Wall clock time and date at job start Tue Mar 9 2021 12:59:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81403 * 1 3 3 O 1.42096 * 108.57830 * 2 1 4 4 O 1.42101 * 108.57504 * 228.97631 * 2 1 3 5 5 C 1.81398 * 101.91995 * 114.49056 * 2 1 3 6 6 C 1.53008 * 109.46816 * 179.97438 * 5 2 1 7 7 H 1.08996 * 112.84872 * 43.80590 * 6 5 2 8 8 C 1.53784 * 113.61084 * 174.99914 * 6 5 2 9 9 C 1.53781 * 87.07674 * 139.97948 * 8 6 5 10 10 H 1.09003 * 113.61195 * 89.20563 * 9 8 6 11 11 N 1.46499 * 113.61184 * 220.01391 * 9 8 6 12 12 C 1.34776 * 119.99942 * 203.47279 * 11 9 8 13 13 O 1.21283 * 120.00131 * 0.02562 * 12 11 9 14 14 C 1.50705 * 120.00027 * 179.97438 * 12 11 9 15 15 C 1.53537 * 109.82311 * 280.00300 * 14 12 11 16 16 C 1.53043 * 108.71550 * 179.35334 * 15 14 12 17 17 C 1.50630 * 110.09486 * 49.49702 * 16 15 14 18 18 C 1.50698 * 118.46961 * 160.00617 * 17 16 15 19 19 O 1.42905 * 109.46745 * 70.08721 * 18 17 16 20 20 Si 1.86298 * 109.47359 * 190.08452 * 18 17 16 21 21 C 1.31115 * 122.98350 * 340.10177 * 17 16 15 22 22 N 1.38927 * 121.84635 * 0.30936 * 21 17 16 23 23 C 1.53776 * 87.17558 * 334.61040 * 9 8 6 24 24 H 1.08997 * 109.47007 * 305.51379 * 1 2 3 25 25 H 1.09003 * 109.47018 * 65.51054 * 1 2 3 26 26 H 1.08996 * 109.46971 * 185.51073 * 1 2 3 27 27 H 1.08999 * 109.47050 * 59.99900 * 5 2 1 28 28 H 1.08999 * 109.47173 * 299.99524 * 5 2 1 29 29 H 1.09004 * 113.61520 * 25.43229 * 8 6 5 30 30 H 1.09000 * 113.60950 * 254.53107 * 8 6 5 31 31 H 0.96999 * 120.00272 * 23.47715 * 11 9 8 32 32 H 1.08999 * 109.81020 * 40.86680 * 14 12 11 33 33 H 1.09002 * 109.62272 * 299.17059 * 15 14 12 34 34 H 1.09001 * 109.62157 * 59.54237 * 15 14 12 35 35 H 1.08996 * 109.32810 * 169.92141 * 16 15 14 36 36 H 1.09000 * 109.32807 * 289.40742 * 16 15 14 37 37 H 1.08994 * 109.47275 * 310.09040 * 18 17 16 38 38 H 0.96695 * 114.00356 * 60.00040 * 19 18 17 39 39 H 1.48499 * 109.99551 * 58.68174 * 20 18 17 40 40 H 1.48494 * 110.00216 * 180.02562 * 20 18 17 41 41 H 1.07998 * 119.07771 * 180.34342 * 21 17 16 42 42 H 0.97003 * 120.55640 * 166.68829 * 22 21 17 43 43 H 1.09001 * 113.61232 * 139.94327 * 23 9 8 44 44 H 1.09002 * 113.61315 * 270.84393 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3469 0.0000 4 8 2.2667 -0.8841 -1.0162 5 6 2.1887 -0.7358 1.6152 6 6 3.7055 -0.8197 1.7978 7 1 4.2206 0.0877 1.4825 8 6 4.1318 -1.3183 3.1887 9 6 5.2283 -2.1273 2.4759 10 1 6.1613 -1.5788 2.3467 11 7 5.4283 -3.4658 3.0369 12 6 6.6067 -4.0979 2.8682 13 8 7.5015 -3.5585 2.2524 14 6 6.8127 -5.4746 3.4457 15 6 7.1334 -5.3683 4.9435 16 6 7.3215 -6.7788 5.5067 17 6 8.2707 -7.5609 4.6372 18 6 8.9482 -8.7731 5.2226 19 8 7.9853 -9.8120 5.4116 20 14 10.2785 -9.3634 4.0597 21 6 8.5354 -7.2339 3.3954 22 7 7.9562 -6.1257 2.7898 23 6 4.3258 -2.1096 1.2310 24 1 -0.3633 0.5970 0.8365 25 1 -0.3633 0.4260 -0.9352 26 1 -0.3633 -1.0229 0.0987 27 1 1.7610 -1.7370 1.6663 28 1 1.7611 -0.1172 2.4042 29 1 3.3812 -1.9380 3.6794 30 1 4.5202 -0.5309 3.8347 31 1 4.7128 -3.8971 3.5296 32 1 5.9137 -6.0739 3.3019 33 1 8.0493 -4.7937 5.0818 34 1 6.3101 -4.8747 5.4599 35 1 7.7227 -6.7128 6.5180 36 1 6.3577 -7.2870 5.5360 37 1 9.3941 -8.5121 6.1823 38 1 7.5474 -10.0953 4.5974 39 1 11.2690 -8.2811 3.8299 40 1 10.9538 -10.5589 4.6253 41 1 9.2225 -7.8432 2.8271 42 1 8.3006 -5.7871 1.9487 43 1 4.8706 -1.9603 0.2988 44 1 3.6283 -2.9460 1.1854 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_15413834.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:46 Heat of formation + Delta-G solvation = -86.869503 kcal Electronic energy + Delta-G solvation = -26293.716208 eV Core-core repulsion = 22341.269687 eV Total energy + Delta-G solvation = -3952.446521 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.133 amu Computer time = 2.04 seconds Orbital eigenvalues (eV) -41.65323 -40.39961 -39.13802 -38.02092 -37.30747 -37.05453 -35.08467 -33.24015 -33.02576 -31.30057 -30.44157 -27.62057 -26.98401 -25.51580 -24.41645 -23.39823 -21.78277 -21.02989 -19.96316 -19.38814 -19.07758 -18.04643 -17.98586 -17.59469 -17.19268 -16.98966 -16.71579 -16.38650 -16.28970 -15.98274 -15.72527 -15.21636 -15.14394 -14.93395 -14.43812 -14.39105 -14.31547 -14.13814 -14.00112 -13.86292 -13.70716 -13.37250 -13.11270 -13.06600 -13.02242 -12.98840 -12.78595 -12.28928 -12.13440 -12.11866 -11.98460 -11.83047 -11.67944 -11.34620 -11.30591 -10.84032 -10.22631 -10.13478 -8.50345 -4.98049 -1.14160 1.30559 1.41973 1.44087 1.62979 1.69528 1.80242 2.07627 2.50885 2.57989 2.84101 3.12773 3.17606 3.34873 3.44646 3.53476 3.60852 3.68317 3.70200 3.73675 3.79903 3.85289 3.92768 3.99458 4.20263 4.22189 4.32371 4.43812 4.50079 4.51501 4.54176 4.55529 4.65973 4.68941 4.72548 4.87604 4.93139 4.99988 5.15179 5.22787 5.33617 5.51423 6.16077 6.33314 6.74867 6.80003 7.01420 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.659 4.659 2 S 2.418 3.582 3 O -0.938 6.938 4 O -0.933 6.933 5 C -0.600 4.600 6 C -0.103 4.103 7 H 0.111 0.889 8 C -0.130 4.130 9 C 0.122 3.878 10 H 0.120 0.880 11 N -0.716 5.716 12 C 0.513 3.487 13 O -0.528 6.528 14 C 0.137 3.863 15 C -0.128 4.128 16 C -0.050 4.050 17 C -0.281 4.281 18 C -0.042 4.042 19 O -0.548 6.548 20 Si 0.665 3.335 21 C 0.146 3.854 22 N -0.732 5.732 23 C -0.152 4.152 24 H 0.128 0.872 25 H 0.131 0.869 26 H 0.128 0.872 27 H 0.134 0.866 28 H 0.137 0.863 29 H 0.093 0.907 30 H 0.084 0.916 31 H 0.403 0.597 32 H 0.092 0.908 33 H 0.075 0.925 34 H 0.078 0.922 35 H 0.072 0.928 36 H 0.069 0.931 37 H 0.104 0.896 38 H 0.375 0.625 39 H -0.260 1.260 40 H -0.258 1.258 41 H 0.134 0.866 42 H 0.410 0.590 43 H 0.085 0.915 44 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.272 -1.159 1.765 7.573 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.808 4.808 2 S 2.600 3.400 3 O -0.935 6.935 4 O -0.931 6.931 5 C -0.729 4.729 6 C -0.122 4.122 7 H 0.129 0.871 8 C -0.169 4.169 9 C 0.017 3.983 10 H 0.138 0.862 11 N -0.367 5.367 12 C 0.298 3.702 13 O -0.403 6.403 14 C 0.028 3.972 15 C -0.167 4.167 16 C -0.088 4.088 17 C -0.291 4.291 18 C -0.154 4.154 19 O -0.353 6.353 20 Si 0.568 3.432 21 C 0.025 3.975 22 N -0.365 5.365 23 C -0.190 4.190 24 H 0.147 0.853 25 H 0.149 0.851 26 H 0.147 0.853 27 H 0.152 0.848 28 H 0.155 0.845 29 H 0.112 0.888 30 H 0.102 0.898 31 H 0.238 0.762 32 H 0.110 0.890 33 H 0.094 0.906 34 H 0.097 0.903 35 H 0.091 0.909 36 H 0.088 0.912 37 H 0.121 0.879 38 H 0.222 0.778 39 H -0.185 1.185 40 H -0.183 1.183 41 H 0.151 0.849 42 H 0.247 0.753 43 H 0.104 0.896 44 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -5.097 -0.517 1.221 5.267 hybrid contribution -1.092 0.058 1.063 1.525 sum -6.190 -0.458 2.284 6.614 Atomic orbital electron populations 1.30299 1.26817 1.11607 1.12052 1.07954 0.78332 0.75942 0.77783 1.93624 1.79023 1.34410 1.86436 1.93624 1.78851 1.66891 1.53690 1.30300 1.04733 1.14211 1.23653 1.22101 0.90848 1.00011 0.99286 0.87101 1.23369 0.97799 0.99867 0.95904 1.22528 0.98835 0.83069 0.93903 0.86224 1.45901 1.15507 1.18225 1.57085 1.20668 0.82236 0.87621 0.79632 1.90747 1.41857 1.67042 1.40655 1.20987 0.91545 0.90782 0.93917 1.21882 1.03101 0.99029 0.92667 1.20004 0.98397 0.92293 0.98063 1.21040 1.09827 1.03433 0.94803 1.24712 0.97868 0.86993 1.05853 1.86476 1.57592 1.54325 1.36882 0.95362 0.79896 0.81107 0.86829 1.20309 0.95746 0.88733 0.92673 1.44288 1.34668 1.31005 1.26569 1.23722 0.99213 0.96883 0.99231 0.85310 0.85075 0.85312 0.84762 0.84479 0.88848 0.89780 0.76165 0.89034 0.90631 0.90341 0.90944 0.91219 0.87863 0.77849 1.18495 1.18322 0.84941 0.75319 0.89581 0.88772 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 43. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.66 3.30 10.62 101.05 1.07 4.37 16 2 S 2.42 -5.38 5.35 -107.50 -0.58 -5.95 16 3 O -0.94 -2.02 18.10 -57.83 -1.05 -3.06 16 4 O -0.93 -1.72 18.10 -57.83 -1.05 -2.76 16 5 C -0.60 3.10 5.65 37.16 0.21 3.31 16 6 C -0.10 0.31 3.66 -89.71 -0.33 -0.02 16 7 H 0.11 -0.28 8.13 -51.93 -0.42 -0.70 16 8 C -0.13 0.53 7.39 -25.92 -0.19 0.34 16 9 C 0.12 -0.24 4.21 -67.12 -0.28 -0.52 16 10 H 0.12 -0.01 7.50 -51.93 -0.39 -0.40 16 11 N -0.72 1.92 5.36 -53.02 -0.28 1.63 16 12 C 0.51 0.03 7.10 -10.98 -0.08 -0.04 16 13 O -0.53 -2.22 15.69 5.56 0.09 -2.13 16 14 C 0.14 -0.19 3.36 -68.51 -0.23 -0.42 16 15 C -0.13 0.18 5.46 -26.43 -0.14 0.04 16 16 C -0.05 0.04 5.89 -27.90 -0.16 -0.13 16 17 C -0.28 0.05 5.38 -101.13 -0.54 -0.49 16 18 C -0.04 -0.01 2.81 36.00 0.10 0.09 16 19 O -0.55 -0.35 12.88 -35.23 -0.45 -0.81 16 20 Si 0.67 -0.25 29.73 -169.99 -5.05 -5.30 16 21 C 0.15 -0.10 9.61 -16.08 -0.15 -0.25 16 22 N -0.73 0.24 5.47 -55.34 -0.30 -0.07 16 23 C -0.15 0.29 7.45 -25.83 -0.19 0.10 16 24 H 0.13 -0.86 8.14 -51.93 -0.42 -1.28 16 25 H 0.13 -0.60 8.14 -51.92 -0.42 -1.03 16 26 H 0.13 -0.87 8.14 -51.93 -0.42 -1.29 16 27 H 0.13 -0.99 7.85 -51.92 -0.41 -1.40 16 28 H 0.14 -1.00 8.14 -51.92 -0.42 -1.43 16 29 H 0.09 -0.54 8.07 -51.93 -0.42 -0.96 16 30 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 31 H 0.40 -2.25 8.71 -40.82 -0.36 -2.60 16 32 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 33 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 34 H 0.08 -0.26 8.14 -51.93 -0.42 -0.68 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 37 H 0.10 0.12 7.96 -51.93 -0.41 -0.30 16 38 H 0.37 -1.23 8.70 45.56 0.40 -0.83 16 39 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 40 H -0.26 -0.83 7.11 56.52 0.40 -0.42 16 41 H 0.13 -0.32 4.50 -52.49 -0.24 -0.56 16 42 H 0.41 0.01 8.09 -40.82 -0.33 -0.32 16 43 H 0.09 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.09 -0.29 7.90 -51.93 -0.41 -0.70 16 LS Contribution 370.42 15.07 5.58 5.58 Total: 0.00 -14.00 370.42 -10.85 -24.85 By element: Atomic # 1 Polarization: -11.51 SS G_CDS: -6.83 Total: -18.35 kcal Atomic # 6 Polarization: 7.29 SS G_CDS: -0.93 Total: 6.36 kcal Atomic # 7 Polarization: 2.15 SS G_CDS: -0.59 Total: 1.57 kcal Atomic # 8 Polarization: -6.30 SS G_CDS: -2.46 Total: -8.76 kcal Atomic # 14 Polarization: -0.25 SS G_CDS: -5.05 Total: -5.30 kcal Atomic # 16 Polarization: -5.38 SS G_CDS: -0.58 Total: -5.95 kcal Total LS contribution 5.58 Total: 5.58 kcal Total: -14.00 -10.85 -24.85 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_15413834.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -62.017 kcal (2) G-P(sol) polarization free energy of solvation -13.999 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.017 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.853 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.852 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.870 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.04 seconds