Wall clock time and date at job start Tue Mar 9 2021 13:01:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81397 * 1 3 3 O 1.42101 * 108.57947 * 2 1 4 4 O 1.42103 * 108.58250 * 228.97678 * 2 1 3 5 5 C 1.81397 * 101.92567 * 114.48484 * 2 1 3 6 6 C 1.53001 * 109.47461 * 179.97438 * 5 2 1 7 7 H 1.08999 * 112.85132 * 316.20054 * 6 5 2 8 8 C 1.53788 * 113.61135 * 87.50728 * 6 5 2 9 9 C 1.53776 * 87.08191 * 139.97926 * 8 6 5 10 10 H 1.09001 * 113.68489 * 89.12836 * 9 8 6 11 11 N 1.46494 * 113.61561 * 220.01371 * 9 8 6 12 12 C 1.34773 * 120.00500 * 252.50075 * 11 9 8 13 13 O 1.21279 * 119.99797 * 0.02562 * 12 11 9 14 14 C 1.50693 * 120.00337 * 180.02562 * 12 11 9 15 15 O 1.42895 * 109.47532 * 180.02562 * 14 12 11 16 16 C 1.35918 * 117.00285 * 180.02562 * 15 14 12 17 17 C 1.38796 * 120.05958 * 179.97438 * 16 15 14 18 18 Br 1.89097 * 120.03581 * 359.97438 * 17 16 15 19 19 C 1.38236 * 119.92599 * 179.76508 * 17 16 15 20 20 C 1.38238 * 120.04671 * 0.51316 * 19 17 16 21 21 C 1.50705 * 119.94258 * 179.76852 * 20 19 17 22 22 O 1.42894 * 109.47171 * 119.72187 * 21 20 19 23 23 Si 1.86298 * 109.46780 * 359.71628 * 21 20 19 24 24 C 1.38285 * 120.11986 * 359.48748 * 20 19 17 25 25 C 1.38147 * 120.06839 * 0.25389 * 24 20 19 26 26 C 1.53774 * 87.08114 * 334.56841 * 9 8 6 27 27 H 1.08998 * 109.46854 * 305.50765 * 1 2 3 28 28 H 1.08993 * 109.47053 * 65.51344 * 1 2 3 29 29 H 1.09005 * 109.46860 * 185.51568 * 1 2 3 30 30 H 1.09005 * 109.46628 * 60.00302 * 5 2 1 31 31 H 1.08997 * 109.47144 * 300.00609 * 5 2 1 32 32 H 1.08996 * 113.61121 * 25.42851 * 8 6 5 33 33 H 1.08998 * 113.61226 * 254.53423 * 8 6 5 34 34 H 0.97004 * 119.99850 * 72.50375 * 11 9 8 35 35 H 1.09002 * 109.47444 * 59.99844 * 14 12 11 36 36 H 1.09004 * 109.47594 * 300.00083 * 14 12 11 37 37 H 1.08005 * 119.97408 * 180.27592 * 19 17 16 38 38 H 1.09004 * 109.46779 * 239.72510 * 21 20 19 39 39 H 0.96709 * 113.99337 * 180.02562 * 22 21 20 40 40 H 1.48506 * 109.99834 * 60.00830 * 23 21 20 41 41 H 1.48502 * 110.00011 * 181.32094 * 23 21 20 42 42 H 1.07999 * 119.96801 * 180.27901 * 24 20 19 43 43 H 1.08003 * 120.02176 * 180.02562 * 25 24 20 44 44 H 1.09009 * 113.61539 * 139.97936 * 26 9 8 45 45 H 1.09006 * 113.61475 * 270.88082 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 8 2.2667 1.3470 0.0000 4 8 2.2668 -0.8841 -1.0162 5 6 2.1888 -0.7356 1.6152 6 6 3.7056 -0.8195 1.7979 7 1 4.2201 -1.1776 0.9062 8 6 4.3249 0.4532 2.3995 9 6 5.2291 -0.4736 3.2290 10 1 6.1618 -0.7368 2.7299 11 7 5.4301 -0.0181 4.6067 12 6 6.6191 0.4949 4.9803 13 8 7.5225 0.5799 4.1757 14 6 6.8259 0.9629 6.3977 15 8 8.1567 1.4620 6.5452 16 6 8.5091 1.9264 7.7730 17 6 9.7865 2.4251 7.9874 18 35 11.0394 2.4588 6.5715 19 6 10.1404 2.9012 9.2360 20 6 9.2267 2.8709 10.2729 21 6 9.6167 3.3858 11.6345 22 8 8.7581 4.4686 11.9982 23 14 11.3818 3.9800 11.5914 24 6 7.9535 2.3744 10.0615 25 6 7.5929 1.9023 8.8143 26 6 4.1318 -1.5415 3.0870 27 1 -0.3633 0.5969 0.8366 28 1 -0.3633 0.4259 -0.9352 29 1 -0.3633 -1.0230 0.0988 30 1 1.7611 -1.7369 1.6664 31 1 1.7611 -0.1171 2.4042 32 1 3.6273 1.0357 3.0012 33 1 4.8682 1.0591 1.6744 34 1 4.7074 -0.0857 5.2502 35 1 6.6725 0.1284 7.0820 36 1 6.1136 1.7558 6.6263 37 1 11.1328 3.2936 9.4025 38 1 9.5210 2.5843 12.3671 39 1 8.9523 4.8503 12.8653 40 1 11.5256 5.0730 10.5964 41 1 11.7888 4.4608 12.9362 42 1 7.2401 2.3560 10.8722 43 1 6.5981 1.5150 8.6499 44 1 4.5195 -2.5460 2.9170 45 1 3.3815 -1.5043 3.8768 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534806_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:01:29 Heat of formation + Delta-G solvation = -110.740337 kcal Electronic energy + Delta-G solvation = -30350.960493 eV Core-core repulsion = 25703.489909 eV Total energy + Delta-G solvation = -4647.470584 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 434.032 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -41.72123 -41.05444 -39.74383 -38.87186 -37.97006 -37.39632 -36.99651 -34.97625 -33.52489 -32.26003 -31.34066 -30.47679 -30.16344 -29.22417 -26.74138 -26.36130 -24.52833 -23.55816 -22.24679 -21.71584 -20.75225 -19.80260 -19.54481 -18.61468 -18.32675 -17.85581 -17.49223 -17.44383 -17.11563 -17.00167 -16.85038 -16.49828 -16.16640 -15.99404 -15.72135 -15.52039 -15.09824 -14.64783 -14.51488 -14.20958 -14.04859 -14.00007 -13.91169 -13.89049 -13.72119 -13.61197 -13.44073 -13.21858 -13.06136 -13.00135 -12.64456 -12.53293 -12.30795 -12.13928 -12.02056 -11.94442 -11.92386 -11.78459 -11.49460 -11.21435 -11.11129 -10.92285 -10.51170 -10.13105 -9.99507 -9.29726 -4.96454 -0.90216 -0.02570 0.08379 0.63040 1.26715 1.42239 1.44161 1.54579 1.92069 1.92268 2.37745 2.51169 2.78230 3.11746 3.30586 3.36830 3.43291 3.50124 3.66180 3.68609 3.73659 3.79183 3.85190 4.04617 4.06221 4.07976 4.09435 4.10056 4.18376 4.33328 4.34585 4.40769 4.54349 4.66141 4.73118 4.75402 4.80137 4.82690 4.95646 4.98862 5.03943 5.04863 5.17604 5.31143 5.45334 5.52325 6.06601 6.47324 6.59741 7.15846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.642 4.642 2 S 2.400 3.600 3 O -0.990 6.990 4 O -0.997 6.997 5 C -0.576 4.576 6 C -0.114 4.114 7 H 0.093 0.907 8 C -0.159 4.159 9 C 0.113 3.887 10 H 0.090 0.910 11 N -0.696 5.696 12 C 0.510 3.490 13 O -0.571 6.571 14 C 0.033 3.967 15 O -0.305 6.305 16 C 0.149 3.851 17 C -0.141 4.141 18 Br -0.050 7.050 19 C -0.058 4.058 20 C -0.114 4.114 21 C -0.064 4.064 22 O -0.554 6.554 23 Si 