Wall clock time and date at job start Tue Mar 9 2021 13:05:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13603 * 1 3 3 C 1.47196 * 179.97438 * 2 1 4 4 C 1.53001 * 109.47085 * 229.95520 * 3 2 1 5 5 H 1.09004 * 112.84867 * 316.19118 * 4 3 2 6 6 C 1.53779 * 113.61378 * 185.00424 * 4 3 2 7 7 C 1.53779 * 87.07874 * 219.93067 * 6 4 3 8 8 H 1.09008 * 113.61423 * 140.06712 * 7 6 4 9 9 N 1.46504 * 113.61303 * 270.87881 * 7 6 4 10 10 C 1.34775 * 119.99912 * 204.99564 * 9 7 6 11 11 O 1.21284 * 120.00030 * 0.02562 * 10 9 7 12 12 C 1.50701 * 120.00095 * 180.02562 * 10 9 7 13 13 O 1.42901 * 109.47504 * 180.02562 * 12 10 9 14 14 C 1.35892 * 116.99992 * 180.02562 * 13 12 10 15 15 C 1.38714 * 120.05889 * 359.97438 * 14 13 12 16 16 C 1.38161 * 119.94312 * 180.27992 * 15 14 13 17 17 C 1.38250 * 120.05761 * 359.46537 * 16 15 14 18 18 C 1.50697 * 119.94428 * 180.25787 * 17 16 15 19 19 O 1.42898 * 109.47027 * 120.29695 * 18 17 16 20 20 Si 1.86297 * 109.47241 * 0.29614 * 18 17 16 21 21 C 1.38282 * 120.10863 * 0.55702 * 17 16 15 22 22 C 1.38123 * 120.05938 * 359.69766 * 21 17 16 23 23 N 1.48002 * 120.02982 * 180.02562 * 22 21 17 24 24 O 1.21798 * 119.99928 * 0.02562 * 23 22 21 25 25 O 1.21805 * 119.99921 * 180.02562 * 23 22 21 26 26 C 1.53772 * 113.69533 * 87.46380 * 4 3 2 27 27 H 1.08998 * 109.46927 * 109.95317 * 3 2 1 28 28 H 1.09003 * 109.47563 * 349.95351 * 3 2 1 29 29 H 1.09003 * 113.62042 * 105.38019 * 6 4 3 30 30 H 1.09002 * 113.69080 * 334.48699 * 6 4 3 31 31 H 0.96995 * 119.99773 * 25.00854 * 9 7 6 32 32 H 1.08998 * 109.46781 * 60.00398 * 12 10 9 33 33 H 1.08998 * 109.47079 * 300.00903 * 12 10 9 34 34 H 1.08002 * 120.02359 * 359.97438 * 15 14 13 35 35 H 1.07998 * 119.97295 * 179.74769 * 16 15 14 36 36 H 1.09005 * 109.47323 * 240.29972 * 18 17 16 37 37 H 0.96694 * 114.00527 * 299.99623 * 19 18 17 38 38 H 1.48504 * 109.99913 * 58.68210 * 20 18 17 39 39 H 1.48506 * 110.00258 * 179.97438 * 20 18 17 40 40 H 1.08006 * 119.97098 * 179.72383 * 21 17 16 41 41 H 1.09007 * 113.61404 * 25.44532 * 26 4 3 42 42 H 1.09003 * 113.61848 * 254.54134 * 26 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1176 0.9290 1.1043 5 1 2.5748 1.8733 1.1474 6 6 4.6462 1.0964 1.1116 7 6 4.5660 1.0415 2.6464 8 1 5.3734 0.4710 3.1057 9 7 4.3687 2.3519 3.2709 10 6 4.7687 2.5602 4.5410 11 8 5.2925 1.6629 5.1667 12 6 4.5653 3.9080 5.1837 13 8 5.0683 3.8790 6.5210 14 6 4.9609 5.0236 7.2455 15 6 4.3838 6.1516 6.6810 16 6 4.2810 7.3158 7.4179 17 6 4.7427 7.3539 8.7204 18 6 4.6241 8.6234 9.5238 19 8 3.8335 8.3778 10.6885 20 14 3.8105 9.9404 8.4873 21 6 5.3188 6.2308 9.2853 22 6 5.4287 5.0660 8.5512 23 7 6.0448 3.8643 9.1566 24 8 6.4549 3.9020 10.3029 25 8 6.1419 2.8375 8.5085 26 6 3.2651 0.2404 2.4713 27 1 2.9711 0.3515 -0.9660 28 1 2.9719 -1.0111 0.1793 29 1 4.9820 2.0591 0.7261 30 1 5.1811 0.2545 0.6720 31 1 3.9500 3.0696 2.7705 32 1 3.5017 4.1457 5.2003 33 1 5.0984 4.6674 4.6117 34 1 4.0196 6.1213 5.6647 35 1 3.8355 8.1956 6.9775 36 1 5.6173 8.9584 9.8227 37 1 2.9349 8.0760 10.4976 38 1 2.4681 9.4829 8.0468 39 1 3.6870 11.1974 9.2684 40 1 5.6828 6.2644 10.3016 41 1 3.4212 -0.8363 2.4033 42 1 2.4859 0.5119 3.1835 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_4549638.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:11 Heat of formation + Delta-G solvation = -11.748733 kcal Electronic energy + Delta-G solvation = -29447.390211 eV Core-core repulsion = 24978.649117 eV Total energy + Delta-G solvation = -4468.741094 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.125 amu Computer time = 0.77 seconds Orbital eigenvalues (eV) -43.04433 -41.88368 -41.35354 -40.13237 -39.21837 -37.66793 -37.45819 -37.14124 -34.86287 -33.53871 -32.44413 -31.63481 -29.80728 -27.61748 -26.98962 -26.77640 -24.89689 -23.98888 -22.86130 -22.15313 -20.64963 -20.45554 -19.47950 -19.25230 -18.98701 -18.43498 -18.36751 -18.28197 -17.71852 -17.36632 -17.05482 -16.59147 -16.41192 -16.25166 -16.18331 -15.79628 -15.56483 -15.35135 -15.00647 -14.70357 -14.18342 -14.14426 -14.10772 -13.86692 -13.70869 -13.68986 -13.32995 -13.27498 -12.69030 -12.57203 -12.56552 -12.23460 -12.21737 -12.03638 -11.87149 -11.76435 -11.75254 -11.46350 -11.05554 -10.99604 -10.91698 -10.30411 -9.94629 -5.24150 -1.15523 -0.41072 0.35902 0.50944 0.97383 1.02652 1.31282 1.32615 1.73637 1.74005 1.78403 1.90343 2.11166 2.81069 2.94358 2.98330 3.12646 3.17574 3.19576 3.33488 3.34049 3.48569 3.51863 3.52651 3.61440 3.64359 3.67464 3.99301 4.11498 4.15093 4.25619 4.31321 4.35140 4.40485 4.47064 4.49729 4.61710 4.64949 4.77906 4.80630 4.88770 4.89877 5.30816 5.41880 5.67853 6.13763 6.16105 6.55586 6.91782 6.95409 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.202 3.798 3 C -0.018 4.018 4 C -0.111 4.111 5 H 0.097 0.903 6 C -0.135 4.135 7 C 0.121 3.879 8 H 0.111 0.889 9 N -0.712 5.712 10 C 0.516 3.484 11 O -0.492 6.492 12 C 0.031 3.969 13 O -0.253 6.253 14 C 0.200 3.800 15 C -0.210 4.210 16 C -0.024 4.024 17 C -0.156 4.156 18 C -0.072 4.072 19 O -0.525 6.525 20 Si 0.688 3.312 21 C 0.009 3.991 22 C -0.075 4.075 23 N 0.028 4.972 24 O -0.177 6.177 25 O -0.118 6.118 26 C -0.150 4.150 27 H 0.113 0.887 28 H 0.112 0.888 29 H 0.080 0.920 30 H 0.106 0.894 31 H 0.402 0.598 32 H 0.101 0.899 33 H 0.103 0.897 34 H 0.157 0.843 35 H 0.149 0.851 36 H 0.126 0.874 37 H 0.378 0.622 38 H -0.256 1.256 39 H -0.251 1.251 40 H 0.165 0.835 41 H 0.100 0.900 42 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.888 6.624 -9.029 11.234 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.112 5.112 2 C -0.116 4.116 3 C -0.058 4.058 4 C -0.130 4.130 5 H 0.115 0.885 6 C -0.173 4.173 7 C 0.016 3.984 8 H 0.129 0.871 9 N -0.366 5.366 10 C 0.300 3.700 11 O -0.364 6.364 12 C -0.048 4.048 13 O -0.163 6.163 14 C 0.150 3.850 15 C -0.229 4.229 16 C -0.042 4.042 17 C -0.157 4.157 18 C -0.182 4.182 19 O -0.331 6.331 20 Si 0.587 3.413 21 C -0.010 4.010 22 C -0.160 4.160 23 N 0.548 4.452 24 O -0.385 6.385 25 O -0.342 6.342 26 C -0.189 4.189 27 H 0.131 0.869 28 H 0.130 0.870 29 H 0.099 0.901 30 H 0.124 0.876 31 H 0.237 0.763 32 H 0.119 0.881 33 H 0.121 0.879 34 H 0.174 0.826 35 H 0.166 0.834 36 H 0.144 0.856 37 H 0.226 0.774 38 H -0.181 1.181 39 H -0.175 1.175 40 H 0.182 0.818 41 H 0.118 0.882 42 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -0.754 7.084 -8.510 11.098 hybrid contribution -0.589 -0.460 0.368 0.833 sum -1.343 6.623 -8.141 10.581 Atomic orbital electron populations 1.81301 1.13171 1.08300 1.08381 1.29224 0.95346 0.93565 0.93456 1.19343 0.81671 1.02977 1.01773 1.22639 0.96713 0.99242 0.94444 0.88475 1.23387 0.95017 1.04120 0.94822 1.21850 0.99090 0.83977 0.93514 0.87114 1.45444 1.63345 1.14449 1.13346 1.19809 0.79215 0.88958 0.82028 1.90876 1.39950 1.43870 1.61663 1.22723 1.01473 0.98021 0.82570 1.86500 1.75373 1.29891 1.24498 1.18689 0.90933 0.86610 0.88745 1.21267 1.06838 0.92093 1.02671 1.21259 0.92798 0.97421 0.92692 1.20258 1.03294 0.96733 0.95434 1.25072 1.01841 0.98865 0.92398 1.86657 1.28236 1.88427 1.29800 0.95197 0.83145 0.78049 0.84861 1.20845 0.91323 0.88296 1.00497 1.20588 1.13048 0.89126 0.93208 1.43338 0.99073 1.02014 1.00740 1.94559 1.51037 1.90597 1.02336 1.94698 1.58908 1.18868 1.61690 1.23602 0.98208 1.00667 0.96410 0.86875 0.86957 0.90105 0.87608 0.76333 0.88072 0.87872 0.82593 0.83352 0.85606 0.77407 1.18119 1.17502 0.81789 0.88182 0.90758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.46 18.54 42.15 0.78 -0.68 16 2 C 0.20 -0.19 15.42 -20.76 -0.32 -0.51 16 3 C -0.02 0.11 5.54 -29.52 -0.16 -0.06 16 4 C -0.11 0.66 3.49 -89.81 -0.31 0.35 16 5 H 0.10 -0.59 8.12 -51.93 -0.42 -1.01 16 6 C -0.14 0.89 7.39 -25.92 -0.19 0.70 16 7 C 0.12 -0.46 4.32 -67.12 -0.29 -0.75 16 8 H 0.11 -0.18 7.46 -51.92 -0.39 -0.57 16 9 N -0.71 2.97 5.26 -53.01 -0.28 2.69 16 10 C 0.52 -0.33 7.91 -10.99 -0.09 -0.42 16 11 O -0.49 -2.49 16.10 -14.35 -0.23 -2.72 16 12 C 0.03 -0.10 5.22 36.01 0.19 0.08 16 13 O -0.25 -0.38 7.68 -49.75 -0.38 -0.76 16 14 C 0.20 0.03 6.67 -39.21 -0.26 -0.23 16 15 C -0.21 0.81 9.04 -39.43 -0.36 0.45 16 16 C -0.02 0.10 8.66 -39.61 -0.34 -0.24 16 17 C -0.16 0.38 5.39 -104.60 -0.56 -0.18 16 18 C -0.07 0.21 2.82 36.00 0.10 0.31 16 19 O -0.52 0.43 12.77 -35.23 -0.45 -0.02 16 20 Si 0.69 -2.70 29.78 -169.99 -5.06 -7.76 16 21 C 0.01 0.00 9.11 -39.61 -0.36 -0.36 16 22 C -0.08 -0.18 6.87 -79.80 -0.55 -0.72 16 23 N 0.03 0.17 4.45 34.03 0.15 0.33 16 24 O -0.18 -1.23 18.45 -29.46 -0.54 -1.77 16 25 O -0.12 -0.96 17.24 -36.49 -0.63 -1.59 16 26 C -0.15 0.61 7.43 -25.93 -0.19 0.42 16 27 H 0.11 -0.88 8.14 -51.93 -0.42 -1.31 16 28 H 0.11 -0.82 7.85 -51.93 -0.41 -1.23 16 29 H 0.08 -0.57 8.14 -51.93 -0.42 -0.99 16 30 H 0.11 -0.78 8.10 -51.93 -0.42 -1.20 16 31 H 0.40 -3.01 8.70 -40.82 -0.36 -3.36 16 32 H 0.10 -0.65 7.66 -51.93 -0.40 -1.05 16 33 H 0.10 -0.71 7.66 -51.93 -0.40 -1.11 16 34 H 0.16 -1.17 6.30 -52.49 -0.33 -1.50 16 35 H 0.15 -1.02 4.87 -52.49 -0.26 -1.28 16 36 H 0.13 -0.44 7.96 -51.93 -0.41 -0.85 16 37 H 0.38 -1.41 8.70 45.56 0.40 -1.01 16 38 H -0.26 0.61 7.11 56.52 0.40 1.01 16 39 H -0.25 0.00 7.11 56.52 0.40 0.40 16 40 H 0.16 0.04 7.61 -52.48 -0.40 -0.36 16 41 H 0.10 -0.45 7.90 -51.92 -0.41 -0.86 16 42 H 0.07 -0.17 8.14 -51.93 -0.42 -0.60 16 LS Contribution 373.10 15.07 5.62 5.62 Total: 0.00 -15.33 373.10 -9.39 -24.72 By element: Atomic # 1 Polarization: -12.22 SS G_CDS: -4.67 Total: -16.89 kcal Atomic # 6 Polarization: 2.54 SS G_CDS: -3.70 Total: -1.17 kcal Atomic # 7 Polarization: 1.68 SS G_CDS: 0.65 Total: 2.33 kcal Atomic # 8 Polarization: -4.62 SS G_CDS: -2.24 Total: -6.86 kcal Atomic # 14 Polarization: -2.70 SS G_CDS: -5.06 Total: -7.76 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -15.33 -9.39 -24.72 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_4549638.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 12.976 kcal (2) G-P(sol) polarization free energy of solvation -15.333 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.357 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.391 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.725 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.749 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds