Wall clock time and date at job start Tue Mar 9 2021 13:01:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.37645 * 125.67398 * 2 1 4 4 C 1.46671 * 126.22631 * 0.02562 * 3 2 1 5 5 O 1.21699 * 119.99775 * 355.11398 * 4 3 2 6 6 N 1.34772 * 119.99873 * 175.11154 * 4 3 2 7 7 C 1.46506 * 119.99872 * 184.69570 * 6 4 3 8 8 H 1.08999 * 112.85142 * 334.66706 * 7 6 4 9 9 C 1.53776 * 113.61247 * 105.86529 * 7 6 4 10 10 C 1.53955 * 87.02109 * 139.95002 * 9 7 6 11 11 H 1.09010 * 113.61167 * 89.19402 * 10 9 7 12 12 C 1.52995 * 113.67183 * 220.06795 * 10 9 7 13 13 S 1.81399 * 109.47122 * 272.56162 * 12 10 9 14 14 C 1.81402 * 101.92416 * 179.97438 * 13 12 10 15 15 O 1.42104 * 108.57872 * 294.48523 * 13 12 10 16 16 O 1.42100 * 108.57945 * 65.50959 * 13 12 10 17 17 C 1.53779 * 113.61404 * 203.47282 * 7 6 4 18 18 C 1.37885 * 107.54473 * 180.02562 * 3 2 1 19 19 C 1.39881 * 107.09444 * 359.76474 * 18 3 2 20 20 Br 1.89098 * 126.07257 * 180.25554 * 19 18 3 21 21 C 1.35502 * 107.84974 * 0.38005 * 19 18 3 22 22 C 1.50699 * 125.56777 * 179.87288 * 21 19 18 23 23 O 1.42902 * 109.47086 * 118.86925 * 22 21 19 24 24 Si 1.86304 * 109.47378 * 238.86831 * 22 21 19 25 25 H 1.09004 * 109.46563 * 275.87408 * 1 2 3 26 26 H 1.08998 * 109.47200 * 35.87088 * 1 2 3 27 27 H 1.08999 * 109.47209 * 155.87985 * 1 2 3 28 28 H 0.97001 * 119.99971 * 4.69841 * 6 4 3 29 29 H 1.09000 * 113.61820 * 254.52725 * 9 7 6 30 30 H 1.09002 * 113.61670 * 25.43093 * 9 7 6 31 31 H 1.09006 * 109.46638 * 32.55615 * 12 10 9 32 32 H 1.08992 * 109.47701 * 152.55902 * 12 10 9 33 33 H 1.08998 * 109.47035 * 59.99382 * 14 13 12 34 34 H 1.08998 * 109.47129 * 179.97438 * 14 13 12 35 35 H 1.08999 * 109.46888 * 299.99903 * 14 13 12 36 36 H 1.08997 * 113.61348 * 334.56847 * 17 7 6 37 37 H 1.08998 * 113.61518 * 105.38505 * 17 7 6 38 38 H 1.08001 * 126.44641 * 180.02562 * 18 3 2 39 39 H 1.09007 * 109.47065 * 358.86748 * 22 21 19 40 40 H 0.96692 * 113.99923 * 59.99685 * 23 22 21 41 41 H 1.48497 * 110.00137 * 56.22746 * 24 22 21 42 42 H 1.48497 * 109.99747 * 177.55073 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2678 1.1182 0.0000 4 6 1.8121 2.5123 0.0005 5 8 0.6249 2.7644 -0.0887 6 7 2.7082 3.5141 0.0999 7 6 2.2478 4.9010 0.2041 8 1 1.2615 5.0537 -0.2341 9 6 2.3933 5.4939 1.6155 10 6 2.8420 6.7993 0.9337 11 1 2.0186 7.4729 0.6956 12 6 3.9960 7.5021 1.6515 13 16 3.3314 8.6026 2.9312 14 6 4.8439 9.3134 3.6367 15 8 2.5954 9.6404 2.2983 16 8 2.6977 7.8098 3.9258 17 6 3.2919 5.9327 -0.2543 18 6 3.5782 0.6891 -0.0006 19 6 3.5529 -0.7095 0.0045 20 35 5.0610 -1.8503 0.0130 21 6 2.2558 -1.1015 -0.0005 22 6 1.7714 -2.5285 -0.0002 23 8 0.9972 -2.7685 1.1767 24 14 0.7184 -2.8271 -1.5078 25 1 -0.3632 0.1052 1.0223 26 1 -0.3633 0.8327 -0.6022 27 1 -0.3633 -0.9379 -0.4199 28 1 3.6579 3.3168 0.1024 29 1 1.4484 5.5826 2.1515 30 1 3.1752 5.0205 2.2095 31 1 4.6438 6.7571 2.1136 32 1 4.5695 8.0862 0.9320 33 1 5.3929 9.8442 2.8589 34 1 4.5811 10.0083 4.4342 35 1 5.4665 8.5150 4.0404 36 1 4.3199 5.5795 -0.1725 37 1 3.0721 6.3740 -1.2265 38 1 4.4583 1.3151 -0.0004 39 1 2.6277 -3.2029 -0.0157 40 1 0.2174 -2.2024 1.2567 41 1 1.4835 -2.4936 -2.7360 42 1 0.2831 -4.2462 -1.5502 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534806_5000100.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:19 Heat of formation + Delta-G solvation = -49.744693 kcal Electronic energy + Delta-G solvation = -28013.228793 eV Core-core repulsion = 23749.885600 eV Total energy + Delta-G solvation = -4263.343193 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.028 amu Computer time = 2.37 seconds Orbital eigenvalues (eV) -42.92793 -41.13417 -39.40227 -37.99695 -37.91447 -37.03251 -35.31172 -34.34851 -32.34004 -31.31734 -30.89977 -30.35633 -27.49815 -27.19816 -26.95873 -24.38418 -22.88071 -21.62168 -21.29597 -20.43172 -19.93161 -18.99093 -18.16789 -17.94700 -17.59091 -17.25039 -17.16124 -16.95656 -16.60616 -16.31600 -16.00176 -15.80210 -15.55962 -14.86596 -14.70458 -14.47151 -14.40113 -14.33534 -14.29249 -14.23407 -13.87806 -13.83569 -13.67996 -13.37536 -13.30157 -13.08940 -13.00026 -12.97275 -12.76936 -12.27396 -12.26564 -12.09600 -11.91451 -11.65484 -11.34745 -11.24859 -11.01641 -10.85912 -10.23172 -9.83568 -9.27699 -5.26987 -1.11751 0.12573 0.62967 0.88774 1.18545 1.37852 1.52888 1.65380 1.81761 2.14575 2.17228 2.55216 2.86611 3.10163 3.14890 3.20119 3.34195 3.38496 3.45213 3.50865 3.61497 3.70587 3.72671 3.86454 3.87956 4.02166 4.05165 4.14793 4.23115 4.37548 4.44005 4.47239 4.50868 4.54205 4.56370 4.65626 4.74743 4.89858 5.01899 5.20310 5.37357 5.52626 5.75923 6.20979 6.29853 7.00795 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.058 3.942 2 N -0.394 5.394 3 C -0.033 4.033 4 C 0.595 3.405 5 O -0.539 6.539 6 N -0.707 5.707 7 C 0.125 3.875 8 H 0.123 0.877 9 C -0.153 4.153 10 C -0.102 4.102 11 H 0.111 0.889 12 C -0.601 4.601 13 S 2.418 3.582 14 C -0.659 4.659 15 O -0.938 6.938 16 O -0.933 6.933 17 C -0.130 4.130 18 C -0.109 4.109 19 C -0.160 4.160 20 Br -0.021 7.021 21 C 0.053 3.947 22 C -0.049 4.049 23 O -0.528 6.528 24 Si 0.668 3.332 25 H 0.094 0.906 26 H 0.117 0.883 27 H 0.086 0.914 28 H 0.405 0.595 29 H 0.086 0.914 30 H 0.094 0.906 31 H 0.134 0.866 32 H 0.137 0.863 33 H 0.128 0.872 34 H 0.130 0.870 35 H 0.128 0.872 36 H 0.093 0.907 37 H 0.085 0.915 38 H 0.156 0.844 39 H 0.137 0.863 40 H 0.373 0.627 41 H -0.244 1.244 42 H -0.236 1.236 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.840 1.947 -1.568 3.783 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.068 5.068 3 C -0.147 4.147 4 C 0.382 3.618 5 O -0.417 6.417 6 N -0.358 5.358 7 C 0.020 3.980 8 H 0.141 0.859 9 C -0.191 4.191 10 C -0.122 4.122 11 H 0.130 0.870 12 C -0.729 4.729 13 S 2.600 3.400 14 C -0.808 4.808 15 O -0.935 6.935 16 O -0.930 6.930 17 C -0.169 4.169 18 C -0.136 4.136 19 C -0.246 4.246 20 Br 0.063 6.937 21 C -0.068 4.068 22 C -0.159 4.159 23 O -0.333 6.333 24 Si 0.566 3.434 25 H 0.112 0.888 26 H 0.136 0.864 27 H 0.104 0.896 28 H 0.240 0.760 29 H 0.105 0.895 30 H 0.113 0.887 31 H 0.153 0.847 32 H 0.155 0.845 33 H 0.147 0.853 34 H 0.149 0.851 35 H 0.147 0.853 36 H 0.112 0.888 37 H 0.103 0.897 38 H 0.173 0.827 39 H 0.154 0.846 40 H 0.220 0.780 41 H -0.167 1.167 42 H -0.160 1.160 Dipole moment (debyes) X Y Z Total from point charges 1.631 1.016 -2.016 2.785 hybrid contribution 1.929 0.103 0.151 1.937 sum 3.559 1.119 -1.865 4.171 Atomic orbital electron populations 1.22547 0.75174 1.04860 1.05601 1.43684 1.06982 1.03956 1.52181 1.19970 0.89623 0.87710 1.17372 1.16845 0.85760 0.83177 0.75980 1.90825 1.16041 1.84631 1.50217 1.45587 1.09722 1.05818 1.74649 1.22561 0.99972 0.78585 0.96887 0.85890 1.23745 1.03705 0.94543 0.97131 1.22093 0.96345 0.96194 0.97566 0.87044 1.30299 1.09395 1.15777 1.17447 1.07944 0.78035 0.76793 0.77200 1.30300 1.22479 1.13991 1.14022 1.93624 1.67711 1.55812 1.76369 1.93624 1.72002 1.69860 1.57552 1.23372 0.99610 0.95453 0.98509 1.21212 0.95213 0.93003 1.04188 1.20777 0.91230 0.94386 1.18160 1.96681 1.35749 1.63035 1.98189 1.20725 0.89787 0.89856 1.06438 1.24891 1.01147 0.90703 0.99172 1.86629 1.41378 1.63178 1.42093 0.95362 0.86754 0.85401 0.75889 0.88783 0.86438 0.89585 0.75991 0.89504 0.88705 0.84733 0.84474 0.85326 0.85098 0.85313 0.88828 0.89672 0.82689 0.84599 0.77963 1.16733 1.15988 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 48. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.17 8.82 59.85 0.53 0.36 16 2 N -0.39 0.01 3.11 -115.58 -0.36 -0.35 16 3 C -0.03 -0.02 6.89 -81.98 -0.56 -0.58 16 4 C 0.59 0.47 7.77 -12.86 -0.10 0.37 16 5 O -0.54 -1.78 14.38 5.19 0.07 -1.71 16 6 N -0.71 1.36 5.35 -54.33 -0.29 1.07 16 7 C 0.12 -0.25 4.24 -67.12 -0.28 -0.54 16 8 H 0.12 -0.08 7.45 -51.93 -0.39 -0.47 16 9 C -0.15 0.29 7.45 -25.83 -0.19 0.10 16 10 C -0.10 0.32 3.66 -89.72 -0.33 -0.01 16 11 H 0.11 -0.31 8.13 -51.92 -0.42 -0.73 16 12 C -0.60 3.05 5.64 37.16 0.21 3.26 16 13 S 2.42 -5.33 5.35 -107.50 -0.58 -5.90 16 14 C -0.66 3.21 10.62 101.05 1.07 4.28 16 15 O -0.94 -1.97 18.10 -57.83 -1.05 -3.02 16 16 O -0.93 -1.75 18.10 -57.83 -1.05 -2.79 16 17 C -0.13 0.53 7.39 -25.92 -0.19 0.34 16 18 C -0.11 -0.01 10.34 -39.10 -0.40 -0.41 16 19 C -0.16 -0.24 6.53 -39.94 -0.26 -0.50 16 20 Br -0.02 -0.03 33.05 -68.01 -2.25 -2.28 16 21 C 0.05 0.05 5.23 -81.91 -0.43 -0.38 16 22 C -0.05 -0.01 2.88 36.00 0.10 0.10 16 23 O -0.53 -0.07 12.88 -35.23 -0.45 -0.53 16 24 Si 0.67 -0.66 29.65 -169.99 -5.04 -5.70 16 25 H 0.09 -0.37 8.14 -51.93 -0.42 -0.80 16 26 H 0.12 -0.23 6.56 -51.93 -0.34 -0.57 16 27 H 0.09 -0.47 3.98 -51.93 -0.21 -0.68 16 28 H 0.40 -1.74 7.61 -40.82 -0.31 -2.05 16 29 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.09 -0.26 7.90 -51.93 -0.41 -0.67 16 31 H 0.13 -0.97 7.85 -51.92 -0.41 -1.38 16 32 H 0.14 -0.99 8.14 -51.93 -0.42 -1.42 16 33 H 0.13 -0.84 8.14 -51.92 -0.42 -1.26 16 34 H 0.13 -0.59 8.14 -51.92 -0.42 -1.01 16 35 H 0.13 -0.84 8.14 -51.92 -0.42 -1.27 16 36 H 0.09 -0.52 8.07 -51.93 -0.42 -0.93 16 37 H 0.08 -0.35 8.14 -51.93 -0.42 -0.78 16 38 H 0.16 -0.41 7.45 -52.49 -0.39 -0.80 16 39 H 0.14 0.13 6.94 -51.93 -0.36 -0.23 16 40 H 0.37 -1.37 7.01 45.56 0.32 -1.05 16 41 H -0.24 -0.46 7.11 56.52 0.40 -0.06 16 42 H -0.24 -0.33 7.11 56.52 0.40 0.07 16 LS Contribution 377.56 15.07 5.69 5.69 Total: 0.00 -14.04 377.56 -11.63 -25.67 By element: Atomic # 1 Polarization: -11.04 SS G_CDS: -5.49 Total: -16.53 kcal Atomic # 6 Polarization: 7.21 SS G_CDS: -0.84 Total: 6.37 kcal Atomic # 7 Polarization: 1.38 SS G_CDS: -0.65 Total: 0.73 kcal Atomic # 8 Polarization: -5.57 SS G_CDS: -2.47 Total: -8.04 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -5.04 Total: -5.70 kcal Atomic # 16 Polarization: -5.33 SS G_CDS: -0.58 Total: -5.90 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.25 Total: -2.28 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -14.04 -11.63 -25.67 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_5000100.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -24.079 kcal (2) G-P(sol) polarization free energy of solvation -14.039 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.118 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.627 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.666 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.745 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.37 seconds