Wall clock time and date at job start Tue Mar 9 2021 13:02:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 C 1.53005 * 109.47319 * 116.23571 * 3 2 1 5 5 H 1.09007 * 112.84850 * 43.79941 * 4 3 2 6 6 C 1.53782 * 113.69142 * 272.53499 * 4 3 2 7 7 C 1.53777 * 87.07984 * 220.00438 * 6 4 3 8 8 H 1.09002 * 113.69076 * 139.99194 * 7 6 4 9 9 N 1.46504 * 113.61769 * 270.88094 * 7 6 4 10 10 C 1.34767 * 120.00038 * 252.50337 * 9 7 6 11 11 O 1.21689 * 120.00336 * 359.97438 * 10 9 7 12 12 C 1.46684 * 120.00109 * 179.97438 * 10 9 7 13 13 C 1.37870 * 126.23813 * 180.20001 * 12 10 9 14 14 C 1.39828 * 107.08722 * 180.23386 * 13 12 10 15 15 C 1.50702 * 126.06871 * 179.75727 * 14 13 12 16 16 O 1.42898 * 109.47181 * 300.02449 * 15 14 13 17 17 Si 1.86303 * 109.47232 * 180.02562 * 15 14 13 18 18 C 1.35453 * 107.86576 * 359.75451 * 14 13 12 19 19 N 1.35537 * 108.87115 * 0.02562 * 18 14 13 20 20 C 1.53774 * 113.61688 * 174.99567 * 4 3 2 21 21 H 1.08999 * 109.47808 * 356.23514 * 3 2 1 22 22 H 1.09009 * 109.47079 * 236.23095 * 3 2 1 23 23 H 1.08997 * 113.61438 * 105.45614 * 6 4 3 24 24 H 1.08999 * 113.61056 * 334.55842 * 6 4 3 25 25 H 0.97004 * 119.99755 * 72.49704 * 9 7 6 26 26 H 1.08007 * 126.45507 * 0.02597 * 13 12 10 27 27 H 1.09005 * 109.46720 * 60.02600 * 15 14 13 28 28 H 0.96700 * 113.99695 * 300.00234 * 16 15 14 29 29 H 1.48494 * 110.00083 * 58.68068 * 17 15 14 30 30 H 1.48498 * 109.99938 * 180.02562 * 17 15 14 31 31 H 1.07998 * 125.56325 * 179.97438 * 18 14 13 32 32 H 0.97001 * 125.67560 * 179.97438 * 19 18 14 33 33 H 1.08996 * 113.61547 * 25.51987 * 20 4 3 34 34 H 1.09003 * 113.61751 * 254.61561 * 20 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1177 0.6386 -1.2939 5 1 2.5749 1.5452 -1.5613 6 6 3.2655 -0.3566 -2.4570 7 6 4.5663 0.3797 -2.8181 8 1 5.3737 -0.2840 -3.1278 9 7 4.3691 1.5031 -3.7376 10 6 4.7693 1.4021 -5.0205 11 8 5.2949 0.3780 -5.4152 12 6 4.5714 2.5267 -5.9412 13 6 4.9258 2.5617 -7.2731 14 6 4.5609 3.8196 -7.7625 15 6 4.7593 4.3152 -9.1718 16 8 6.1524 4.3017 -9.4898 17 14 4.1062 6.0540 -9.3165 18 6 3.9973 4.5138 -6.7451 19 7 3.9950 3.7383 -5.6335 20 6 4.6463 0.7994 -1.3409 21 1 2.9719 -1.0246 0.0675 22 1 2.9711 0.5721 0.8544 23 1 2.4863 -0.2628 -3.2134 24 1 3.4214 -1.3858 -2.1338 25 1 3.9504 2.3196 -3.4229 26 1 5.3995 1.7682 -7.8322 27 1 4.2223 3.6665 -9.8640 28 1 6.6929 4.8585 -8.9127 29 1 4.8082 6.9418 -8.3553 30 1 4.2955 6.5540 -10.7019 31 1 3.6132 5.5212 -6.8089 32 1 3.6484 3.9956 -4.7649 33 1 5.1799 0.0862 -0.7127 34 1 4.9820 1.8263 -1.1963 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_10543058.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:02:21 Heat of formation + Delta-G solvation = 26.510357 kcal Electronic energy + Delta-G solvation = -18695.368003 eV Core-core repulsion = 15596.322423 eV Total energy + Delta-G solvation = -3099.045580 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 262.110 amu Computer time = 0.39 seconds Orbital eigenvalues (eV) -42.49387 -41.05339 -39.37677 -37.80270 -37.47956 -34.78913 -32.57167 -31.33760 -30.39668 -26.64197 -26.61686 -24.99480 -23.57845 -21.31692 -20.84871 -20.40359 -19.89760 -18.53958 -17.59480 -17.24434 -16.73968 -16.51373 -16.05642 -15.96511 -15.63438 -15.59253 -14.98751 -14.64097 -14.53760 -14.37409 -14.02888 -13.84898 -13.67550 -13.45800 -13.33993 -13.08699 -12.45209 -12.36710 -11.90263 -11.81530 -11.47325 -11.32957 -11.12067 -10.51429 -10.20805 -9.94372 -9.28950 -4.84226 0.35751 1.37802 1.57641 1.68782 1.83476 1.88713 1.93037 2.09600 2.15029 2.24965 3.08764 3.52981 3.54871 3.70739 3.78371 3.92032 3.96684 3.99355 4.17675 4.37107 4.41374 4.66713 4.73234 4.76421 4.84935 4.88848 4.94126 4.96753 5.02849 5.10813 5.17594 5.24445 5.56407 5.62611 5.73896 6.35760 6.52126 6.63185 6.68398 7.07304 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.518 5.518 2 C 0.233 3.767 3 C -0.015 4.015 4 C -0.099 4.099 5 H 0.099 0.901 6 C -0.155 4.155 7 C 0.103 3.897 8 H 0.086 0.914 9 N -0.698 5.698 10 C 0.589 3.411 11 O -0.576 6.576 12 C -0.070 4.070 13 C -0.106 4.106 14 C -0.225 4.225 15 C -0.061 4.061 16 O -0.557 6.557 17 Si 0.789 3.211 18 C 0.060 3.940 19 N -0.515 5.515 20 C -0.115 4.115 21 H 0.135 0.865 22 H 0.145 0.855 23 H 0.050 0.950 24 H 0.107 0.893 25 H 0.411 0.589 26 H 0.123 0.877 27 H 0.108 0.892 28 H 0.384 0.616 29 H -0.268 1.268 30 H -0.314 1.314 31 H 0.215 0.785 32 H 0.437 0.563 33 H 0.124 0.876 34 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.421 5.724 6.665 8.795 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.196 5.196 2 C -0.083 4.083 3 C -0.054 4.054 4 C -0.119 4.119 5 H 0.117 0.883 6 C -0.194 4.194 7 C -0.002 4.002 8 H 0.104 0.896 9 N -0.349 5.349 10 C 0.378 3.622 11 O -0.455 6.455 12 C -0.183 4.183 13 C -0.133 4.133 14 C -0.231 4.231 15 C -0.169 4.169 16 O -0.365 6.365 17 Si 0.693 3.307 18 C -0.078 4.078 19 N -0.112 5.112 20 C -0.153 4.153 21 H 0.153 0.847 22 H 0.163 0.837 23 H 0.069 0.931 24 H 0.125 0.875 25 H 0.248 0.752 26 H 0.141 0.859 27 H 0.125 0.875 28 H 0.233 0.767 29 H -0.194 1.194 30 H -0.243 1.243 31 H 0.232 0.768 32 H 0.279 0.721 33 H 0.142 0.858 34 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -0.981 5.382 5.995 8.116 hybrid contribution 1.199 -0.086 0.184 1.216 sum 0.218 5.296 6.179 8.141 Atomic orbital electron populations 1.81325 1.15869 1.11355 1.11078 1.30126 0.96151 0.91020 0.91015 1.19718 0.78257 1.06548 1.00904 1.22544 0.97205 0.99054 0.93055 0.88306 1.23656 0.97096 1.00338 0.98289 1.22012 0.98729 0.88801 0.90651 0.89587 1.45401 1.61888 1.18765 1.08814 1.17239 0.77422 0.85545 0.81981 1.90849 1.45740 1.31488 1.77438 1.20142 1.13345 0.88979 0.95827 1.21223 1.01408 0.97994 0.92675 1.19885 1.10372 0.95689 0.97178 1.24764 0.84835 1.13838 0.93503 1.86567 1.18589 1.71253 1.60131 0.94312 0.88658 0.70720 0.77040 1.22374 1.02266 0.98325 0.84823 1.41851 1.45873 1.10777 1.12705 1.23341 0.94507 1.04655 0.92771 0.84715 0.83693 0.93072 0.87451 0.75212 0.85932 0.87458 0.76673 1.19383 1.24302 0.76834 0.72129 0.85782 0.88908 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -4.11 18.54 20.00 0.37 -3.74 16 2 C 0.23 -0.46 15.42 89.44 1.38 0.92 16 3 C -0.01 0.21 5.54 28.79 0.16 0.37 16 4 C -0.10 1.26 3.49 -10.27 -0.04 1.23 16 5 H 0.10 -1.27 8.12 -2.38 -0.02 -1.29 16 6 C -0.16 1.08 7.43 31.12 0.23 1.32 16 7 C 0.10 -0.59 4.32 45.52 0.20 -0.39 16 8 H 0.09 -0.03 7.46 -2.39 -0.02 -0.05 16 9 N -0.70 3.30 5.26 -444.00 -2.33 0.97 16 10 C 0.59 2.65 7.79 86.45 0.67 3.32 16 11 O -0.58 -8.40 16.48 -4.31 -0.07 -8.47 16 12 C -0.07 -0.13 7.06 40.35 0.28 0.16 16 13 C -0.11 -0.63 10.59 22.57 0.24 -0.39 16 14 C -0.22 -0.01 5.44 -20.12 -0.11 -0.12 16 15 C -0.06 -0.02 3.02 71.24 0.22 0.19 16 16 O -0.56 -2.77 12.88 -148.98 -1.92 -4.69 16 17 Si 0.79 -3.56 30.59 68.60 2.10 -1.47 16 18 C 0.06 -0.42 10.45 83.48 0.87 0.45 16 19 N -0.51 3.84 5.99 -183.61 -1.10 2.74 16 20 C -0.11 1.61 7.39 31.12 0.23 1.84 16 21 H 0.14 -2.34 7.85 -2.39 -0.02 -2.36 16 22 H 0.15 -2.77 8.14 -2.38 -0.02 -2.79 16 23 H 0.05 -0.10 8.14 -2.39 -0.02 -0.12 16 24 H 0.11 -0.93 7.90 -2.39 -0.02 -0.95 16 25 H 0.41 -4.92 7.83 -92.70 -0.73 -5.65 16 26 H 0.12 1.30 8.06 -2.91 -0.02 1.27 16 27 H 0.11 0.10 7.96 -2.38 -0.02 0.08 16 28 H 0.38 -0.54 8.70 -74.06 -0.64 -1.19 16 29 H -0.27 0.81 7.11 99.48 0.71 1.52 16 30 H -0.31 -1.58 7.11 99.48 0.71 -0.87 16 31 H 0.22 -3.19 6.19 -2.91 -0.02 -3.21 16 32 H 0.44 -6.78 8.19 -92.71 -0.76 -7.54 16 33 H 0.12 -2.10 8.10 -2.39 -0.02 -2.12 16 34 H 0.09 -1.46 8.14 -2.39 -0.02 -1.48 16 Total: 0.00 -32.97 302.66 0.45 -32.52 By element: Atomic # 1 Polarization: -25.80 SS G_CDS: -0.93 Total: -26.73 kcal Atomic # 6 Polarization: 4.54 SS G_CDS: 4.34 Total: 8.88 kcal Atomic # 7 Polarization: 3.03 SS G_CDS: -3.06 Total: -0.04 kcal Atomic # 8 Polarization: -11.17 SS G_CDS: -1.99 Total: -13.16 kcal Atomic # 14 Polarization: -3.56 SS G_CDS: 2.10 Total: -1.47 kcal Total: -32.97 0.45 -32.52 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_10543058.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 59.027 kcal (2) G-P(sol) polarization free energy of solvation -32.968 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.059 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.517 kcal (6) G-S(sol) free energy of system = (1) + (5) 26.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.39 seconds