Wall clock time and date at job start Tue Mar 9 2021 12:58:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81398 * 1 3 3 O 1.42105 * 108.57879 * 2 1 4 4 O 1.42097 * 108.57629 * 228.97761 * 2 1 3 5 5 C 1.81391 * 101.92304 * 114.48919 * 2 1 3 6 6 C 1.53001 * 109.47348 * 179.97438 * 5 2 1 7 7 H 1.08999 * 112.84717 * 43.80181 * 6 5 2 8 8 C 1.53782 * 113.61410 * 175.00034 * 6 5 2 9 9 C 1.53784 * 87.08117 * 139.98301 * 8 6 5 10 10 H 1.08995 * 113.61526 * 89.19665 * 9 8 6 11 11 N 1.46497 * 113.61495 * 220.02069 * 9 8 6 12 12 C 1.34777 * 119.99728 * 204.99913 * 11 9 8 13 13 O 1.21572 * 120.00367 * 359.97438 * 12 11 9 14 14 C 1.47653 * 119.99624 * 179.97438 * 12 11 9 15 15 C 1.40172 * 119.97453 * 0.02562 * 14 12 11 16 16 C 1.36353 * 120.66574 * 179.97438 * 15 14 12 17 17 C 1.39329 * 120.24065 * 359.97438 * 16 15 14 18 18 N 1.37400 * 133.25128 * 180.02562 * 17 16 15 19 19 C 1.36866 * 109.98015 * 179.97438 * 18 17 16 20 20 C 1.34187 * 109.96691 * 0.02562 * 19 18 17 21 21 C 1.50700 * 126.53882 * 179.97438 * 20 19 18 22 22 O 1.42904 * 109.47447 * 105.02228 * 21 20 19 23 23 Si 1.86297 * 109.47194 * 345.01684 * 21 20 19 24 24 C 1.40902 * 119.64090 * 0.02562 * 17 16 15 25 25 C 1.39194 * 119.97327 * 179.71962 * 14 12 11 26 26 C 1.53779 * 113.61523 * 272.49629 * 6 5 2 27 27 H 1.08999 * 109.47426 * 65.50794 * 1 2 3 28 28 H 1.08998 * 109.47096 * 185.51167 * 1 2 3 29 29 H 1.09006 * 109.47169 * 305.50874 * 1 2 3 30 30 H 1.09003 * 109.47583 * 300.00163 * 5 2 1 31 31 H 1.09003 * 109.47643 * 59.99714 * 5 2 1 32 32 H 1.09003 * 113.61149 * 254.52763 * 8 6 5 33 33 H 1.08997 * 113.61634 * 25.43159 * 8 6 5 34 34 H 0.97002 * 120.00165 * 24.98998 * 11 9 8 35 35 H 1.08000 * 119.66808 * 359.97438 * 15 14 12 36 36 H 1.08003 * 119.87967 * 180.02562 * 16 15 14 37 37 H 0.97000 * 125.00794 * 359.93266 * 18 17 16 38 38 H 1.07998 * 125.01499 * 179.97438 * 19 18 17 39 39 H 1.09005 * 109.46522 * 225.01882 * 21 20 19 40 40 H 0.96703 * 113.99472 * 299.99724 * 22 21 20 41 41 H 1.48500 * 110.00240 * 180.02562 * 23 21 20 42 42 H 1.48500 * 109.99909 * 301.32227 * 23 21 20 43 43 H 1.08001 * 120.30146 * 0.02799 * 25 14 12 44 44 H 1.09005 * 113.61537 * 334.57116 * 26 6 5 45 45 H 1.09004 * 113.61254 * 105.46641 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2667 -0.8841 -1.0162 5 6 2.1887 -0.7357 1.6151 6 6 3.7055 -0.8196 1.7978 7 1 4.2206 0.0877 1.4824 8 6 4.1318 -1.3183 3.1887 9 6 5.2284 -2.1272 2.4760 10 1 6.1613 -1.5787 2.3467 11 7 5.4284 -3.4657 3.0368 12 6 6.6170 -4.0851 2.8947 13 8 7.5229 -3.5333 2.3007 14 6 6.8188 -5.4340 3.4605 15 6 5.7737 -6.0699 4.1447 16 6 5.9444 -7.3156 4.6724 17 6 7.1648 -7.9740 4.5365 18 7 7.6233 -9.2017 4.9494 19 6 8.9222 -9.3731 4.5535 20 6 9.3446 -8.2887 3.8855 21 6 10.7113 -8.0803 3.2857 22 8 10.6360 -8.2272 1.8663 23 14 11.8928 -9.3428 3.9790 24 6 8.2231 -7.3454 3.8508 25 6 8.0446 -6.0756 3.3084 26 6 4.3236 -2.1093 1.2326 27 1 -0.3634 0.4260 -0.9352 28 1 -0.3633 -1.0229 0.0987 29 1 -0.3634 0.5969 0.8366 30 1 1.7610 -0.1172 2.4042 31 1 1.7610 -1.7370 1.6664 32 1 4.5202 -0.5309 3.8346 33 1 3.3812 -1.9379 3.6793 34 1 4.7055 -3.9062 3.5105 35 1 4.8237 -5.5682 4.2552 36 1 5.1304 -7.7940 5.1968 37 1 7.1033 -9.8508 5.4484 38 1 9.5193 -10.2512 4.7505 39 1 11.0658 -7.0786 3.5291 40 1 10.3269 -9.0965 1.5767 41 1 13.2445 -9.1476 3.3959 42 1 11.9558 -9.2213 5.4577 43 1 8.8511 -5.5912 2.7780 44 1 3.6254 -2.9452 1.1884 45 1 4.8669 -1.9605 0.2994 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_13287722.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:33 Heat of formation + Delta-G solvation = -43.734398 kcal Electronic energy + Delta-G solvation = -29569.800517 eV Core-core repulsion = 25261.857531 eV Total energy + Delta-G solvation = -4307.942986 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.118 amu Computer time = 3.05 seconds Orbital eigenvalues (eV) -42.50115 -41.19577 -39.61972 -37.95282 -37.87230 -37.35911 -36.98575 -34.83764 -33.27695 -31.55574 -30.78923 -30.56437 -30.02156 -26.84807 -26.48441 -25.43749 -23.52765 -23.38233 -21.50174 -21.05385 -20.59975 -19.88853 -19.31545 -18.40726 -17.97152 -17.57981 -17.43181 -17.13919 -17.05033 -16.72664 -16.23328 -16.16621 -15.82133 -15.68026 -15.51463 -15.16924 -14.82221 -14.77660 -14.68901 -14.36646 -14.26024 -14.05982 -13.88175 -13.76463 -13.61856 -13.51848 -13.27527 -13.04268 -12.95402 -12.76808 -12.49759 -12.28288 -12.19020 -12.16165 -12.04960 -11.87889 -11.54546 -11.24426 -10.79936 -10.78060 -10.31867 -10.01107 -9.33951 -8.84325 -5.08458 -1.07526 -0.05878 0.17091 1.30668 1.46196 1.64912 1.69787 1.95759 1.99030 2.00177 2.17613 2.60199 2.90801 2.95785 3.24830 3.28824 3.48597 3.56174 3.57650 3.64960 3.73414 3.73580 3.78605 3.80624 3.84789 3.95556 4.05816 4.08946 4.29034 4.34576 4.41185 4.48330 4.55785 4.56364 4.58505 4.63607 4.65912 4.78613 4.85799 5.00401 5.01769 5.15247 5.23812 5.36553 5.47080 5.57636 5.59056 5.96589 6.34280 6.55884 6.70000 7.33221 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.418 3.582 3 O -0.938 6.938 4 O -0.933 6.933 5 C -0.600 4.600 6 C -0.103 4.103 7 H 0.111 0.889 8 C -0.131 4.131 9 C 0.123 3.877 10 H 0.121 0.879 11 N -0.719 5.719 12 C 0.565 3.435 13 O -0.535 6.535 14 C -0.169 4.169 15 C -0.067 4.067 16 C -0.134 4.134 17 C 0.119 3.881 18 N -0.585 5.585 19 C 0.061 3.939 20 C -0.192 4.192 21 C -0.035 4.035 22 O -0.539 6.539 23 Si 0.687 3.313 24 C -0.103 4.103 25 C 0.008 3.992 26 C -0.153 4.153 27 H 0.130 0.870 28 H 0.128 0.872 29 H 0.128 0.872 30 H 0.136 0.864 31 H 0.134 0.866 32 H 0.083 0.917 33 H 0.091 0.909 34 H 0.400 0.600 35 H 0.127 0.873 36 H 0.127 0.873 37 H 0.421 0.579 38 H 0.179 0.821 39 H 0.113 0.887 40 H 0.377 0.623 41 H -0.254 1.254 42 H -0.256 1.256 43 H 0.139 0.861 44 H 0.093 0.907 45 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.913 -7.160 6.237 11.746 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.599 3.401 3 O -0.935 6.935 4 O -0.930 6.930 5 C -0.728 4.728 6 C -0.123 4.123 7 H 0.129 0.871 8 C -0.170 4.170 9 C 0.018 3.982 10 H 0.139 0.861 11 N -0.370 5.370 12 C 0.354 3.646 13 O -0.412 6.412 14 C -0.174 4.174 15 C -0.087 4.087 16 C -0.155 4.155 17 C 0.010 3.990 18 N -0.188 5.188 19 C -0.065 4.065 20 C -0.199 4.199 21 C -0.146 4.146 22 O -0.344 6.344 23 Si 0.589 3.411 24 C -0.108 4.108 25 C -0.012 4.012 26 C -0.191 4.191 27 H 0.149 0.851 28 H 0.147 0.853 29 H 0.147 0.853 30 H 0.155 0.845 31 H 0.152 0.848 32 H 0.102 0.898 33 H 0.110 0.890 34 H 0.235 0.765 35 H 0.145 0.855 36 H 0.145 0.855 37 H 0.259 0.741 38 H 0.196 0.804 39 H 0.130 0.870 40 H 0.224 0.776 41 H -0.178 1.178 42 H -0.181 1.181 43 H 0.156 0.844 44 H 0.112 0.888 45 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -4.766 -6.087 5.688 9.598 hybrid contribution -1.773 -0.261 1.255 2.188 sum -6.539 -6.348 6.943 11.457 Atomic orbital electron populations 1.30305 1.26937 1.11571 1.12003 1.07967 0.78292 0.75960 0.77833 1.93623 1.78998 1.34428 1.86464 1.93625 1.78794 1.66868 1.53708 1.30297 1.04874 1.14144 1.23526 1.22079 0.90711 1.00073 0.99414 0.87102 1.23378 0.97919 0.99881 0.95835 1.22487 0.98766 0.83262 0.93674 0.86101 1.45838 1.14585 1.18098 1.58519 1.18224 0.82161 0.85274 0.78960 1.90802 1.41877 1.66614 1.41944 1.19550 0.95759 0.95585 1.06464 1.20568 0.97809 0.94142 0.96143 1.19658 0.94919 0.95765 1.05139 1.18430 0.95348 0.86563 0.98689 1.41734 1.12031 1.15500 1.49494 1.21682 0.85088 0.99750 0.99994 1.20768 0.96731 0.94934 1.07459 1.24416 0.97119 1.08094 0.84969 1.86544 1.89557 1.39097 1.19208 0.95343 0.79585 0.86471 0.79723 1.18930 0.93566 0.95215 1.03045 1.20717 0.96018 0.91410 0.93009 1.23704 0.99276 0.96716 0.99444 0.85107 0.85338 0.85336 0.84534 0.84801 0.89847 0.89012 0.76471 0.85486 0.85467 0.74114 0.80437 0.87006 0.77648 1.17832 1.18114 0.84361 0.88850 0.89575 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 49. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 2.87 10.62 101.05 1.07 3.95 16 2 S 2.42 -3.37 5.35 -107.50 -0.57 -3.94 16 3 O -0.94 -2.73 18.10 -57.83 -1.05 -3.77 16 4 O -0.93 -2.55 18.10 -57.83 -1.05 -3.60 16 5 C -0.60 2.52 5.64 37.16 0.21 2.73 16 6 C -0.10 0.19 3.66 -89.81 -0.33 -0.14 16 7 H 0.11 -0.15 8.13 -51.93 -0.42 -0.58 16 8 C -0.13 0.35 7.39 -25.92 -0.19 0.16 16 9 C 0.12 0.00 4.24 -67.12 -0.28 -0.29 16 10 H 0.12 0.21 7.46 -51.93 -0.39 -0.17 16 11 N -0.72 0.01 5.30 -54.02 -0.29 -0.28 16 12 C 0.57 2.00 7.76 -12.42 -0.10 1.90 16 13 O -0.54 -4.06 15.93 5.30 0.08 -3.98 16 14 C -0.17 -0.40 5.87 -104.97 -0.62 -1.01 16 15 C -0.07 0.04 9.46 -39.53 -0.37 -0.34 16 16 C -0.13 0.11 10.00 -39.85 -0.40 -0.29 16 17 C 0.12 0.05 7.27 -83.96 -0.61 -0.56 16 18 N -0.59 1.30 6.05 -10.61 -0.06 1.24 16 19 C 0.06 -0.13 10.43 -16.73 -0.17 -0.31 16 20 C -0.19 -0.10 5.58 -102.69 -0.57 -0.67 16 21 C -0.03 -0.02 3.06 36.01 0.11 0.10 16 22 O -0.54 -0.69 12.88 -35.23 -0.45 -1.14 16 23 Si 0.69 -1.03 30.76 -169.99 -5.23 -6.26 16 24 C -0.10 -0.24 6.34 -105.16 -0.67 -0.91 16 25 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 26 C -0.15 0.05 7.43 -25.92 -0.19 -0.15 16 27 H 0.13 -0.52 8.14 -51.92 -0.42 -0.95 16 28 H 0.13 -0.79 8.14 -51.93 -0.42 -1.21 16 29 H 0.13 -0.78 8.14 -51.92 -0.42 -1.20 16 30 H 0.14 -0.89 8.14 -51.92 -0.42 -1.31 16 31 H 0.13 -0.86 7.84 -51.92 -0.41 -1.27 16 32 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 33 H 0.09 -0.41 8.08 -51.93 -0.42 -0.82 16 34 H 0.40 -1.23 6.73 -40.82 -0.27 -1.50 16 35 H 0.13 -0.47 6.36 -52.49 -0.33 -0.81 16 36 H 0.13 -0.43 8.06 -52.48 -0.42 -0.85 16 37 H 0.42 -2.24 8.96 -40.82 -0.37 -2.61 16 38 H 0.18 -1.04 6.35 -52.49 -0.33 -1.37 16 39 H 0.11 0.18 7.96 -51.93 -0.41 -0.23 16 40 H 0.38 -1.12 8.70 45.56 0.40 -0.72 16 41 H -0.25 -0.55 7.11 56.52 0.40 -0.15 16 42 H -0.26 -0.21 7.11 56.52 0.40 0.19 16 43 H 0.14 0.67 7.64 -52.49 -0.40 0.27 16 44 H 0.09 -0.14 7.90 -51.93 -0.41 -0.55 16 45 H 0.09 0.12 8.14 -51.93 -0.42 -0.31 16 LS Contribution 390.10 15.07 5.88 5.88 Total: 0.00 -16.69 390.10 -12.16 -28.85 By element: Atomic # 1 Polarization: -10.88 SS G_CDS: -5.93 Total: -16.81 kcal Atomic # 6 Polarization: 7.30 SS G_CDS: -3.49 Total: 3.81 kcal Atomic # 7 Polarization: 1.31 SS G_CDS: -0.35 Total: 0.96 kcal Atomic # 8 Polarization: -10.02 SS G_CDS: -2.46 Total: -12.48 kcal Atomic # 14 Polarization: -1.03 SS G_CDS: -5.23 Total: -6.26 kcal Atomic # 16 Polarization: -3.37 SS G_CDS: -0.57 Total: -3.94 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -16.69 -12.16 -28.85 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_13287722.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.886 kcal (2) G-P(sol) polarization free energy of solvation -16.693 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.155 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.848 kcal (6) G-S(sol) free energy of system = (1) + (5) -43.734 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.06 seconds