Wall clock time and date at job start Tue Mar 9 2021 12:58:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81404 * 1 3 3 O 1.42100 * 108.57850 * 2 1 4 4 O 1.42099 * 108.57828 * 228.97605 * 2 1 3 5 5 C 1.81392 * 101.91916 * 114.48770 * 2 1 3 6 6 C 1.52999 * 109.47423 * 179.97438 * 5 2 1 7 7 H 1.09004 * 112.90379 * 316.25640 * 6 5 2 8 8 C 1.53783 * 113.61443 * 87.49842 * 6 5 2 9 9 C 1.53778 * 87.08196 * 139.98812 * 8 6 5 10 10 H 1.08999 * 113.69404 * 89.12575 * 9 8 6 11 11 N 1.46503 * 113.61654 * 220.02307 * 9 8 6 12 12 C 1.34771 * 120.00085 * 252.49603 * 11 9 8 13 13 O 1.21574 * 119.99838 * 359.97438 * 12 11 9 14 14 C 1.47716 * 120.00142 * 179.97438 * 12 11 9 15 15 C 1.39713 * 120.02457 * 179.97438 * 14 12 11 16 16 C 1.37666 * 119.97554 * 180.02562 * 15 14 12 17 17 C 1.39502 * 120.02347 * 0.02562 * 16 15 14 18 18 C 1.48276 * 119.97511 * 179.97438 * 17 16 15 19 19 C 1.39407 * 120.12874 * 179.97438 * 18 17 16 20 20 C 1.37999 * 119.87420 * 180.25876 * 19 18 17 21 21 C 1.38341 * 120.12317 * 359.43918 * 20 19 18 22 22 C 1.50703 * 119.87144 * 180.25838 * 21 20 19 23 23 O 1.42890 * 109.47331 * 245.30334 * 22 21 20 24 24 Si 1.86300 * 109.46886 * 5.30292 * 22 21 20 25 25 C 1.38333 * 120.25645 * 0.56382 * 21 20 19 26 26 C 1.37996 * 120.12923 * 359.71608 * 25 21 20 27 27 C 1.39499 * 120.05055 * 0.25045 * 17 16 15 28 28 C 1.37670 * 120.02485 * 359.48968 * 27 17 16 29 29 C 1.53777 * 113.61951 * 185.00071 * 6 5 2 30 30 H 1.09000 * 109.47337 * 305.51873 * 1 2 3 31 31 H 1.09004 * 109.46836 * 65.50959 * 1 2 3 32 32 H 1.08997 * 109.47109 * 185.50867 * 1 2 3 33 33 H 1.08997 * 109.47635 * 59.99855 * 5 2 1 34 34 H 1.09000 * 109.47336 * 299.99869 * 5 2 1 35 35 H 1.09000 * 113.61157 * 25.43894 * 8 6 5 36 36 H 1.09001 * 113.61632 * 254.53415 * 8 6 5 37 37 H 0.97003 * 119.99810 * 72.49040 * 11 9 8 38 38 H 1.07992 * 120.01153 * 0.02562 * 15 14 12 39 39 H 1.07998 * 119.98598 * 179.97438 * 16 15 14 40 40 H 1.08002 * 120.05963 * 359.97438 * 19 18 17 41 41 H 1.07998 * 119.93991 * 179.72489 * 20 19 18 42 42 H 1.09001 * 109.46734 * 125.30006 * 22 21 20 43 43 H 0.96698 * 114.00492 * 59.99980 * 23 22 21 44 44 H 1.48500 * 110.00288 * 58.68015 * 24 22 21 45 45 H 1.48498 * 109.99902 * 179.97438 * 24 22 21 46 46 H 1.08004 * 119.93400 * 179.69927 * 25 21 20 47 47 H 1.08002 * 120.06966 * 179.97438 * 26 25 21 48 48 H 1.07999 * 119.99042 * 179.72366 * 27 17 16 49 49 H 1.07996 * 120.01710 * 180.24763 * 28 27 17 50 50 H 1.09002 * 113.61591 * 105.47233 * 29 6 5 51 51 H 1.08995 * 113.61134 * 334.56291 * 29 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2668 1.3470 0.0000 4 8 2.2668 -0.8841 -1.0162 5 6 2.1887 -0.7357 1.6152 6 6 3.7054 -0.8196 1.7980 7 1 4.2210 -1.1768 0.9065 8 6 4.3248 0.4530 2.3995 9 6 5.2291 -0.4738 3.2290 10 1 6.1617 -0.7372 2.7300 11 7 5.4300 -0.0184 4.6068 12 6 6.6189 0.4945 4.9804 13 8 7.5249 0.5788 4.1741 14 6 6.8214 0.9542 6.3696 15 6 8.0539 1.4855 6.7575 16 6 8.2416 1.9132 8.0525 17 6 7.2018 1.8157 8.9774 18 6 7.4053 2.2761 10.3721 19 6 6.3683 2.1807 11.2989 20 6 6.5618 2.6157 12.5942 21 6 7.7856 3.1350 12.9766 22 6 7.9925 3.6031 14.3941 23 8 8.2106 5.0152 14.4025 24 14 6.4813 3.2021 15.4072 25 6 8.8183 3.2322 12.0614 26 6 8.6346 2.8057 10.7619 27 6 5.9726 1.2801 8.5927 28 6 5.7809 0.8567 7.2968 29 6 4.1316 -1.5418 3.0870 30 1 -0.3634 0.5970 0.8364 31 1 -0.3633 0.4260 -0.9353 32 1 -0.3633 -1.0229 0.0986 33 1 1.7610 -1.7369 1.6665 34 1 1.7610 -0.1171 2.4042 35 1 3.6273 1.0356 3.0013 36 1 4.8683 1.0588 1.6744 37 1 4.7072 -0.0859 5.2502 38 1 8.8591 1.5607 6.0418 39 1 9.1944 2.3235 8.3527 40 1 5.4138 1.7713 11.0025 41 1 5.7577 2.5464 13.3118 42 1 8.8599 3.0989 14.8202 43 1 7.4774 5.5286 14.0367 44 1 6.2251 1.7396 15.3804 45 1 6.6729 3.6580 16.8074 46 1 9.7701 3.6429 12.3643 47 1 9.4414 2.8824 10.0480 48 1 5.1697 1.2010 9.3107 49 1 4.8279 0.4458 6.9981 50 1 4.5192 -2.5462 2.9171 51 1 3.3813 -1.5044 3.8768 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_13158362.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:10 Heat of formation + Delta-G solvation = -51.539454 kcal Electronic energy + Delta-G solvation = -33287.071099 eV Core-core repulsion = 28632.225672 eV Total energy + Delta-G solvation = -4654.845427 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.138 amu Computer time = 2.42 seconds Orbital eigenvalues (eV) -41.61259 -40.97637 -40.04155 -38.95646 -37.99151 -37.56317 -37.02559 -35.06589 -34.00540 -32.68154 -31.78805 -31.39943 -30.80248 -30.24111 -27.13324 -26.92232 -25.09655 -24.72710 -23.69105 -22.65048 -22.21745 -21.41358 -20.93132 -19.93372 -19.22702 -18.50655 -18.01074 -17.75990 -17.58545 -17.16166 -16.93155 -16.85941 -16.43019 -16.30068 -16.14839 -15.97688 -15.71957 -15.51088 -15.31094 -15.02915 -14.92142 -14.80147 -14.40554 -14.39901 -14.32407 -14.27727 -14.08296 -13.80560 -13.68385 -13.60820 -13.39300 -13.22250 -13.08135 -12.99277 -12.77622 -12.71831 -12.65263 -12.23300 -12.09066 -12.07044 -12.01527 -11.70973 -11.61759 -11.30422 -10.91954 -10.80459 -10.47207 -10.14230 -10.11996 -10.06161 -9.14297 -5.10382 -1.11422 -0.73736 0.26348 0.29606 0.46182 1.22247 1.57084 1.65785 1.81836 1.91862 2.03563 2.55144 2.56196 2.87044 2.94511 3.17845 3.22749 3.31633 3.40948 3.43627 3.50356 3.55646 3.62086 3.69596 3.70433 3.74510 3.77260 3.85431 3.89968 3.95345 4.03629 4.12900 4.20260 4.24089 4.24810 4.41418 4.48953 4.53816 4.55086 4.56223 4.56826 4.60428 4.77094 4.80246 4.80940 4.93965 4.95332 5.03150 5.08111 5.11332 5.21218 5.31624 5.40825 5.43403 5.56830 5.72039 5.82232 6.40580 6.50203 7.15960 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.418 3.582 3 O -0.933 6.933 4 O -0.938 6.938 5 C -0.600 4.600 6 C -0.103 4.103 7 H 0.111 0.889 8 C -0.153 4.153 9 C 0.122 3.878 10 H 0.122 0.878 11 N -0.717 5.717 12 C 0.560 3.440 13 O -0.531 6.531 14 C -0.137 4.137 15 C -0.053 4.053 16 C -0.118 4.118 17 C -0.017 4.017 18 C -0.049 4.049 19 C -0.101 4.101 20 C -0.114 4.114 21 C -0.114 4.114 22 C -0.070 4.070 23 O -0.539 6.539 24 Si 0.686 3.314 25 C -0.090 4.090 26 C -0.104 4.104 27 C -0.119 4.119 28 C -0.082 4.082 29 C -0.131 4.131 30 H 0.128 0.872 31 H 0.131 0.869 32 H 0.128 0.872 33 H 0.137 0.863 34 H 0.134 0.866 35 H 0.093 0.907 36 H 0.086 0.914 37 H 0.400 0.600 38 H 0.140 0.860 39 H 0.134 0.866 40 H 0.131 0.869 41 H 0.130 0.870 42 H 0.114 0.886 43 H 0.379 0.621 44 H -0.257 1.257 45 H -0.254 1.254 46 H 0.129 0.871 47 H 0.130 0.870 48 H 0.134 0.866 49 H 0.128 0.872 50 H 0.084 0.916 51 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.823 -1.432 4.134 8.963 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.599 3.401 3 O -0.930 6.930 4 O -0.935 6.935 5 C -0.729 4.729 6 C -0.122 4.122 7 H 0.129 0.871 8 C -0.191 4.191 9 C 0.017 3.983 10 H 0.140 0.860 11 N -0.368 5.368 12 C 0.348 3.652 13 O -0.408 6.408 14 C -0.140 4.140 15 C -0.072 4.072 16 C -0.135 4.135 17 C -0.017 4.017 18 C -0.049 4.049 19 C -0.119 4.119 20 C -0.131 4.131 21 C -0.114 4.114 22 C -0.181 4.181 23 O -0.344 6.344 24 Si 0.588 3.412 25 C -0.108 4.108 26 C -0.122 4.122 27 C -0.136 4.136 28 C -0.101 4.101 29 C -0.170 4.170 30 H 0.147 0.853 31 H 0.149 0.851 32 H 0.147 0.853 33 H 0.155 0.845 34 H 0.152 0.848 35 H 0.112 0.888 36 H 0.105 0.895 37 H 0.236 0.764 38 H 0.158 0.842 39 H 0.152 0.848 40 H 0.149 0.851 41 H 0.147 0.853 42 H 0.131 0.869 43 H 0.227 0.773 44 H -0.182 1.182 45 H -0.179 1.179 46 H 0.147 0.853 47 H 0.148 0.852 48 H 0.151 0.849 49 H 0.145 0.855 50 H 0.102 0.898 51 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -6.363 -1.699 3.844 7.626 hybrid contribution -0.582 -0.575 0.707 1.081 sum -6.945 -2.274 4.550 8.609 Atomic orbital electron populations 1.30303 1.26868 1.11597 1.12025 1.07971 0.78324 0.76018 0.77755 1.93626 1.78816 1.34192 1.86366 1.93624 1.79007 1.67082 1.53764 1.30298 1.04791 1.14176 1.23616 1.22075 0.90791 0.99399 0.99982 0.87058 1.23705 0.99245 0.96349 0.99839 1.22528 0.98876 0.94813 0.82081 0.86020 1.45866 1.14482 1.64003 1.12473 1.18316 0.82319 0.77067 0.87510 1.90809 1.41832 1.54864 1.53325 1.19977 0.95851 1.04659 0.93495 1.21242 0.96284 0.93753 0.95939 1.21255 0.99127 1.00460 0.92700 1.18990 0.93890 0.96611 0.92251 1.18820 0.94352 0.99604 0.92144 1.21200 0.98756 0.99254 0.92652 1.20932 0.96329 0.99532 0.96318 1.20460 0.94290 1.00016 0.96662 1.25084 1.10873 0.85043 0.97070 1.86516 1.46827 1.15301 1.85789 0.94794 0.83390 0.82946 0.80075 1.20985 0.99046 0.98187 0.92571 1.21345 0.96630 0.97834 0.96385 1.21152 0.96971 0.99359 0.96153 1.21181 0.97920 0.97957 0.93013 1.23380 0.97845 0.99024 0.96763 0.85322 0.85088 0.85321 0.84497 0.84783 0.88816 0.89531 0.76375 0.84202 0.84782 0.85094 0.85277 0.86851 0.77325 1.18229 1.17896 0.85273 0.85216 0.84867 0.85461 0.89767 0.88969 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 28. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.12 10.62 101.05 1.07 4.19 16 2 S 2.42 -4.48 5.35 -107.50 -0.58 -5.05 16 3 O -0.93 -2.08 18.10 -57.83 -1.05 -3.13 16 4 O -0.94 -2.31 18.10 -57.83 -1.05 -3.35 16 5 C -0.60 2.84 5.64 37.16 0.21 3.04 16 6 C -0.10 0.25 3.66 -89.81 -0.33 -0.08 16 7 H 0.11 -0.23 8.13 -51.93 -0.42 -0.65 16 8 C -0.15 0.17 7.43 -25.92 -0.19 -0.03 16 9 C 0.12 -0.11 4.24 -67.11 -0.28 -0.40 16 10 H 0.12 0.10 7.46 -51.93 -0.39 -0.29 16 11 N -0.72 0.74 5.30 -54.00 -0.29 0.46 16 12 C 0.56 1.22 7.77 -12.39 -0.10 1.12 16 13 O -0.53 -3.23 15.93 5.30 0.08 -3.15 16 14 C -0.14 -0.11 5.88 -104.93 -0.62 -0.72 16 15 C -0.05 -0.06 9.58 -39.24 -0.38 -0.44 16 16 C -0.12 0.00 9.41 -39.32 -0.37 -0.37 16 17 C -0.02 0.00 5.88 -104.83 -0.62 -0.61 16 18 C -0.05 0.01 5.88 -104.90 -0.62 -0.60 16 19 C -0.10 0.13 9.43 -39.23 -0.37 -0.24 16 20 C -0.11 0.16 8.65 -39.63 -0.34 -0.18 16 21 C -0.11 0.06 5.36 -104.55 -0.56 -0.50 16 22 C -0.07 0.05 2.80 36.01 0.10 0.15 16 23 O -0.54 0.09 12.83 -35.23 -0.45 -0.36 16 24 Si 0.69 -1.09 29.79 -169.99 -5.06 -6.15 16 25 C -0.09 0.01 9.67 -39.64 -0.38 -0.37 16 26 C -0.10 0.03 9.43 -39.23 -0.37 -0.34 16 27 C -0.12 0.18 9.41 -39.32 -0.37 -0.19 16 28 C -0.08 0.13 9.52 -39.24 -0.37 -0.24 16 29 C -0.13 0.44 7.39 -25.92 -0.19 0.25 16 30 H 0.13 -0.84 8.14 -51.92 -0.42 -1.26 16 31 H 0.13 -0.57 8.14 -51.92 -0.42 -0.99 16 32 H 0.13 -0.83 8.14 -51.93 -0.42 -1.25 16 33 H 0.14 -0.95 8.14 -51.93 -0.42 -1.38 16 34 H 0.13 -0.94 7.84 -51.92 -0.41 -1.34 16 35 H 0.09 -0.21 7.90 -51.93 -0.41 -0.62 16 36 H 0.09 0.05 8.14 -51.93 -0.42 -0.38 16 37 H 0.40 -1.61 6.74 -40.82 -0.28 -1.88 16 38 H 0.14 0.19 7.64 -52.49 -0.40 -0.21 16 39 H 0.13 -0.23 6.19 -52.49 -0.32 -0.55 16 40 H 0.13 -0.46 6.19 -52.49 -0.33 -0.78 16 41 H 0.13 -0.44 4.89 -52.49 -0.26 -0.70 16 42 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 43 H 0.38 -1.52 8.70 45.56 0.40 -1.13 16 44 H -0.26 -0.19 7.11 56.52 0.40 0.21 16 45 H -0.25 -0.46 7.11 56.52 0.40 -0.06 16 46 H 0.13 -0.08 8.06 -52.48 -0.42 -0.50 16 47 H 0.13 -0.23 6.19 -52.49 -0.33 -0.56 16 48 H 0.13 -0.50 6.19 -52.49 -0.32 -0.82 16 49 H 0.13 -0.59 6.39 -52.49 -0.34 -0.93 16 50 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 51 H 0.09 -0.47 8.08 -51.93 -0.42 -0.89 16 LS Contribution 430.65 15.07 6.49 6.49 Total: 0.00 -15.15 430.65 -13.76 -28.91 By element: Atomic # 1 Polarization: -11.32 SS G_CDS: -6.79 Total: -18.11 kcal Atomic # 6 Polarization: 8.52 SS G_CDS: -5.07 Total: 3.44 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.29 Total: 0.46 kcal Atomic # 8 Polarization: -7.52 SS G_CDS: -2.46 Total: -9.98 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.06 Total: -6.15 kcal Atomic # 16 Polarization: -4.48 SS G_CDS: -0.58 Total: -5.05 kcal Total LS contribution 6.49 Total: 6.49 kcal Total: -15.15 -13.76 -28.91 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_13158362.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.629 kcal (2) G-P(sol) polarization free energy of solvation -15.152 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.781 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.759 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.910 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.539 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.42 seconds