Wall clock time and date at job start Tue Mar 9 2021 12:57:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81401 * 1 3 3 O 1.42102 * 108.57877 * 2 1 4 4 O 1.42096 * 108.57914 * 228.97127 * 2 1 3 5 5 C 1.81406 * 101.91968 * 114.48502 * 2 1 3 6 6 C 1.53003 * 109.46857 * 179.97438 * 5 2 1 7 7 H 1.09002 * 112.85017 * 314.66745 * 6 5 2 8 8 C 1.53786 * 113.61503 * 85.86363 * 6 5 2 9 9 C 1.54049 * 86.98426 * 140.01654 * 8 6 5 10 10 H 1.09003 * 113.61268 * 89.11946 * 9 8 6 11 11 N 1.46505 * 113.69488 * 220.01078 * 9 8 6 12 12 C 1.34774 * 119.99857 * 252.53547 * 11 9 8 13 13 O 1.21571 * 120.00465 * 359.97438 * 12 11 9 14 14 C 1.47697 * 119.99889 * 180.02562 * 12 11 9 15 15 C 1.39809 * 120.15497 * 179.72036 * 14 12 11 16 16 F 1.35100 * 120.08429 * 0.02562 * 15 14 12 17 17 C 1.38307 * 119.83021 * 179.74665 * 15 14 12 18 18 C 1.38184 * 120.14632 * 0.53626 * 17 15 14 19 19 C 1.50705 * 119.84324 * 179.76590 * 18 17 15 20 20 O 1.42903 * 109.46904 * 254.97383 * 19 18 17 21 21 Si 1.86298 * 109.47123 * 14.97498 * 19 18 17 22 22 C 1.38653 * 120.31609 * 359.73791 * 18 17 15 23 23 F 1.35099 * 119.91863 * 179.97438 * 22 18 17 24 24 C 1.38075 * 120.16365 * 359.97438 * 22 18 17 25 25 C 1.53781 * 113.61337 * 183.47157 * 6 5 2 26 26 H 1.09003 * 109.47216 * 305.51191 * 1 2 3 27 27 H 1.08998 * 109.46959 * 65.51481 * 1 2 3 28 28 H 1.08997 * 109.47233 * 185.51230 * 1 2 3 29 29 H 1.09000 * 109.47164 * 60.00064 * 5 2 1 30 30 H 1.08997 * 109.47235 * 299.99803 * 5 2 1 31 31 H 1.08992 * 113.61675 * 254.61398 * 8 6 5 32 32 H 1.09000 * 113.60973 * 25.51686 * 8 6 5 33 33 H 0.96997 * 119.99602 * 72.53992 * 11 9 8 34 34 H 1.08005 * 119.92774 * 180.27384 * 17 15 14 35 35 H 1.08999 * 109.47256 * 134.97720 * 19 18 17 36 36 H 0.96703 * 113.99876 * 60.00435 * 20 19 18 37 37 H 1.48500 * 109.99844 * 180.02562 * 21 19 18 38 38 H 1.48494 * 110.00088 * 301.32040 * 21 19 18 39 39 H 1.08001 * 120.07123 * 179.97438 * 24 22 18 40 40 H 1.08999 * 113.61567 * 334.48261 * 25 6 5 41 41 H 1.08998 * 113.61196 * 105.38615 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3470 0.0000 4 8 2.2667 -0.8842 -1.0161 5 6 2.1887 -0.7356 1.6153 6 6 3.7055 -0.8195 1.7980 7 1 4.2175 -1.2029 0.9154 8 6 4.3301 0.4675 2.3622 9 6 5.2337 -0.4422 3.2161 10 1 6.1636 -0.7224 2.7212 11 7 5.4410 0.0479 4.5811 12 6 6.6334 0.5651 4.9375 13 8 7.5371 0.6246 4.1266 14 6 6.8425 1.0586 6.3138 15 6 8.0799 1.5904 6.6888 16 9 9.0888 1.6551 5.7926 17 6 8.2667 2.0555 7.9778 18 6 7.2373 1.9852 8.8970 19 6 7.4501 2.4891 10.3013 20 8 7.5938 1.3786 11.1891 21 14 8.9912 3.5342 10.3592 22 6 6.0094 1.4537 8.5333 23 9 5.0087 1.3883 9.4386 24 6 5.8069 0.9911 7.2482 25 6 4.1313 -1.5086 3.1051 26 1 -0.3634 0.5970 0.8365 27 1 -0.3633 0.4259 -0.9352 28 1 -0.3633 -1.0229 0.0987 29 1 1.7610 -1.7369 1.6666 30 1 1.7610 -0.1170 2.4043 31 1 4.8732 1.0514 1.6192 32 1 3.6360 1.0686 2.9495 33 1 4.7200 0.0000 5.2282 34 1 9.2207 2.4707 8.2679 35 1 6.5925 3.0890 10.6058 36 1 8.3392 0.7999 10.9777 37 1 9.2125 4.0367 11.7390 38 1 10.1627 2.7366 9.9157 39 1 4.8500 0.5770 6.9667 40 1 3.3830 -1.4468 3.8952 41 1 4.5141 -2.5190 2.9614 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_12360598.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:30 Heat of formation + Delta-G solvation = -158.922326 kcal Electronic energy + Delta-G solvation = -29871.889511 eV Core-core repulsion = 25097.459462 eV Total energy + Delta-G solvation = -4774.430049 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.088 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -50.13418 -50.00943 -41.60843 -40.49782 -39.41399 -38.00408 -37.82071 -37.03796 -35.16999 -33.38182 -31.44725 -31.28474 -30.42491 -27.96406 -26.96452 -24.90357 -24.50552 -23.24655 -21.85952 -21.13159 -19.95183 -19.67281 -18.86158 -18.70434 -17.99098 -17.92085 -17.48893 -17.38230 -17.16838 -16.97618 -16.65657 -16.55871 -16.30816 -16.28123 -16.00026 -15.85206 -15.65504 -15.38276 -14.87316 -14.71016 -14.40271 -14.30186 -14.21941 -13.84650 -13.81582 -13.69632 -13.43233 -13.25281 -13.10024 -13.02868 -13.00503 -12.75601 -12.48650 -12.26642 -12.10293 -11.97990 -11.67540 -11.33834 -11.10805 -10.88157 -10.67666 -10.23023 -9.85783 -5.13872 -1.12647 -0.87176 -0.39142 1.00264 1.36004 1.39999 1.64535 1.77869 1.80459 2.21070 2.53765 2.72603 2.76723 2.86006 2.99851 3.08109 3.13976 3.19483 3.31233 3.37509 3.45457 3.54198 3.65840 3.69607 3.71317 3.85772 3.98797 4.03334 4.22313 4.23395 4.26422 4.41872 4.45507 4.51788 4.54560 4.56092 4.58987 4.65511 4.73089 4.90484 4.99405 5.29167 5.34284 6.15647 6.21760 6.96559 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.418 3.582 3 O -0.933 6.933 4 O -0.938 6.938 5 C -0.601 4.601 6 C -0.103 4.103 7 H 0.112 0.888 8 C -0.153 4.153 9 C 0.122 3.878 10 H 0.124 0.876 11 N -0.713 5.713 12 C 0.561 3.439 13 O -0.511 6.511 14 C -0.141 4.141 15 C 0.161 3.839 16 F -0.104 7.104 17 C -0.139 4.139 18 C -0.097 4.097 19 C -0.080 4.080 20 O -0.520 6.520 21 Si 0.696 3.304 22 C 0.111 3.889 23 F -0.121 7.121 24 C -0.094 4.094 25 C -0.131 4.131 26 H 0.128 0.872 27 H 0.131 0.869 28 H 0.128 0.872 29 H 0.137 0.863 30 H 0.134 0.866 31 H 0.087 0.913 32 H 0.094 0.906 33 H 0.401 0.599 34 H 0.159 0.841 35 H 0.127 0.873 36 H 0.378 0.622 37 H -0.249 1.249 38 H -0.254 1.254 39 H 0.151 0.849 40 H 0.092 0.908 41 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.283 -0.564 3.247 6.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.600 3.400 3 O -0.930 6.930 4 O -0.935 6.935 5 C -0.729 4.729 6 C -0.122 4.122 7 H 0.130 0.870 8 C -0.192 4.192 9 C 0.017 3.983 10 H 0.142 0.858 11 N -0.365 5.365 12 C 0.347 3.653 13 O -0.386 6.386 14 C -0.145 4.145 15 C 0.140 3.860 16 F -0.082 7.082 17 C -0.158 4.158 18 C -0.099 4.099 19 C -0.189 4.189 20 O -0.326 6.326 21 Si 0.596 3.404 22 C 0.091 3.909 23 F -0.099 7.099 24 C -0.113 4.113 25 C -0.170 4.170 26 H 0.147 0.853 27 H 0.149 0.851 28 H 0.147 0.853 29 H 0.155 0.845 30 H 0.152 0.848 31 H 0.106 0.894 32 H 0.113 0.887 33 H 0.237 0.763 34 H 0.176 0.824 35 H 0.145 0.855 36 H 0.226 0.774 37 H -0.173 1.173 38 H -0.179 1.179 39 H 0.168 0.832 40 H 0.111 0.889 41 H 0.103 0.897 Dipole moment (debyes) X Y Z Total from point charges -3.784 0.146 2.607 4.597 hybrid contribution -1.122 -1.559 1.166 2.246 sum -4.906 -1.413 3.772 6.348 Atomic orbital electron populations 1.30302 1.26852 1.11607 1.12032 1.07952 0.78317 0.76004 0.77725 1.93626 1.78824 1.34192 1.86359 1.93624 1.79008 1.67081 1.53759 1.30302 1.04739 1.14214 1.23669 1.22077 0.90846 0.99335 0.99981 0.86969 1.23758 0.99179 0.96283 0.99937 1.22630 0.99015 0.94718 0.81895 0.85836 1.45825 1.13952 1.63084 1.13654 1.17869 0.82956 0.78044 0.86460 1.90901 1.41671 1.54340 1.51681 1.19887 0.93823 1.05483 0.95351 1.17495 0.84503 0.97061 0.86963 1.91661 1.57225 1.93111 1.66178 1.21079 1.00833 1.02354 0.91498 1.20426 0.92361 0.99339 0.97744 1.25112 1.13787 0.94431 0.85554 1.86690 1.53803 1.38846 1.53259 0.94719 0.74852 0.85686 0.85123 1.17211 0.85579 1.01196 0.86883 1.91584 1.58480 1.93952 1.65882 1.21163 0.99590 0.99351 0.91240 1.23379 0.97708 0.99151 0.96739 0.85323 0.85079 0.85321 0.84482 0.84780 0.89384 0.88723 0.76323 0.82413 0.85485 0.77394 1.17289 1.17878 0.83151 0.88905 0.89674 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.22 10.62 101.05 1.07 4.29 16 2 S 2.42 -5.10 5.36 -107.50 -0.58 -5.68 16 3 O -0.93 -1.81 18.10 -57.83 -1.05 -2.86 16 4 O -0.94 -2.11 18.10 -57.83 -1.05 -3.15 16 5 C -0.60 3.02 5.63 37.16 0.21 3.23 16 6 C -0.10 0.30 3.64 -89.80 -0.33 -0.03 16 7 H 0.11 -0.28 8.14 -51.93 -0.42 -0.70 16 8 C -0.15 0.25 7.45 -25.77 -0.19 0.06 16 9 C 0.12 -0.19 4.24 -66.97 -0.28 -0.48 16 10 H 0.12 0.01 7.46 -51.93 -0.39 -0.38 16 11 N -0.71 1.28 5.31 -53.87 -0.29 0.99 16 12 C 0.56 0.84 7.77 -12.40 -0.10 0.74 16 13 O -0.51 -2.87 14.94 5.30 0.08 -2.79 16 14 C -0.14 0.00 5.88 -104.92 -0.62 -0.62 16 15 C 0.16 0.13 7.28 -38.97 -0.28 -0.15 16 16 F -0.10 -0.36 15.55 2.25 0.04 -0.32 16 17 C -0.14 0.18 8.62 -39.58 -0.34 -0.16 16 18 C -0.10 0.14 5.27 -104.49 -0.55 -0.41 16 19 C -0.08 0.13 2.44 36.01 0.09 0.22 16 20 O -0.52 0.06 12.88 -35.23 -0.45 -0.40 16 21 Si 0.70 -1.76 30.23 -169.99 -5.14 -6.90 16 22 C 0.11 -0.11 7.23 -39.49 -0.29 -0.39 16 23 F -0.12 -0.05 16.73 2.25 0.04 -0.01 16 24 C -0.09 0.20 9.51 -39.11 -0.37 -0.17 16 25 C -0.13 0.50 7.39 -25.92 -0.19 0.31 16 26 H 0.13 -0.85 8.14 -51.92 -0.42 -1.27 16 27 H 0.13 -0.59 8.14 -51.93 -0.42 -1.01 16 28 H 0.13 -0.84 8.14 -51.93 -0.42 -1.26 16 29 H 0.14 -0.99 8.14 -51.92 -0.42 -1.41 16 30 H 0.13 -0.98 7.88 -51.93 -0.41 -1.39 16 31 H 0.09 0.00 8.14 -51.93 -0.42 -0.42 16 32 H 0.09 -0.27 7.92 -51.93 -0.41 -0.68 16 33 H 0.40 -1.94 6.76 -40.82 -0.28 -2.21 16 34 H 0.16 -0.43 4.83 -52.48 -0.25 -0.68 16 35 H 0.13 -0.27 7.89 -51.93 -0.41 -0.68 16 36 H 0.38 -1.24 8.70 45.56 0.40 -0.84 16 37 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 38 H -0.25 0.27 6.68 56.52 0.38 0.64 16 39 H 0.15 -0.77 6.41 -52.49 -0.34 -1.11 16 40 H 0.09 -0.51 8.08 -51.93 -0.42 -0.93 16 41 H 0.08 -0.33 8.14 -51.93 -0.42 -0.76 16 LS Contribution 366.88 15.07 5.53 5.53 Total: 0.00 -14.31 366.88 -9.73 -24.04 By element: Atomic # 1 Polarization: -10.20 SS G_CDS: -4.69 Total: -14.88 kcal Atomic # 6 Polarization: 8.61 SS G_CDS: -2.17 Total: 6.44 kcal Atomic # 7 Polarization: 1.28 SS G_CDS: -0.29 Total: 0.99 kcal Atomic # 8 Polarization: -6.74 SS G_CDS: -2.47 Total: -9.21 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.07 Total: -0.33 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.14 Total: -6.90 kcal Atomic # 16 Polarization: -5.10 SS G_CDS: -0.58 Total: -5.68 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -14.31 -9.73 -24.04 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_12360598.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -134.885 kcal (2) G-P(sol) polarization free energy of solvation -14.312 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.197 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.725 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.037 kcal (6) G-S(sol) free energy of system = (1) + (5) -158.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.51 seconds