0.728 3.272 24 C -0.033 4.033 25 C -0.194 4.194 26 C -0.108 4.108 27 H 0.155 0.845 28 H 0.125 0.875 29 H 0.154 0.846 30 H 0.172 0.828 31 H 0.171 0.829 32 H 0.114 0.886 33 H 0.052 0.948 34 H 0.424 0.576 35 H 0.135 0.865 36 H 0.129 0.871 37 H 0.143 0.857 38 H 0.110 0.890 39 H 0.397 0.603 40 H -0.305 1.305 41 H -0.277 1.277 42 H 0.159 0.841 43 H 0.177 0.823 44 H 0.087 0.913 45 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.858 -6.194 10.620 16.402 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.794 4.794 2 S 2.590 3.410 3 O -0.987 6.987 4 O -0.994 6.994 5 C -0.708 4.708 6 C -0.134 4.134 7 H 0.111 0.889 8 C -0.198 4.198 9 C 0.008 3.992 10 H 0.108 0.892 11 N -0.350 5.350 12 C 0.296 3.704 13 O -0.449 6.449 14 C -0.045 4.045 15 O -0.218 6.218 16 C 0.101 3.899 17 C -0.221 4.221 18 Br 0.035 6.965 19 C -0.077 4.077 20 C -0.115 4.115 21 C -0.174 4.174 22 O -0.365 6.365 23 Si 0.634 3.366 24 C -0.052 4.052 25 C -0.213 4.213 26 C -0.147 4.147 27 H 0.173 0.827 28 H 0.144 0.856 29 H 0.173 0.827 30 H 0.190 0.810 31 H 0.189 0.811 32 H 0.132 0.868 33 H 0.071 0.929 34 H 0.263 0.737 35 H 0.152 0.848 36 H 0.146 0.854 37 H 0.161 0.839 38 H 0.128 0.872 39 H 0.248 0.752 40 H -0.233 1.233 41 H -0.204 1.204 42 H 0.176 0.824 43 H 0.194 0.806 44 H 0.106 0.894 45 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -8.744 -5.284 8.175 13.085 hybrid contribution -1.293 0.792 1.217 1.944 sum -10.037 -4.492 9.391 14.461 Atomic orbital electron populations 1.30128 1.22403 1.13878 1.13041 1.07961 0.79846 0.74511 0.78672 1.93557 1.80781 1.36797 1.87545 1.93551 1.81006 1.67713 1.57114 1.30116 1.03210 1.16441 1.21036 1.22100 0.92405 0.98694 1.00165 0.88891 1.23780 0.99590 0.96806 0.99622 1.22487 0.98450 0.96343 0.81963 0.89221 1.45601 1.13755 1.62846 1.12812 1.20604 0.82803 0.77279 0.89688 1.90794 1.43638 1.55496 1.54965 1.22867 0.83643 1.02980 0.94973 1.86246 1.31890 1.75599 1.28024 1.18793 0.92555 0.93499 0.85063 1.21090 0.93782 1.12365 0.94838 1.96763 1.55686 1.98019 1.45987 1.20854 1.00078 0.96775 0.89971 1.19351 0.95274 1.02653 0.94269 1.24622 1.04371 0.92825 0.95580 1.86528 1.56996 1.50629 1.42303 0.94466 0.77902 0.86262 0.77927 1.21232 0.95004 0.91829 0.97099 1.21620 1.00950 1.06497 0.92203 1.23345 0.96932 0.97902 0.96515 0.82650 0.85612 0.82749 0.80989 0.81140 0.86753 0.92887 0.73679 0.84781 0.85386 0.83948 0.87225 0.75201 1.23277 1.20387 0.82376 0.80600 0.89429 0.85400 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.64 7.43 10.62 113.37 1.20 8.63 16 2 S 2.40 -7.95 5.35 -56.49 -0.30 -8.25 16 3 O -0.99 -6.41 18.10 -127.37 -2.30 -8.72 16 4 O -1.00 -6.99 18.10 -127.37 -2.31 -9.30 16 5 C -0.58 7.12 5.64 71.98 0.41 7.53 16 6 C -0.11 0.66 3.66 -10.27 -0.04 0.63 16 7 H 0.09 -0.21 8.13 -2.39 -0.02 -0.23 16 8 C -0.16 0.37 7.43 31.12 0.23 0.60 16 9 C 0.11 -0.32 4.24 45.51 0.19 -0.13 16 10 H 0.09 0.35 7.46 -2.39 -0.02 0.34 16 11 N -0.70 4.25 5.35 -440.08 -2.36 1.89 16 12 C 0.51 1.01 7.91 87.66 0.69 1.70 16 13 O -0.57 -8.56 16.10 16.01 0.26 -8.30 16 14 C 0.03 -0.15 5.22 71.23 0.37 0.22 16 15 O -0.31 -1.70 9.00 -73.59 -0.66 -2.37 16 16 C 0.15 0.52 6.68 22.52 0.15 0.67 16 17 C -0.14 -0.92 6.24 22.40 0.14 -0.78 16 18 Br -0.05 -0.50 33.16 -20.37 -0.68 -1.17 16 19 C -0.06 -0.20 8.40 22.27 0.19 -0.01 16 20 C -0.11 -0.03 5.42 -19.85 -0.11 -0.13 16 21 C -0.06 0.19 2.81 71.24 0.20 0.39 16 22 O -0.55 0.56 12.74 -148.98 -1.90 -1.34 16 23 Si 0.73 -0.90 29.78 68.60 2.04 1.14 16 24 C -0.03 0.10 9.60 22.26 0.21 0.31 16 25 C -0.19 0.69 9.04 22.36 0.20 0.90 16 26 C -0.11 1.08 7.39 31.12 0.23 1.31 16 27 H 0.16 -2.58 8.14 -2.39 -0.02 -2.60 16 28 H 0.13 -1.20 8.14 -2.39 -0.02 -1.22 16 29 H 0.15 -2.52 8.14 -2.39 -0.02 -2.54 16 30 H 0.17 -3.22 8.14 -2.39 -0.02 -3.24 16 31 H 0.17 -3.27 7.84 -2.39 -0.02 -3.29 16 32 H 0.11 -0.79 7.90 -2.39 -0.02 -0.81 16 33 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 34 H 0.42 -6.52 8.73 -92.71 -0.81 -7.33 16 35 H 0.13 -1.65 7.66 -2.39 -0.02 -1.67 16 36 H 0.13 -1.44 7.66 -2.38 -0.02 -1.45 16 37 H 0.14 0.26 4.87 -2.91 -0.01 0.25 16 38 H 0.11 -0.93 7.96 -2.38 -0.02 -0.95 16 39 H 0.40 -3.44 8.74 -74.05 -0.65 -4.09 16 40 H -0.30 -2.34 7.11 99.48 0.71 -1.63 16 41 H -0.28 -0.57 7.11 99.48 0.71 0.14 16 42 H 0.16 -1.17 8.06 -2.91 -0.02 -1.19 16 43 H 0.18 -2.10 6.30 -2.91 -0.02 -2.12 16 44 H 0.09 -0.85 8.14 -2.38 -0.02 -0.87 16 45 H 0.13 -2.13 8.08 -2.38 -0.02 -2.14 16 Total: 0.00 -46.72 410.45 -4.29 -51.02 By element: Atomic # 1 Polarization: -36.08 SS G_CDS: -0.36 Total: -36.45 kcal Atomic # 6 Polarization: 17.56 SS G_CDS: 4.28 Total: 21.84 kcal Atomic # 7 Polarization: 4.25 SS G_CDS: -2.36 Total: 1.89 kcal Atomic # 8 Polarization: -23.10 SS G_CDS: -6.91 Total: -30.02 kcal Atomic # 14 Polarization: -0.90 SS G_CDS: 2.04 Total: 1.14 kcal Atomic # 16 Polarization: -7.95 SS G_CDS: -0.30 Total: -8.25 kcal Atomic # 35 Polarization: -0.50 SS G_CDS: -0.68 Total: -1.17 kcal Total: -46.72 -4.29 -51.02 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534806_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -59.724 kcal (2) G-P(sol) polarization free energy of solvation -46.725 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.449 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.291 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.016 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.740 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds