Wall clock time and date at job start Tue Mar 9 2021 13:03:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.47195 * 179.97438 * 2 1 4 4 C 1.52994 * 109.47412 * 304.01526 * 3 2 1 5 5 H 1.09002 * 112.84929 * 316.20253 * 4 3 2 6 6 C 1.53782 * 113.61734 * 185.00178 * 4 3 2 7 7 C 1.53781 * 87.08260 * 220.02231 * 6 4 3 8 8 H 1.09002 * 113.61445 * 139.98212 * 7 6 4 9 9 N 1.46497 * 113.61305 * 270.79919 * 7 6 4 10 10 C 1.34780 * 119.99653 * 203.46742 * 9 7 6 11 11 O 1.21510 * 120.00354 * 0.02562 * 10 9 7 12 12 C 1.48176 * 119.99793 * 179.97438 * 10 9 7 13 13 C 1.39269 * 119.72193 * 180.02562 * 12 10 9 14 14 C 1.38631 * 119.05998 * 179.97438 * 13 12 10 15 15 C 1.38591 * 118.48732 * 0.02562 * 14 13 12 16 16 C 1.50699 * 120.31924 * 179.97438 * 15 14 13 17 17 O 1.42894 * 109.47296 * 65.00306 * 16 15 14 18 18 Si 1.86309 * 109.46747 * 185.00104 * 16 15 14 19 19 C 1.38597 * 119.35134 * 0.02562 * 15 14 13 20 20 N 1.31501 * 120.90200 * 359.71740 * 19 15 14 21 21 C 1.53786 * 87.17350 * 25.39213 * 7 6 4 22 22 H 1.09005 * 109.46498 * 184.02236 * 3 2 1 23 23 H 1.08998 * 109.47208 * 64.02288 * 3 2 1 24 24 H 1.09001 * 113.61250 * 105.47049 * 6 4 3 25 25 H 1.08996 * 113.68722 * 334.58363 * 6 4 3 26 26 H 0.96995 * 120.00146 * 23.47603 * 9 7 6 27 27 H 1.07994 * 120.47010 * 0.02759 * 13 12 10 28 28 H 1.07998 * 120.75438 * 180.02562 * 14 13 12 29 29 H 1.08998 * 109.47270 * 304.99753 * 16 15 14 30 30 H 0.96705 * 114.00098 * 59.99891 * 17 16 15 31 31 H 1.48497 * 109.99619 * 180.02562 * 18 16 15 32 32 H 1.48501 * 109.99967 * 301.32141 * 18 16 15 33 33 H 1.08000 * 119.54838 * 180.02562 * 19 15 14 34 34 H 1.08993 * 113.61491 * 89.15923 * 21 7 6 35 35 H 1.09000 * 113.61138 * 220.06261 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1184 -0.8060 1.1956 5 1 2.5759 -0.5885 2.1156 6 6 4.6471 -0.7667 1.3579 7 6 4.5679 -2.2581 1.7243 8 1 5.3745 -2.8556 1.2993 9 7 4.3733 -2.5011 3.1558 10 6 4.7465 -3.6781 3.6963 11 8 5.2447 -4.5373 2.9963 12 6 4.5502 -3.9237 5.1443 13 6 4.9384 -5.1418 5.6968 14 6 4.7489 -5.3568 7.0532 15 6 4.1772 -4.3457 7.8092 16 6 3.9517 -4.5355 9.2871 17 8 5.2119 -4.6616 9.9489 18 14 3.0365 -3.0632 9.9697 19 6 3.8138 -3.1589 7.1925 20 7 4.0095 -2.9795 5.9046 21 6 3.2658 -2.3113 0.9078 22 1 2.9708 1.0260 0.0721 23 1 2.9715 -0.4493 -0.9238 24 1 4.9829 -0.1327 2.1785 25 1 5.1814 -0.5733 0.4277 26 1 3.9758 -1.8152 3.7146 27 1 5.3816 -5.9076 5.0776 28 1 5.0403 -6.2909 7.5103 29 1 3.3628 -5.4377 9.4519 30 1 5.7896 -3.8931 9.8447 31 1 2.8085 -3.2379 11.4266 32 1 3.8143 -1.8225 9.7228 33 1 3.3683 -2.3687 7.7787 34 1 3.4205 -2.5412 -0.1463 35 1 2.4880 -2.9225 1.3656 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_13287726.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:03:48 Heat of formation + Delta-G solvation = 23.519782 kcal Electronic energy + Delta-G solvation = -19908.145918 eV Core-core repulsion = 16680.744516 eV Total energy + Delta-G solvation = -3227.401401 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.110 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.95802 -40.91761 -39.45873 -38.00644 -37.45789 -34.84660 -33.66235 -32.97984 -31.01951 -27.87433 -26.59873 -25.10830 -24.71744 -23.54320 -22.06649 -20.25198 -19.41744 -18.70446 -18.40759 -17.76195 -16.89025 -16.61889 -16.51333 -16.27818 -16.10062 -15.85558 -15.62824 -15.18926 -14.64180 -14.49843 -14.38735 -14.21292 -14.00449 -13.64216 -13.48949 -13.31252 -13.06597 -12.63845 -12.33838 -12.14417 -11.86875 -11.46075 -11.41293 -11.09565 -11.08410 -10.69483 -10.66771 -10.39241 -10.03331 -4.92728 -0.60834 0.07111 1.23724 1.52822 1.58139 1.85435 1.90603 1.95809 1.96169 2.64794 2.93998 3.11494 3.33455 3.49407 3.55705 3.66150 3.74518 3.77173 3.91920 3.93400 4.00302 4.12710 4.44460 4.46993 4.59276 4.67681 4.78305 4.84608 4.90514 4.95464 4.98858 4.99267 5.13510 5.21114 5.28465 5.37534 5.63988 6.28041 6.42208 6.61218 6.70355 7.05694 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.518 5.518 2 C 0.233 3.767 3 C -0.014 4.014 4 C -0.102 4.102 5 H 0.092 0.908 6 C -0.115 4.115 7 C 0.100 3.900 8 H 0.092 0.908 9 N -0.684 5.684 10 C 0.570 3.430 11 O -0.566 6.566 12 C 0.063 3.937 13 C -0.116 4.116 14 C -0.053 4.053 15 C -0.140 4.140 16 C -0.078 4.078 17 O -0.543 6.543 18 Si 0.763 3.237 19 C 0.099 3.901 20 N -0.459 5.459 21 C -0.152 4.152 22 H 0.145 0.855 23 H 0.138 0.862 24 H 0.088 0.912 25 H 0.129 0.871 26 H 0.419 0.581 27 H 0.149 0.851 28 H 0.161 0.839 29 H 0.136 0.864 30 H 0.388 0.612 31 H -0.300 1.300 32 H -0.272 1.272 33 H 0.185 0.815 34 H 0.112 0.888 35 H 0.049 0.951 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.819 3.366 0.892 4.480 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.196 5.196 2 C -0.083 4.083 3 C -0.053 4.053 4 C -0.121 4.121 5 H 0.111 0.889 6 C -0.153 4.153 7 C -0.005 4.005 8 H 0.110 0.890 9 N -0.334 5.334 10 C 0.355 3.645 11 O -0.444 6.444 12 C -0.075 4.075 13 C -0.137 4.137 14 C -0.078 4.078 15 C -0.142 4.142 16 C -0.187 4.187 17 O -0.352 6.352 18 Si 0.668 3.332 19 C -0.060 4.060 20 N -0.170 5.170 21 C -0.191 4.191 22 H 0.162 0.838 23 H 0.156 0.844 24 H 0.106 0.894 25 H 0.147 0.853 26 H 0.257 0.743 27 H 0.166 0.834 28 H 0.179 0.821 29 H 0.154 0.846 30 H 0.238 0.762 31 H -0.228 1.228 32 H -0.198 1.198 33 H 0.202 0.798 34 H 0.130 0.870 35 H 0.068 0.932 Dipole moment (debyes) X Y Z Total from point charges 1.010 3.663 0.642 3.854 hybrid contribution 1.438 -0.763 0.836 1.830 sum 2.447 2.900 1.478 4.072 Atomic orbital electron populations 1.81313 1.15858 1.11476 1.11001 1.30137 0.96177 0.90898 0.91097 1.19713 0.78248 1.05732 1.01603 1.22566 0.97270 0.94200 0.98101 0.88923 1.23334 0.94509 0.92826 1.04629 1.22095 0.98938 0.99719 0.79701 0.88994 1.45513 1.61462 1.16348 1.10076 1.18075 0.77678 0.82590 0.86125 1.90787 1.45723 1.45650 1.62283 1.21123 0.99978 0.92408 0.93946 1.22289 0.97702 0.97393 0.96330 1.21750 0.93942 0.99975 0.92162 1.21672 0.99070 0.95144 0.98329 1.25195 0.90822 1.14447 0.88242 1.86619 1.27845 1.45847 1.74853 0.94076 0.86553 0.73362 0.79237 1.23054 0.96282 0.96484 0.90229 1.67518 1.11359 1.31153 1.07010 1.23677 0.96957 0.96644 1.01825 0.83781 0.84390 0.89369 0.85326 0.74320 0.83355 0.82132 0.84648 0.76208 1.22759 1.19824 0.79844 0.86966 0.93207 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -4.93 18.54 20.00 0.37 -4.56 16 2 C 0.23 -0.06 15.42 89.44 1.38 1.32 16 3 C -0.01 0.16 5.54 28.79 0.16 0.32 16 4 C -0.10 1.01 3.50 -10.21 -0.04 0.98 16 5 H 0.09 -0.76 8.12 -2.39 -0.02 -0.78 16 6 C -0.12 1.34 7.38 31.12 0.23 1.57 16 7 C 0.10 -0.39 4.30 45.52 0.20 -0.20 16 8 H 0.09 -0.03 7.50 -2.39 -0.02 -0.05 16 9 N -0.68 0.38 5.25 -442.59 -2.33 -1.95 16 10 C 0.57 3.22 7.81 86.88 0.68 3.90 16 11 O -0.57 -6.90 15.94 -3.75 -0.06 -6.96 16 12 C 0.06 0.22 6.75 41.90 0.28 0.50 16 13 C -0.12 -0.21 9.63 22.61 0.22 0.01 16 14 C -0.05 0.10 9.83 22.45 0.22 0.32 16 15 C -0.14 0.50 5.37 -19.69 -0.11 0.40 16 16 C -0.08 0.41 2.82 71.24 0.20 0.61 16 17 O -0.54 1.06 12.84 -148.98 -1.91 -0.85 16 18 Si 0.76 -4.75 29.91 68.60 2.05 -2.69 16 19 C 0.10 -0.30 9.84 84.83 0.83 0.54 16 20 N -0.46 -0.35 9.54 -184.90 -1.76 -2.12 16 21 C -0.15 0.82 7.45 31.18 0.23 1.05 16 22 H 0.14 -2.49 8.14 -2.38 -0.02 -2.51 16 23 H 0.14 -2.27 7.85 -2.39 -0.02 -2.29 16 24 H 0.09 -1.06 8.14 -2.39 -0.02 -1.08 16 25 H 0.13 -2.03 8.10 -2.39 -0.02 -2.05 16 26 H 0.42 -1.50 8.03 -92.71 -0.74 -2.24 16 27 H 0.15 0.30 7.64 -2.91 -0.02 0.28 16 28 H 0.16 -0.81 8.06 -2.91 -0.02 -0.83 16 29 H 0.14 -0.99 7.96 -2.39 -0.02 -1.01 16 30 H 0.39 -2.88 8.70 -74.05 -0.64 -3.53 16 31 H -0.30 -0.65 7.11 99.48 0.71 0.06 16 32 H -0.27 0.89 7.01 99.48 0.70 1.58 16 33 H 0.19 -1.45 4.86 -2.91 -0.01 -1.47 16 34 H 0.11 -0.92 7.90 -2.39 -0.02 -0.94 16 35 H 0.05 0.00 8.14 -2.39 -0.02 -0.02 16 Total: 0.00 -25.32 310.92 0.63 -24.69 By element: Atomic # 1 Polarization: -16.67 SS G_CDS: -0.22 Total: -16.89 kcal Atomic # 6 Polarization: 6.84 SS G_CDS: 4.49 Total: 11.33 kcal Atomic # 7 Polarization: -4.90 SS G_CDS: -3.72 Total: -8.62 kcal Atomic # 8 Polarization: -5.84 SS G_CDS: -1.97 Total: -7.82 kcal Atomic # 14 Polarization: -4.75 SS G_CDS: 2.05 Total: -2.69 kcal Total: -25.32 0.63 -24.69 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_13287726.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.209 kcal (2) G-P(sol) polarization free energy of solvation -25.322 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.887 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.633 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.689 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.520 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds