Wall clock time and date at job start Tue Mar 9 2021 12:57:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35655 * 117.00343 * 2 1 4 4 C 1.40135 * 120.14975 * 179.97438 * 3 2 1 5 5 C 1.47537 * 120.19154 * 0.02562 * 4 3 2 6 6 O 1.21589 * 119.99872 * 359.71850 * 5 4 3 7 7 N 1.34772 * 119.99995 * 179.72390 * 5 4 3 8 8 C 1.46501 * 120.00042 * 179.97438 * 7 5 4 9 9 H 1.09000 * 112.90742 * 23.74973 * 8 7 5 10 10 C 1.53787 * 113.61128 * 154.99929 * 8 7 5 11 11 C 1.53784 * 87.07923 * 139.98386 * 10 8 7 12 12 H 1.09002 * 113.61478 * 89.11632 * 11 10 8 13 13 C 1.52994 * 113.61233 * 220.01769 * 11 10 8 14 14 S 1.81402 * 109.46949 * 184.99815 * 13 11 10 15 15 C 1.81403 * 101.92231 * 179.97438 * 14 13 11 16 16 O 1.42099 * 108.57903 * 294.48765 * 14 13 11 17 17 O 1.42101 * 108.57726 * 65.51731 * 14 13 11 18 18 C 1.53779 * 87.08045 * 334.56667 * 11 10 8 19 19 C 1.39711 * 119.61544 * 179.72596 * 4 3 2 20 20 C 1.37787 * 119.90734 * 0.25274 * 19 4 3 21 21 C 1.50699 * 119.84772 * 180.02562 * 20 19 4 22 22 O 1.42908 * 109.46763 * 299.99326 * 21 20 19 23 23 Si 1.86304 * 109.47034 * 179.97438 * 21 20 19 24 24 C 1.38543 * 120.30227 * 359.97371 * 20 19 4 25 25 C 1.38060 * 120.39021 * 0.03178 * 24 20 19 26 26 H 1.08991 * 109.47156 * 180.02562 * 1 2 3 27 27 H 1.08996 * 109.46936 * 300.00484 * 1 2 3 28 28 H 1.08999 * 109.46598 * 59.99876 * 1 2 3 29 29 H 0.97005 * 119.99829 * 359.97438 * 7 5 4 30 30 H 1.09004 * 113.61202 * 254.53139 * 10 8 7 31 31 H 1.08994 * 113.61447 * 25.43570 * 10 8 7 32 32 H 1.08994 * 109.47510 * 304.99618 * 13 11 10 33 33 H 1.09001 * 109.47575 * 65.00169 * 13 11 10 34 34 H 1.08999 * 109.46968 * 60.00351 * 15 14 13 35 35 H 1.09000 * 109.47339 * 179.97438 * 15 14 13 36 36 H 1.08994 * 109.47473 * 300.00763 * 15 14 13 37 37 H 1.09006 * 113.61307 * 270.88660 * 18 11 10 38 38 H 1.08999 * 113.69146 * 139.99146 * 18 11 10 39 39 H 1.07997 * 120.04099 * 180.27610 * 19 4 3 40 40 H 1.08994 * 109.47324 * 59.99534 * 21 20 19 41 41 H 0.96694 * 113.99818 * 300.00111 * 22 21 20 42 42 H 1.48504 * 109.99753 * 179.97438 * 23 21 20 43 43 H 1.48490 * 109.99974 * 301.31585 * 23 21 20 44 44 H 1.07999 * 119.80613 * 180.02562 * 24 20 19 45 45 H 1.07998 * 119.95681 * 179.97438 * 25 24 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2087 0.0000 4 6 3.4442 1.2856 0.0005 5 6 4.2550 0.0530 0.0005 6 8 3.7094 -1.0336 0.0052 7 7 5.6005 0.1314 -0.0046 8 6 6.4056 -1.0925 -0.0040 9 1 5.8696 -1.9532 -0.4040 10 6 7.8089 -0.9069 -0.6051 11 6 8.3257 -1.8189 0.5201 12 1 8.3145 -2.8782 0.2634 13 6 9.6605 -1.3640 1.1134 14 16 10.2358 -2.5911 2.3191 15 6 11.7985 -1.8607 2.8806 16 8 9.3273 -2.6128 3.4116 17 8 10.5235 -3.8010 1.6317 18 6 7.1031 -1.3704 1.3380 19 6 4.0669 2.5362 -0.0053 20 6 3.3040 3.6836 -0.0062 21 6 3.9771 5.0319 -0.0131 22 8 4.7967 5.1609 1.1505 23 14 2.6829 6.3720 -0.0135 24 6 1.9209 3.6033 -0.0020 25 6 1.2926 2.3740 0.0039 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8899 28 1 -0.3632 0.5139 -0.8900 29 1 6.0357 0.9984 -0.0086 30 1 7.9178 -1.3372 -1.6007 31 1 8.1789 0.1164 -0.5424 32 1 10.3973 -1.2646 0.3164 33 1 9.5290 -0.4019 1.6086 34 1 11.6045 -0.8839 3.3238 35 1 12.2575 -2.5120 3.6244 36 1 12.4722 -1.7469 2.0314 37 1 7.2803 -0.4737 1.9320 38 1 6.6414 -2.1739 1.9119 39 1 5.1448 2.6035 -0.0094 40 1 4.5959 5.1245 -0.9055 41 1 4.3112 5.0886 1.9835 42 1 3.3339 7.7067 -0.0196 43 1 1.8045 6.2294 -1.2022 44 1 1.3307 4.5078 -0.0032 45 1 0.2140 2.3196 0.0076 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_12496546.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:34 Heat of formation + Delta-G solvation = -108.433749 kcal Electronic energy + Delta-G solvation = -29525.597432 eV Core-core repulsion = 25218.044872 eV Total energy + Delta-G solvation = -4307.552560 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.122 amu Computer time = 1.61 seconds Orbital eigenvalues (eV) -41.80343 -40.80110 -39.24920 -39.12798 -37.94185 -37.19354 -36.97561 -34.82598 -32.74749 -31.89291 -31.10778 -30.30326 -28.60784 -26.83988 -26.24141 -25.67607 -23.87475 -22.41719 -21.47712 -20.83191 -19.88304 -19.44895 -18.41485 -18.12681 -17.89607 -17.47351 -17.13283 -17.01761 -16.84613 -16.55174 -16.27674 -16.15169 -15.93228 -15.83781 -15.69229 -14.91240 -14.73959 -14.59797 -14.46204 -14.33678 -14.24723 -13.74020 -13.70710 -13.58223 -13.51559 -13.28768 -13.13805 -13.02755 -12.94395 -12.62905 -12.46571 -12.17588 -12.15086 -12.11656 -12.03957 -11.85032 -11.53694 -11.23098 -10.82334 -10.45948 -10.25292 -9.95631 -9.29374 -5.14009 -1.06164 -0.27171 0.16970 1.18851 1.52302 1.71093 1.84870 1.88603 2.14488 2.21183 2.61125 2.70731 2.92875 3.25759 3.29548 3.32535 3.45631 3.51423 3.58338 3.63014 3.68196 3.74911 3.81233 3.91667 3.97136 4.05044 4.10668 4.18398 4.19458 4.30589 4.31627 4.43940 4.55452 4.57630 4.59457 4.60570 4.64345 4.68558 4.84811 4.87893 5.01808 5.03658 5.17567 5.20925 5.47046 5.55878 6.27453 6.46096 6.55865 7.34702 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.562 3.438 6 O -0.514 6.514 7 N -0.721 5.721 8 C 0.125 3.875 9 H 0.121 0.879 10 C -0.131 4.131 11 C -0.103 4.103 12 H 0.111 0.889 13 C -0.600 4.600 14 S 2.419 3.581 15 C -0.659 4.659 16 O -0.933 6.933 17 O -0.939 6.939 18 C -0.152 4.152 19 C -0.020 4.020 20 C -0.169 4.169 21 C -0.062 4.062 22 O -0.541 6.541 23 Si 0.686 3.314 24 C -0.048 4.048 25 C -0.214 4.214 26 H 0.105 0.895 27 H 0.059 0.941 28 H 0.058 0.942 29 H 0.399 0.601 30 H 0.083 0.917 31 H 0.091 0.909 32 H 0.136 0.864 33 H 0.134 0.866 34 H 0.128 0.872 35 H 0.130 0.870 36 H 0.128 0.872 37 H 0.093 0.907 38 H 0.085 0.915 39 H 0.135 0.865 40 H 0.114 0.886 41 H 0.380 0.620 42 H -0.254 1.254 43 H -0.258 1.258 44 H 0.134 0.866 45 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.051 6.577 0.194 6.580 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.350 3.650 6 O -0.389 6.389 7 N -0.373 5.373 8 C 0.020 3.980 9 H 0.139 0.861 10 C -0.171 4.171 11 C -0.122 4.122 12 H 0.129 0.871 13 C -0.728 4.728 14 S 2.601 3.399 15 C -0.808 4.808 16 O -0.930 6.930 17 O -0.936 6.936 18 C -0.191 4.191 19 C -0.039 4.039 20 C -0.170 4.170 21 C -0.173 4.173 22 O -0.347 6.347 23 Si 0.588 3.412 24 C -0.065 4.065 25 C -0.232 4.232 26 H 0.124 0.876 27 H 0.078 0.922 28 H 0.076 0.924 29 H 0.234 0.766 30 H 0.101 0.899 31 H 0.110 0.890 32 H 0.154 0.846 33 H 0.152 0.848 34 H 0.147 0.853 35 H 0.149 0.851 36 H 0.146 0.854 37 H 0.112 0.888 38 H 0.104 0.896 39 H 0.153 0.847 40 H 0.132 0.868 41 H 0.228 0.772 42 H -0.178 1.178 43 H -0.182 1.182 44 H 0.151 0.849 45 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -0.540 5.533 -0.411 5.575 hybrid contribution 0.861 1.074 -0.579 1.493 sum 0.321 6.607 -0.990 6.688 Atomic orbital electron populations 1.23240 0.78153 1.04801 1.01442 1.86388 1.21227 1.25165 1.86130 1.19101 0.90960 0.85082 0.90439 1.19348 0.90918 0.93907 1.13702 1.17989 0.81960 0.88674 0.76425 1.90850 1.71476 1.28595 1.47985 1.45855 1.05865 1.09314 1.76263 1.22471 0.89932 0.88947 0.96687 0.86121 1.23382 0.94603 1.00450 0.98619 1.22071 0.90682 1.01128 0.98355 0.87118 1.30293 1.07522 1.17920 1.17095 1.07929 0.77648 0.77400 0.76930 1.30303 1.22940 1.14435 1.13125 1.93624 1.61121 1.86543 1.51720 1.93621 1.84805 1.40438 1.74708 1.23701 0.95128 1.03000 0.97287 1.20946 0.99849 0.89840 0.93227 1.20115 0.93544 0.96013 1.07339 1.24951 1.01759 0.99234 0.91322 1.86492 1.37297 1.95375 1.15501 0.94754 0.80183 0.77627 0.88614 1.20995 0.93656 0.97341 0.94554 1.21240 1.00769 0.91562 1.09648 0.87632 0.92231 0.92356 0.76552 0.89873 0.89004 0.84564 0.84778 0.85335 0.85133 0.85357 0.88848 0.89610 0.84741 0.86837 0.77239 1.17839 1.18248 0.84908 0.84114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.98 8.57 -40.54 -0.35 -1.33 16 3 C 0.19 0.43 6.70 -38.70 -0.26 0.17 16 4 C -0.17 -0.35 5.89 -104.84 -0.62 -0.97 16 5 C 0.56 2.00 7.76 -12.47 -0.10 1.90 16 6 O -0.51 -3.85 14.76 -16.59 -0.24 -4.09 16 7 N -0.72 -0.14 5.30 -54.06 -0.29 -0.43 16 8 C 0.12 0.01 4.24 -67.12 -0.28 -0.28 16 9 H 0.12 0.21 7.47 -51.93 -0.39 -0.17 16 10 C -0.13 0.32 7.39 -25.91 -0.19 0.13 16 11 C -0.10 0.18 3.66 -89.81 -0.33 -0.15 16 12 H 0.11 -0.15 8.13 -51.93 -0.42 -0.57 16 13 C -0.60 2.43 5.64 37.15 0.21 2.64 16 14 S 2.42 -3.44 5.35 -107.50 -0.58 -4.02 16 15 C -0.66 2.82 10.62 101.05 1.07 3.89 16 16 O -0.93 -2.47 18.10 -57.83 -1.05 -3.52 16 17 O -0.94 -2.70 18.10 -57.83 -1.05 -3.75 16 18 C -0.15 0.04 7.43 -25.92 -0.19 -0.15 16 19 C -0.02 0.01 9.09 -39.20 -0.36 -0.35 16 20 C -0.17 0.20 5.39 -104.67 -0.56 -0.37 16 21 C -0.06 0.11 2.81 36.01 0.10 0.22 16 22 O -0.54 0.86 12.76 -35.23 -0.45 0.41 16 23 Si 0.69 -1.59 29.77 -169.99 -5.06 -6.65 16 24 C -0.05 0.07 8.66 -39.53 -0.34 -0.27 16 25 C -0.21 0.10 9.03 -39.47 -0.36 -0.25 16 26 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 27 H 0.06 -0.15 7.65 -51.93 -0.40 -0.54 16 28 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 29 H 0.40 -1.00 6.76 -40.82 -0.28 -1.27 16 30 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 31 H 0.09 -0.36 8.08 -51.93 -0.42 -0.78 16 32 H 0.14 -0.85 8.14 -51.93 -0.42 -1.28 16 33 H 0.13 -0.83 7.84 -51.92 -0.41 -1.24 16 34 H 0.13 -0.77 8.14 -51.92 -0.42 -1.19 16 35 H 0.13 -0.52 8.14 -51.92 -0.42 -0.94 16 36 H 0.13 -0.76 8.14 -51.93 -0.42 -1.18 16 37 H 0.09 -0.12 7.90 -51.93 -0.41 -0.53 16 38 H 0.09 0.11 8.14 -51.93 -0.42 -0.31 16 39 H 0.13 -0.33 6.40 -52.49 -0.34 -0.66 16 40 H 0.11 -0.19 7.96 -51.93 -0.41 -0.60 16 41 H 0.38 -1.94 8.70 45.56 0.40 -1.54 16 42 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 43 H -0.26 0.00 7.11 56.52 0.40 0.40 16 44 H 0.13 -0.48 4.85 -52.49 -0.25 -0.73 16 45 H 0.14 -0.38 6.30 -52.49 -0.33 -0.71 16 LS Contribution 383.74 15.07 5.78 5.78 Total: 0.00 -15.28 383.74 -10.70 -25.98 By element: Atomic # 1 Polarization: -9.30 SS G_CDS: -6.21 Total: -15.51 kcal Atomic # 6 Polarization: 8.34 SS G_CDS: -1.21 Total: 7.13 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.29 Total: -0.43 kcal Atomic # 8 Polarization: -9.15 SS G_CDS: -3.13 Total: -12.28 kcal Atomic # 14 Polarization: -1.59 SS G_CDS: -5.06 Total: -6.65 kcal Atomic # 16 Polarization: -3.44 SS G_CDS: -0.58 Total: -4.02 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -15.28 -10.70 -25.98 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_12496546.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.457 kcal (2) G-P(sol) polarization free energy of solvation -15.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -97.733 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.701 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.977 kcal (6) G-S(sol) free energy of system = (1) + (5) -108.434 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.61 seconds