Wall clock time and date at job start Tue Mar 9 2021 13:04:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 C 1.53007 * 109.46968 * 178.42716 * 3 2 1 5 5 H 1.09006 * 112.84718 * 316.19292 * 4 3 2 6 6 C 1.53777 * 113.61587 * 185.00161 * 4 3 2 7 7 C 1.53782 * 87.08080 * 219.93645 * 6 4 3 8 8 H 1.09000 * 113.61781 * 140.06252 * 7 6 4 9 9 N 1.46502 * 113.61236 * 270.88411 * 7 6 4 10 10 C 1.34778 * 119.99999 * 205.00097 * 9 7 6 11 11 O 1.21548 * 119.99843 * 359.97438 * 10 9 7 12 12 C 1.47842 * 119.99852 * 179.97438 * 10 9 7 13 13 C 1.39987 * 120.55646 * 179.97438 * 12 10 9 14 14 C 1.38401 * 118.28559 * 179.97438 * 13 12 10 15 15 C 1.50702 * 120.34449 * 180.02562 * 14 13 12 16 16 O 1.42897 * 109.47193 * 64.98128 * 15 14 13 17 17 Si 1.86298 * 109.46811 * 184.98157 * 15 14 13 18 18 C 1.38304 * 119.30570 * 0.02562 * 14 13 12 19 19 N 1.31964 * 121.08162 * 359.97438 * 18 14 13 20 20 C 1.31659 * 121.88028 * 0.02562 * 19 18 14 21 21 C 1.53774 * 113.68971 * 87.46063 * 4 3 2 22 22 H 1.09003 * 109.47221 * 58.43035 * 3 2 1 23 23 H 1.08996 * 109.47132 * 298.42264 * 3 2 1 24 24 H 1.08999 * 113.61773 * 105.38706 * 6 4 3 25 25 H 1.09000 * 113.68729 * 334.49259 * 6 4 3 26 26 H 0.96997 * 119.99966 * 24.99743 * 9 7 6 27 27 H 1.08002 * 120.85899 * 0.02562 * 13 12 10 28 28 H 1.09005 * 109.47071 * 304.97833 * 15 14 13 29 29 H 0.96697 * 113.99704 * 59.99582 * 16 15 14 30 30 H 1.48498 * 110.00162 * 179.97438 * 17 15 14 31 31 H 1.48500 * 110.00062 * 301.31711 * 17 15 14 32 32 H 1.07998 * 119.45840 * 180.02562 * 18 14 13 33 33 H 1.07994 * 119.71704 * 179.97438 * 20 19 18 34 34 H 1.09000 * 113.61674 * 25.45028 * 21 4 3 35 35 H 1.09000 * 113.62070 * 254.53835 * 21 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1174 1.4429 -0.0396 5 1 2.5747 2.0640 -0.7523 6 6 4.6460 1.5532 -0.1655 7 6 4.5652 2.7205 0.8324 8 1 5.3722 2.7252 1.5651 9 7 4.3678 4.0247 0.1950 10 6 4.7674 5.1487 0.8223 11 8 5.2912 5.0803 1.9170 12 6 4.5687 6.4648 0.1788 13 6 4.9789 7.6397 0.8200 14 6 4.7705 8.8461 0.1746 15 6 5.1944 10.1392 0.8221 16 8 6.6176 10.1645 0.9483 17 14 4.6387 11.5722 -0.2306 18 6 4.1690 8.8526 -1.0708 19 7 3.7925 7.7289 -1.6514 20 6 3.9691 6.5569 -1.0781 21 6 3.2642 2.0847 1.3501 22 1 2.9716 -0.5372 -0.8756 23 1 2.9716 -0.4883 0.9038 24 1 4.9820 1.8504 -1.1589 25 1 5.1809 0.6853 0.2202 26 1 3.9495 4.0793 -0.6784 27 1 5.4466 7.6055 1.7928 28 1 4.7406 10.2167 1.8102 29 1 7.0883 10.0993 0.1061 30 1 5.0502 12.8534 0.3974 31 1 5.2252 11.4611 -1.5903 32 1 4.0056 9.7925 -1.5769 33 1 3.6471 5.6592 -1.5847 34 1 3.4201 1.3616 2.1507 35 1 2.4848 2.8111 1.5803 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_13287814.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:00 Heat of formation + Delta-G solvation = 23.322100 kcal Electronic energy + Delta-G solvation = -19959.250547 eV Core-core repulsion = 16731.840573 eV Total energy + Delta-G solvation = -3227.409973 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.110 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -41.99805 -40.93774 -39.45749 -38.08022 -37.46698 -34.91195 -33.80192 -33.02277 -30.92547 -27.30838 -26.59248 -26.18950 -24.11178 -23.81738 -21.87453 -20.31133 -19.38302 -18.54592 -18.13373 -17.85751 -17.73250 -16.80544 -16.49321 -16.17605 -16.09922 -15.81187 -15.59324 -15.14928 -14.65406 -14.46884 -14.41679 -14.23504 -14.01103 -13.66614 -13.45773 -13.32101 -13.07128 -12.81262 -12.34387 -12.10244 -11.86861 -11.44837 -11.43249 -11.11251 -11.08421 -10.70757 -10.57630 -10.40763 -10.07312 -4.94547 -0.58648 -0.04210 1.21601 1.56658 1.63892 1.85441 1.90536 1.91175 1.98844 2.61270 3.09582 3.11169 3.32403 3.39862 3.55887 3.63820 3.70384 3.73028 3.74563 3.93548 3.99894 4.09118 4.26367 4.44599 4.52819 4.69329 4.77932 4.81997 4.86580 4.91722 4.96926 4.99652 5.13738 5.20220 5.27048 5.32030 5.63863 6.36840 6.40871 6.64174 6.70368 7.04830 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.519 5.519 2 C 0.233 3.767 3 C -0.015 4.015 4 C -0.101 4.101 5 H 0.099 0.901 6 C -0.116 4.116 7 C 0.103 3.897 8 H 0.088 0.912 9 N -0.693 5.693 10 C 0.566 3.434 11 O -0.574 6.574 12 C -0.197 4.197 13 C -0.002 4.002 14 C -0.173 4.173 15 C -0.082 4.082 16 O -0.547 6.547 17 Si 0.773 3.227 18 C 0.127 3.873 19 N -0.494 5.494 20 C 0.147 3.853 21 C -0.155 4.155 22 H 0.145 0.855 23 H 0.136 0.864 24 H 0.093 0.907 25 H 0.124 0.876 26 H 0.415 0.585 27 H 0.137 0.863 28 H 0.128 0.872 29 H 0.388 0.612 30 H -0.299 1.299 31 H -0.270 1.270 32 H 0.182 0.818 33 H 0.192 0.808 34 H 0.108 0.892 35 H 0.051 0.949 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.112 -1.927 -4.468 5.305 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.197 5.197 2 C -0.083 4.083 3 C -0.054 4.054 4 C -0.121 4.121 5 H 0.117 0.883 6 C -0.154 4.154 7 C -0.002 4.002 8 H 0.106 0.894 9 N -0.344 5.344 10 C 0.353 3.647 11 O -0.454 6.454 12 C -0.203 4.203 13 C -0.028 4.028 14 C -0.175 4.175 15 C -0.191 4.191 16 O -0.355 6.355 17 Si 0.677 3.323 18 C -0.028 4.028 19 N -0.202 5.202 20 C -0.011 4.011 21 C -0.193 4.193 22 H 0.162 0.838 23 H 0.153 0.847 24 H 0.111 0.889 25 H 0.143 0.857 26 H 0.253 0.747 27 H 0.155 0.845 28 H 0.146 0.854 29 H 0.237 0.763 30 H -0.227 1.227 31 H -0.196 1.196 32 H 0.198 0.802 33 H 0.209 0.791 34 H 0.126 0.874 35 H 0.070 0.930 Dipole moment (debyes) X Y Z Total from point charges 0.473 -1.247 -4.370 4.569 hybrid contribution 1.574 -0.213 0.640 1.713 sum 2.048 -1.460 -3.730 4.499 Atomic orbital electron populations 1.81325 1.15907 1.10876 1.11624 1.30146 0.96171 0.91088 0.90889 1.19722 0.78211 0.98857 1.08622 1.22566 0.97301 0.94656 0.97589 0.88314 1.23347 0.94454 0.97457 1.00108 1.22029 0.98764 0.81944 0.97429 0.89356 1.45487 1.61264 1.05055 1.22606 1.18182 0.77485 0.84512 0.84501 1.90798 1.45069 1.87543 1.21976 1.21024 1.06704 0.94086 0.98443 1.21668 0.91266 0.90730 0.99167 1.21347 1.02589 0.96667 0.96915 1.25272 0.83945 1.00659 1.09219 1.86617 1.17009 1.95450 1.36409 0.94023 0.90210 0.73023 0.75062 1.23253 0.90903 0.97701 0.90986 1.67817 1.18156 0.98716 1.35510 1.23457 0.90741 0.97058 0.89872 1.23654 0.97098 1.00354 0.98205 0.83759 0.84656 0.88871 0.85733 0.74657 0.84523 0.85439 0.76267 1.22651 1.19579 0.80157 0.79135 0.87391 0.92962 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -4.41 18.54 20.01 0.37 -4.04 16 2 C 0.23 -0.35 15.42 89.44 1.38 1.03 16 3 C -0.01 0.20 5.54 28.79 0.16 0.36 16 4 C -0.10 1.26 3.49 -10.27 -0.04 1.23 16 5 H 0.10 -1.20 8.12 -2.38 -0.02 -1.22 16 6 C -0.12 1.62 7.39 31.12 0.23 1.85 16 7 C 0.10 -0.65 4.32 45.52 0.20 -0.46 16 8 H 0.09 -0.13 7.46 -2.39 -0.02 -0.15 16 9 N -0.69 3.51 5.22 -442.90 -2.31 1.20 16 10 C 0.57 1.57 7.78 86.79 0.68 2.25 16 11 O -0.57 -6.72 16.02 -3.87 -0.06 -6.79 16 12 C -0.20 -0.13 5.89 -19.99 -0.12 -0.25 16 13 C 0.00 0.00 9.38 22.73 0.21 0.21 16 14 C -0.17 0.20 5.35 -19.81 -0.11 0.10 16 15 C -0.08 0.19 2.82 71.24 0.20 0.39 16 16 O -0.55 -0.75 12.84 -148.98 -1.91 -2.67 16 17 Si 0.77 -3.70 29.91 68.60 2.05 -1.65 16 18 C 0.13 -0.28 9.84 84.69 0.83 0.55 16 19 N -0.49 0.16 10.35 -194.76 -2.01 -1.85 16 20 C 0.15 -0.46 10.71 85.04 0.91 0.45 16 21 C -0.15 1.14 7.43 31.12 0.23 1.37 16 22 H 0.14 -2.69 8.14 -2.39 -0.02 -2.71 16 23 H 0.14 -2.34 7.85 -2.39 -0.02 -2.36 16 24 H 0.09 -1.44 8.14 -2.39 -0.02 -1.46 16 25 H 0.12 -2.13 8.10 -2.39 -0.02 -2.15 16 26 H 0.41 -4.68 6.77 -92.71 -0.63 -5.31 16 27 H 0.14 0.69 7.74 -2.91 -0.02 0.67 16 28 H 0.13 -0.43 7.96 -2.38 -0.02 -0.45 16 29 H 0.39 -1.83 8.70 -74.06 -0.64 -2.47 16 30 H -0.30 -1.01 7.11 99.48 0.71 -0.30 16 31 H -0.27 0.61 7.01 99.48 0.70 1.31 16 32 H 0.18 -1.22 4.84 -2.91 -0.01 -1.23 16 33 H 0.19 -2.05 6.42 -2.91 -0.02 -2.07 16 34 H 0.11 -0.99 7.90 -2.39 -0.02 -1.01 16 35 H 0.05 -0.13 8.14 -2.39 -0.02 -0.15 16 Total: 0.00 -28.58 308.64 0.80 -27.78 By element: Atomic # 1 Polarization: -20.97 SS G_CDS: -0.09 Total: -21.06 kcal Atomic # 6 Polarization: 4.31 SS G_CDS: 4.77 Total: 9.08 kcal Atomic # 7 Polarization: -0.74 SS G_CDS: -3.95 Total: -4.69 kcal Atomic # 8 Polarization: -7.48 SS G_CDS: -1.97 Total: -9.45 kcal Atomic # 14 Polarization: -3.70 SS G_CDS: 2.05 Total: -1.65 kcal Total: -28.58 0.80 -27.78 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_13287814.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.104 kcal (2) G-P(sol) polarization free energy of solvation -28.581 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 22.523 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.799 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.782 kcal (6) G-S(sol) free energy of system = (1) + (5) 23.322 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds