Wall clock time and date at job start Tue Mar 9 2021 13:04:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 C 1.53003 * 109.46807 * 135.59594 * 3 2 1 5 5 H 1.09007 * 112.84668 * 316.19302 * 4 3 2 6 6 C 1.53776 * 113.61582 * 185.00066 * 4 3 2 7 7 C 1.53777 * 87.08159 * 220.01599 * 6 4 3 8 8 H 1.09005 * 113.61754 * 140.06300 * 7 6 4 9 9 N 1.46496 * 113.61609 * 270.88073 * 7 6 4 10 10 C 1.34779 * 120.00573 * 204.99824 * 9 7 6 11 11 O 1.21616 * 119.99352 * 0.02562 * 10 9 7 12 12 C 1.47369 * 120.00404 * 180.02562 * 10 9 7 13 13 C 1.36423 * 127.19303 * 359.97438 * 12 10 9 14 14 O 1.33652 * 108.39919 * 180.26402 * 13 12 10 15 15 C 1.34217 * 110.90450 * 359.58981 * 14 13 12 16 16 C 1.50701 * 125.43642 * 180.17080 * 15 14 13 17 17 O 1.42903 * 109.47002 * 245.28424 * 16 15 14 18 18 Si 1.86304 * 109.47110 * 5.28194 * 16 15 14 19 19 C 1.34179 * 109.12972 * 0.41552 * 15 14 13 20 20 C 1.53780 * 87.08263 * 25.43120 * 7 6 4 21 21 H 1.08995 * 109.47250 * 15.59764 * 3 2 1 22 22 H 1.09000 * 109.47080 * 255.59143 * 3 2 1 23 23 H 1.08998 * 113.62117 * 105.46611 * 6 4 3 24 24 H 1.09004 * 113.69239 * 334.57552 * 6 4 3 25 25 H 0.97010 * 119.99926 * 24.99679 * 9 7 6 26 26 H 1.08002 * 125.79741 * 359.97438 * 13 12 10 27 27 H 1.09003 * 109.47329 * 125.28351 * 16 15 14 28 28 H 0.96698 * 114.00355 * 59.99797 * 17 16 15 29 29 H 1.48500 * 109.99653 * 180.02562 * 18 16 15 30 30 H 1.48500 * 109.99726 * 301.31718 * 18 16 15 31 31 H 1.07994 * 127.02812 * 179.73844 * 19 15 14 32 32 H 1.08997 * 113.61584 * 89.11372 * 20 7 6 33 33 H 1.09000 * 113.61780 * 220.01883 * 20 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1175 1.0315 -1.0094 5 1 2.5751 1.0024 -1.9545 6 6 4.6462 1.0270 -1.1762 7 6 4.5654 2.5615 -1.2359 8 1 5.3723 3.0624 -0.7008 9 7 4.3685 3.0866 -2.5893 10 6 4.7682 4.3377 -2.8916 11 8 5.2928 5.0306 -2.0408 12 6 4.5696 4.8661 -4.2528 13 6 4.0021 4.2217 -5.3130 14 8 4.0176 5.0458 -6.3651 15 6 4.5696 6.2256 -6.0412 16 6 4.7480 7.3931 -6.9773 17 8 6.1422 7.6327 -7.1795 18 14 3.9406 7.0079 -8.6115 19 6 4.9421 6.1978 -4.7525 20 6 3.2642 2.4461 -0.4245 21 1 2.9718 -0.9889 -0.2763 22 1 2.9712 0.2565 0.9953 23 1 4.9826 0.5709 -2.1073 24 1 5.1809 0.6515 -0.3037 25 1 3.9504 2.5337 -3.2680 26 1 3.6114 3.2149 -5.3047 27 1 4.2860 8.2802 -6.5439 28 1 6.6184 6.8838 -7.5635 29 1 4.1101 8.1513 -9.5437 30 1 4.5400 5.7821 -9.1976 31 1 5.4184 6.9913 -4.1959 32 1 3.4198 2.4586 0.6543 33 1 2.4848 3.1357 -0.7487 There are 47 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 47 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_13456056.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:04:24 Heat of formation + Delta-G solvation = 4.933007 kcal Electronic energy + Delta-G solvation = -18773.525811 eV Core-core repulsion = 15575.825905 eV Total energy + Delta-G solvation = -3197.699906 eV No. of doubly occupied orbitals = 47 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 263.099 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -43.77036 -41.36457 -39.48711 -38.18277 -37.43067 -34.82792 -33.86751 -32.04193 -31.03237 -26.93457 -26.84059 -25.61854 -23.98156 -22.33715 -21.22332 -20.49266 -19.46336 -18.71515 -17.90460 -17.58543 -17.41812 -17.05712 -16.36750 -16.25104 -16.01711 -15.89422 -15.46203 -15.07213 -14.50662 -14.20037 -14.08823 -13.96201 -13.72484 -13.70632 -13.57745 -13.22707 -12.98955 -12.60789 -12.18391 -12.11169 -11.70884 -11.40664 -11.11995 -10.94302 -10.79445 -10.19351 -9.86906 -5.03395 0.17311 0.84746 1.08374 1.43408 1.67246 1.77229 1.82043 1.88199 1.94777 2.27969 2.85455 3.09687 3.23591 3.32409 3.39337 3.51294 3.64092 3.66606 3.85414 4.03815 4.23710 4.30066 4.33284 4.39589 4.51936 4.53789 4.54107 4.69015 4.74915 4.85284 4.86791 4.96741 5.17812 5.44251 5.77626 6.19232 6.35349 6.59279 7.14028 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.202 3.798 3 C -0.017 4.017 4 C -0.110 4.110 5 H 0.097 0.903 6 C -0.136 4.136 7 C 0.120 3.880 8 H 0.109 0.891 9 N -0.712 5.712 10 C 0.591 3.409 11 O -0.528 6.528 12 C -0.238 4.238 13 C 0.033 3.967 14 O -0.166 6.166 15 C -0.056 4.056 16 C -0.035 4.035 17 O -0.520 6.520 18 Si 0.704 3.296 19 C -0.122 4.122 20 C -0.150 4.150 21 H 0.113 0.887 22 H 0.112 0.888 23 H 0.080 0.920 24 H 0.105 0.895 25 H 0.398 0.602 26 H 0.213 0.787 27 H 0.138 0.862 28 H 0.380 0.620 29 H -0.249 1.249 30 H -0.256 1.256 31 H 0.163 0.837 32 H 0.099 0.901 33 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.078 -4.018 -2.008 4.620 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.116 4.116 3 C -0.057 4.057 4 C -0.130 4.130 5 H 0.115 0.885 6 C -0.175 4.175 7 C 0.015 3.985 8 H 0.127 0.873 9 N -0.364 5.364 10 C 0.379 3.621 11 O -0.404 6.404 12 C -0.243 4.243 13 C -0.038 4.038 14 O -0.062 6.062 15 C -0.104 4.104 16 C -0.145 4.145 17 O -0.327 6.327 18 Si 0.603 3.397 19 C -0.142 4.142 20 C -0.189 4.189 21 H 0.131 0.869 22 H 0.130 0.870 23 H 0.098 0.902 24 H 0.123 0.877 25 H 0.233 0.767 26 H 0.230 0.770 27 H 0.156 0.844 28 H 0.229 0.771 29 H -0.173 1.173 30 H -0.180 1.180 31 H 0.180 0.820 32 H 0.117 0.883 33 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges -0.374 -3.080 -2.286 3.854 hybrid contribution 1.335 -0.755 0.102 1.537 sum 0.962 -3.835 -2.184 4.517 Atomic orbital electron populations 1.81298 1.13153 1.08422 1.08251 1.29222 0.95343 0.93444 0.93581 1.19342 0.81681 1.02325 1.02377 1.22634 0.96690 0.94740 0.98953 0.88476 1.23389 0.95023 0.95042 1.04005 1.21821 0.98939 0.94684 0.83076 0.87305 1.45492 1.63137 1.14978 1.12755 1.17248 0.77567 0.81076 0.86198 1.90828 1.42711 1.57715 1.49143 1.21506 1.10631 0.97138 0.95005 1.24467 0.99421 0.95746 0.84168 1.83699 1.63161 1.21964 1.37332 1.22685 1.03937 0.87320 0.96499 1.24404 0.87581 0.95231 1.07263 1.86683 1.18576 1.42884 1.84512 0.94443 0.90466 0.80297 0.74498 1.22550 1.01741 0.96533 0.93332 1.23598 0.98324 0.96075 1.00887 0.86911 0.87001 0.90178 0.87699 0.76711 0.77013 0.84427 0.77113 1.17322 1.17989 0.81988 0.88296 0.90725 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.61 18.54 42.15 0.78 -0.83 16 2 C 0.20 -0.10 15.42 -20.76 -0.32 -0.42 16 3 C -0.02 0.09 5.54 -29.52 -0.16 -0.07 16 4 C -0.11 0.58 3.49 -89.81 -0.31 0.26 16 5 H 0.10 -0.51 8.12 -51.92 -0.42 -0.93 16 6 C -0.14 0.77 7.39 -25.92 -0.19 0.58 16 7 C 0.12 -0.33 4.32 -67.12 -0.29 -0.62 16 8 H 0.11 -0.08 7.46 -51.93 -0.39 -0.47 16 9 N -0.71 1.60 5.25 -54.11 -0.28 1.32 16 10 C 0.59 0.96 7.81 -12.54 -0.10 0.86 16 11 O -0.53 -3.16 16.58 5.26 0.09 -3.07 16 12 C -0.24 -0.11 6.31 -103.28 -0.65 -0.76 16 13 C 0.03 -0.08 11.61 30.08 0.35 0.27 16 14 O -0.17 0.15 8.90 7.65 0.07 0.22 16 15 C -0.06 0.01 6.18 -35.74 -0.22 -0.22 16 16 C -0.04 0.04 2.97 36.01 0.11 0.15 16 17 O -0.52 -0.15 12.88 -35.23 -0.45 -0.61 16 18 Si 0.70 -1.22 32.09 -169.99 -5.46 -6.68 16 19 C -0.12 -0.17 10.90 -37.45 -0.41 -0.58 16 20 C -0.15 0.50 7.43 -25.92 -0.19 0.30 16 21 H 0.11 -0.82 8.14 -51.93 -0.42 -1.25 16 22 H 0.11 -0.77 7.84 -51.93 -0.41 -1.18 16 23 H 0.08 -0.48 8.14 -51.93 -0.42 -0.91 16 24 H 0.10 -0.70 8.10 -51.93 -0.42 -1.12 16 25 H 0.40 -2.13 7.67 -40.82 -0.31 -2.44 16 26 H 0.21 -1.50 7.47 -52.49 -0.39 -1.89 16 27 H 0.14 -0.32 7.96 -51.93 -0.41 -0.73 16 28 H 0.38 -0.99 8.70 45.56 0.40 -0.59 16 29 H -0.25 -0.27 7.11 56.52 0.40 0.14 16 30 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 31 H 0.16 0.31 8.06 -52.49 -0.42 -0.11 16 32 H 0.10 -0.40 7.90 -51.93 -0.41 -0.81 16 33 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 LS Contribution 301.55 15.07 4.54 4.54 Total: 0.00 -11.19 301.55 -6.76 -17.95 By element: Atomic # 1 Polarization: -8.95 SS G_CDS: -3.66 Total: -12.60 kcal Atomic # 6 Polarization: 2.15 SS G_CDS: -2.39 Total: -0.24 kcal Atomic # 7 Polarization: -0.01 SS G_CDS: 0.50 Total: 0.49 kcal Atomic # 8 Polarization: -3.16 SS G_CDS: -0.30 Total: -3.46 kcal Atomic # 14 Polarization: -1.22 SS G_CDS: -5.46 Total: -6.68 kcal Total LS contribution 4.54 Total: 4.54 kcal Total: -11.19 -6.76 -17.95 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_13456056.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.886 kcal (2) G-P(sol) polarization free energy of solvation -11.188 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.698 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.765 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.953 kcal (6) G-S(sol) free energy of system = (1) + (5) 4.933 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds