35 H -0.261 1.261 36 H 0.176 0.824 37 H 0.417 0.583 38 H 0.087 0.913 39 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.462 -2.684 4.578 10.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.601 3.399 3 O -0.934 6.934 4 O -0.930 6.930 5 C -0.729 4.729 6 C -0.122 4.122 7 H 0.130 0.870 8 C -0.170 4.170 9 C 0.019 3.981 10 H 0.141 0.859 11 N -0.373 5.373 12 C 0.379 3.621 13 O -0.396 6.396 14 C -0.171 4.171 15 C -0.100 4.100 16 C -0.215 4.215 17 C -0.151 4.151 18 O -0.336 6.336 19 Si 0.585 3.415 20 C -0.101 4.101 21 N -0.132 5.132 22 C -0.191 4.191 23 H 0.147 0.853 24 H 0.149 0.851 25 H 0.146 0.854 26 H 0.152 0.848 27 H 0.155 0.845 28 H 0.109 0.891 29 H 0.103 0.897 30 H 0.228 0.772 31 H 0.169 0.831 32 H 0.133 0.867 33 H 0.221 0.779 34 H -0.183 1.183 35 H -0.186 1.186 36 H 0.193 0.807 37 H 0.255 0.745 38 H 0.106 0.894 39 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -8.052 -2.560 3.643 9.201 hybrid contribution -1.127 0.395 1.788 2.150 sum -9.180 -2.165 5.431 10.883 Atomic orbital electron populations 1.30304 1.26874 1.11565 1.12048 1.07943 0.78302 0.75947 0.77755 1.93625 1.79006 1.34396 1.86417 1.93627 1.78823 1.66888 1.53643 1.30301 1.04743 1.14141 1.23715 1.22072 0.90827 1.00094 0.99217 0.86993 1.23377 0.97766 0.99916 0.95965 1.22535 0.98964 0.82853 0.93773 0.85865 1.45829 1.14243 1.18480 1.58781 1.17093 0.82446 0.83536 0.79041 1.90887 1.41787 1.65307 1.41613 1.20418 0.92216 0.95009 1.09482 1.21248 0.96938 0.92425 0.99424 1.19844 0.95273 0.98740 1.07640 1.24340 0.90431 1.00504 0.99868 1.86617 1.32879 1.85614 1.28495 0.95385 0.85146 0.77815 0.83161 1.21897 0.94663 0.89641 1.03947 1.41913 1.13361 1.14281 1.43640 1.23702 0.99185 0.96810 0.99412 0.85333 0.85065 0.85352 0.84849 0.84517 0.89100 0.89738 0.77199 0.83146 0.86655 0.77884 1.18302 1.18582 0.80750 0.74518 0.89423 0.88896 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 48. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.28 10.62 101.05 1.07 4.35 16 2 S 2.42 -5.20 5.35 -107.50 -0.58 -5.78 16 3 O -0.94 -2.10 18.10 -57.83 -1.05 -3.14 16 4 O -0.93 -1.83 18.10 -57.83 -1.05 -2.88 16 5 C -0.60 3.04 5.64 37.16 0.21 3.25 16 6 C -0.10 0.29 3.65 -89.80 -0.33 -0.04 16 7 H 0.11 -0.26 8.13 -51.93 -0.42 -0.68 16 8 C -0.13 0.50 7.39 -25.92 -0.19 0.30 16 9 C 0.12 -0.17 4.24 -67.12 -0.28 -0.45 16 10 H 0.12 0.06 7.47 -51.93 -0.39 -0.33 16 11 N -0.72 1.23 5.35 -54.32 -0.29 0.94 16 12 C 0.59 1.19 7.79 -12.85 -0.10 1.09 16 13 O -0.52 -3.30 16.48 5.20 0.09 -3.21 16 14 C -0.06 -0.04 7.06 -81.98 -0.58 -0.62 16 15 C -0.07 -0.15 10.59 -39.12 -0.41 -0.57 16 16 C -0.21 0.01 5.43 -105.02 -0.57 -0.56 16 17 C -0.04 0.01 3.02 36.01 0.11 0.12 16 18 O -0.53 -0.95 12.88 -35.23 -0.45 -1.40 16 19 Si 0.68 -1.24 30.60 -169.99 -5.20 -6.44 16 20 C 0.04 -0.09 10.45 -16.91 -0.18 -0.26 16 21 N -0.54 1.56 5.99 -9.39 -0.06 1.51 16 22 C -0.15 0.23 7.43 -25.92 -0.19 0.04 16 23 H 0.13 -0.85 8.14 -51.92 -0.42 -1.28 16 24 H 0.13 -0.60 8.14 -51.92 -0.42 -1.02 16 25 H 0.13 -0.86 8.14 -51.93 -0.42 -1.29 16 26 H 0.13 -0.98 7.85 -51.92 -0.41 -1.39 16 27 H 0.14 -0.99 8.14 -51.92 -0.42 -1.41 16 28 H 0.09 -0.51 8.08 -51.93 -0.42 -0.93 16 29 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 30 H 0.39 -1.99 7.86 -40.82 -0.32 -2.31 16 31 H 0.15 0.47 8.06 -52.49 -0.42 0.05 16 32 H 0.12 -0.04 7.96 -51.93 -0.41 -0.45 16 33 H 0.37 -0.45 8.70 45.56 0.40 -0.06 16 34 H -0.26 -0.53 7.11 56.52 0.40 -0.12 16 35 H -0.26 0.10 7.11 56.52 0.40 0.50 16 36 H 0.18 -0.92 6.21 -52.48 -0.33 -1.25 16 37 H 0.42 -2.70 8.19 -40.82 -0.33 -3.03 16 38 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 39 H 0.09 -0.25 7.90 -51.93 -0.41 -0.66 16 LS Contribution 345.62 15.07 5.21 5.21 Total: 0.00 -15.33 345.62 -10.02 -25.36 By element: Atomic # 1 Polarization: -11.60 SS G_CDS: -5.20 Total: -16.81 kcal Atomic # 6 Polarization: 8.09 SS G_CDS: -1.44 Total: 6.64 kcal Atomic # 7 Polarization: 2.79 SS G_CDS: -0.35 Total: 2.45 kcal Atomic # 8 Polarization: -8.17 SS G_CDS: -2.46 Total: -10.63 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: -5.20 Total: -6.44 kcal Atomic # 16 Polarization: -5.20 SS G_CDS: -0.58 Total: -5.78 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -15.33 -10.02 -25.36 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_10543058.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.409 kcal (2) G-P(sol) polarization free energy of solvation -15.334 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.743 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.357 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.766 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds