Wall clock time and date at job start Tue Mar 9 2021 13:05:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13602 * 1 3 3 C 1.47201 * 179.97438 * 2 1 4 4 C 1.53006 * 109.47093 * 42.64174 * 3 2 1 5 5 H 1.08997 * 112.85098 * 314.67162 * 4 3 2 6 6 C 1.53774 * 113.61380 * 183.47094 * 4 3 2 7 7 C 1.53783 * 87.07931 * 220.02150 * 6 4 3 8 8 H 1.09001 * 113.61468 * 140.06956 * 7 6 4 9 9 N 1.46497 * 113.61303 * 270.88217 * 7 6 4 10 10 C 1.34781 * 119.99968 * 205.00178 * 9 7 6 11 11 O 1.21546 * 120.00243 * 359.97438 * 10 9 7 12 12 C 1.47851 * 119.99861 * 180.02562 * 10 9 7 13 13 C 1.39553 * 120.14093 * 179.97438 * 12 10 9 14 14 C 1.50704 * 120.07730 * 359.95355 * 13 12 10 15 15 O 1.42899 * 109.47090 * 180.02562 * 14 13 12 16 16 C 1.35901 * 116.99539 * 180.02562 * 15 14 13 17 17 C 1.38714 * 120.05096 * 179.72526 * 16 15 14 18 18 C 1.38165 * 119.94139 * 179.75999 * 17 16 15 19 19 C 1.50706 * 119.97301 * 180.23026 * 18 17 16 20 20 O 1.42898 * 109.46875 * 65.25645 * 19 18 17 21 21 Si 1.86303 * 109.47162 * 185.25743 * 19 18 17 22 22 C 1.38245 * 120.05684 * 0.48844 * 18 17 16 23 23 C 1.38290 * 120.10984 * 359.76356 * 22 18 17 24 24 C 1.38126 * 120.05403 * 0.02562 * 23 22 18 25 25 C 1.37979 * 119.85080 * 179.97438 * 13 12 10 26 26 C 1.38340 * 120.14746 * 359.97438 * 25 13 12 27 27 C 1.38386 * 120.28888 * 0.02562 * 26 25 13 28 28 C 1.37939 * 120.14403 * 359.74037 * 27 26 25 29 29 C 1.53785 * 113.61139 * 85.86300 * 4 3 2 30 30 H 1.09001 * 109.46952 * 282.64441 * 3 2 1 31 31 H 1.08993 * 109.47107 * 162.63942 * 3 2 1 32 32 H 1.08996 * 113.61863 * 334.56949 * 6 4 3 33 33 H 1.09000 * 113.61639 * 105.39103 * 6 4 3 34 34 H 0.97003 * 120.00006 * 25.00058 * 9 7 6 35 35 H 1.08998 * 109.46788 * 300.00451 * 14 13 12 36 36 H 1.09001 * 109.46631 * 60.00042 * 14 13 12 37 37 H 1.07996 * 120.02927 * 359.97438 * 17 16 15 38 38 H 1.08997 * 109.46975 * 305.25705 * 19 18 17 39 39 H 0.96695 * 114.00326 * 60.00430 * 20 19 18 40 40 H 1.48496 * 109.99796 * 180.02562 * 21 19 18 41 41 H 1.48495 * 109.99518 * 301.31794 * 21 19 18 42 42 H 1.08003 * 119.94533 * 179.74438 * 22 18 17 43 43 H 1.08001 * 119.97157 * 179.97438 * 23 22 18 44 44 H 1.08002 * 120.02520 * 179.97438 * 24 23 22 45 45 H 1.07999 * 119.92701 * 180.02562 * 25 13 12 46 46 H 1.07993 * 119.85784 * 180.02562 * 26 25 13 47 47 H 1.07998 * 119.92474 * 179.97438 * 27 26 25 48 48 H 1.08003 * 120.07240 * 180.27984 * 28 27 26 49 49 H 1.08998 * 113.61309 * 254.53027 * 29 4 3 50 50 H 1.08996 * 113.61425 * 25.43402 * 29 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1185 -1.0603 -0.9772 5 1 2.5943 -2.0111 -0.8816 6 6 4.6499 -1.1997 -0.9903 7 6 4.5441 -1.3535 -2.5168 8 1 5.3323 -0.8358 -3.0634 9 7 4.3634 -2.7394 -2.9558 10 6 4.7474 -3.1098 -4.1935 11 8 5.2432 -2.2938 -4.9457 12 6 4.5645 -4.5084 -4.6368 13 6 4.9605 -4.8949 -5.9179 14 6 5.5753 -3.8871 -6.8546 15 8 5.8926 -4.5215 -8.0952 16 6 6.4590 -3.7465 -9.0572 17 6 6.7980 -4.2987 -10.2837 18 6 7.3691 -3.5076 -11.2619 19 6 7.7329 -4.1056 -12.5966 20 8 6.5443 -4.5207 -13.2724 21 14 8.6204 -2.8319 -13.6266 22 6 7.6121 -2.1692 -11.0156 23 6 7.2798 -1.6175 -9.7918 24 6 6.7046 -2.4032 -8.8122 25 6 4.7875 -6.2018 -6.3251 26 6 4.2234 -7.1283 -5.4665 27 6 3.8285 -6.7514 -4.1948 28 6 4.0003 -5.4492 -3.7735 29 6 3.2278 -0.5603 -2.4274 30 1 2.9714 -0.2241 1.0028 31 1 2.9709 0.9816 -0.3066 32 1 5.1733 -0.2962 -0.6777 33 1 5.0112 -2.0948 -0.4839 34 1 3.9674 -3.3906 -2.3557 35 1 4.8680 -3.0769 -7.0316 36 1 6.4849 -3.4845 -6.4089 37 1 6.6124 -5.3453 -10.4751 38 1 8.3835 -4.9667 -12.4437 39 1 5.9177 -3.8041 -13.4422 40 1 8.9841 -3.4092 -14.9456 41 1 7.7558 -1.6395 -13.8155 42 1 8.0624 -1.5534 -11.7801 43 1 7.4710 -0.5717 -9.6016 44 1 6.4457 -1.9720 -7.8564 45 1 5.0939 -6.5024 -7.3162 46 1 4.0905 -8.1500 -5.7899 47 1 3.3884 -7.4794 -3.5294 48 1 3.6959 -5.1574 -2.7792 49 1 2.4425 -0.9406 -3.0807 50 1 3.3617 0.5184 -2.5084 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16534922_4557126.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:17 Heat of formation + Delta-G solvation = 7.729906 kcal Electronic energy + Delta-G solvation = -33030.182374 eV Core-core repulsion = 28569.322572 eV Total energy + Delta-G solvation = -4460.859802 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 379.162 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -41.90622 -41.19135 -40.48059 -39.18880 -38.83911 -37.45518 -37.26174 -34.98965 -33.30855 -32.48656 -32.37931 -31.03033 -30.91114 -27.83541 -26.96607 -26.60780 -25.43463 -24.34923 -23.54725 -23.11176 -21.86688 -21.74138 -20.46674 -19.24580 -19.05415 -18.58104 -17.89898 -17.38782 -17.31954 -17.04353 -16.99099 -16.59252 -16.35364 -16.32207 -16.11550 -15.91596 -15.74993 -15.56816 -15.38397 -14.91596 -14.79601 -14.50660 -14.38973 -14.11226 -14.07773 -14.00411 -13.69528 -13.66934 -13.62600 -13.29924 -13.23402 -12.93733 -12.81027 -12.62878 -12.41754 -12.28869 -12.18416 -12.07139 -11.87952 -11.73364 -11.50156 -11.43138 -10.89033 -10.57539 -10.32012 -10.06128 -9.89076 -9.81551 -9.13297 -4.91043 -0.30590 0.20148 0.31653 0.50991 1.31735 1.64520 1.73495 1.76141 1.80670 1.89354 1.97728 2.16166 2.67811 2.77147 2.83577 3.20710 3.37569 3.42571 3.46847 3.55838 3.62100 3.62748 3.68932 3.74646 3.89838 3.97104 4.01781 4.15808 4.25013 4.27449 4.29269 4.32393 4.36055 4.37062 4.44013 4.49580 4.50694 4.51270 4.61138 4.63894 4.69270 4.73438 4.80596 4.83273 4.86198 4.93783 5.04819 5.10775 5.28345 5.32838 5.40016 5.40838 5.49080 5.54305 5.72724 5.80109 6.28440 6.44836 6.48679 6.57879 7.01891 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.434 5.434 2 C 0.202 3.798 3 C -0.017 4.017 4 C -0.111 4.111 5 H 0.097 0.903 6 C -0.137 4.137 7 C 0.120 3.880 8 H 0.110 0.890 9 N -0.709 5.709 10 C 0.564 3.436 11 O -0.533 6.533 12 C -0.136 4.136 13 C -0.029 4.029 14 C 0.107 3.893 15 O -0.319 6.319 16 C 0.134 3.866 17 C -0.126 4.126 18 C -0.081 4.081 19 C -0.076 4.076 20 O -0.529 6.529 21 Si 0.690 3.310 22 C -0.157 4.157 23 C -0.073 4.073 24 C -0.200 4.200 25 C -0.107 4.107 26 C -0.088 4.088 27 C -0.126 4.126 28 C -0.083 4.083 29 C -0.150 4.150 30 H 0.113 0.887 31 H 0.112 0.888 32 H 0.105 0.895 33 H 0.080 0.920 34 H 0.401 0.599 35 H 0.089 0.911 36 H 0.090 0.910 37 H 0.133 0.867 38 H 0.119 0.881 39 H 0.376 0.624 40 H -0.258 1.258 41 H -0.261 1.261 42 H 0.128 0.872 43 H 0.130 0.870 44 H 0.136 0.864 45 H 0.141 0.859 46 H 0.132 0.868 47 H 0.132 0.868 48 H 0.128 0.872 49 H 0.074 0.926 50 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.491 0.106 5.344 6.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.116 4.116 3 C -0.057 4.057 4 C -0.131 4.131 5 H 0.115 0.885 6 C -0.175 4.175 7 C 0.014 3.986 8 H 0.128 0.872 9 N -0.360 5.360 10 C 0.352 3.648 11 O -0.411 6.411 12 C -0.139 4.139 13 C -0.030 4.030 14 C 0.033 3.967 15 O -0.233 6.233 16 C 0.089 3.911 17 C -0.145 4.145 18 C -0.082 4.082 19 C -0.185 4.185 20 O -0.335 6.335 21 Si 0.592 3.408 22 C -0.175 4.175 23 C -0.092 4.092 24 C -0.219 4.219 25 C -0.125 4.125 26 C -0.106 4.106 27 C -0.144 4.144 28 C -0.102 4.102 29 C -0.189 4.189 30 H 0.131 0.869 31 H 0.130 0.870 32 H 0.123 0.877 33 H 0.099 0.901 34 H 0.237 0.763 35 H 0.107 0.893 36 H 0.108 0.892 37 H 0.150 0.850 38 H 0.137 0.863 39 H 0.224 0.776 40 H -0.183 1.183 41 H -0.185 1.185 42 H 0.145 0.855 43 H 0.147 0.853 44 H 0.153 0.847 45 H 0.159 0.841 46 H 0.150 0.850 47 H 0.150 0.850 48 H 0.146 0.854 49 H 0.092 0.908 50 H 0.117 0.883 Dipole moment (debyes) X Y Z Total from point charges 3.380 0.397 4.116 5.341 hybrid contribution -1.167 -0.201 0.534 1.299 sum 2.213 0.196 4.650 5.154 Atomic orbital electron populations 1.81299 1.13158 1.08206 1.08430 1.29218 0.95343 0.93601 0.93454 1.19339 0.81689 1.01965 1.02731 1.22635 0.96720 0.98800 0.94912 0.88493 1.23382 0.95000 1.03991 0.95090 1.21876 0.98783 0.82192 0.95735 0.87236 1.45565 1.63813 1.11289 1.15349 1.18256 0.77473 0.87502 0.81555 1.90756 1.43873 1.53264 1.53195 1.19564 1.05849 0.93519 0.95003 1.19627 0.96256 0.94684 0.92454 1.21682 1.00887 0.93209 0.80954 1.85945 1.75769 1.38327 1.23268 1.18937 0.93633 0.89731 0.88802 1.20232 1.02696 1.00933 0.90595 1.20037 0.98671 0.93648 0.95826 1.25070 0.91958 1.08330 0.93175 1.86604 1.30376 1.38169 1.78342 0.94848 0.88107 0.76958 0.80905 1.20963 1.03714 0.94613 0.98214 1.20922 0.96089 0.99779 0.92363 1.21454 1.05459 0.93318 1.01666 1.21089 0.98622 0.91933 1.00890 1.21486 0.95592 1.00016 0.93484 1.21192 1.00409 0.96063 0.96685 1.21208 0.97129 0.93196 0.98642 1.23620 0.98254 1.01200 0.95817 0.86888 0.87000 0.87681 0.90125 0.76275 0.89311 0.89185 0.84955 0.86299 0.77626 1.18292 1.18549 0.85484 0.85257 0.84671 0.84102 0.85000 0.84983 0.85409 0.90772 0.88309 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.66 18.54 42.15 0.78 -0.88 16 2 C 0.20 -0.09 15.42 -20.76 -0.32 -0.41 16 3 C -0.02 0.09 5.53 -29.51 -0.16 -0.07 16 4 C -0.11 0.58 3.48 -89.81 -0.31 0.27 16 5 H 0.10 -0.49 8.13 -51.93 -0.42 -0.91 16 6 C -0.14 0.80 7.39 -25.92 -0.19 0.60 16 7 C 0.12 -0.38 4.33 -67.03 -0.29 -0.67 16 8 H 0.11 -0.18 7.46 -51.93 -0.39 -0.57 16 9 N -0.71 1.74 5.21 -53.87 -0.28 1.46 16 10 C 0.56 0.33 7.75 -12.32 -0.10 0.24 16 11 O -0.53 -1.68 13.01 5.33 0.07 -1.61 16 12 C -0.14 -0.05 5.87 -104.97 -0.62 -0.66 16 13 C -0.03 -0.04 5.91 -104.22 -0.62 -0.66 16 14 C 0.11 0.23 3.38 36.01 0.12 0.35 16 15 O -0.32 -0.94 8.62 -19.43 -0.17 -1.11 16 16 C 0.13 0.39 6.69 -39.22 -0.26 0.13 16 17 C -0.13 -0.32 9.63 -39.43 -0.38 -0.70 16 18 C -0.08 -0.11 5.35 -104.64 -0.56 -0.67 16 19 C -0.08 -0.05 2.80 36.01 0.10 0.05 16 20 O -0.53 -1.10 12.84 -35.23 -0.45 -1.55 16 21 Si 0.69 -0.26 29.88 -169.99 -5.08 -5.34 16 22 C -0.16 -0.12 8.67 -39.56 -0.34 -0.46 16 23 C -0.07 -0.07 10.04 -39.60 -0.40 -0.47 16 24 C -0.20 -0.41 9.04 -39.44 -0.36 -0.77 16 25 C -0.11 -0.08 9.37 -39.64 -0.37 -0.45 16 26 C -0.09 0.07 10.04 -39.49 -0.40 -0.32 16 27 C -0.13 0.21 10.03 -39.64 -0.40 -0.18 16 28 C -0.08 0.14 9.54 -39.19 -0.37 -0.23 16 29 C -0.15 0.53 7.44 -25.83 -0.19 0.34 16 30 H 0.11 -0.83 8.14 -51.93 -0.42 -1.25 16 31 H 0.11 -0.79 7.87 -51.93 -0.41 -1.20 16 32 H 0.10 -0.73 8.10 -51.93 -0.42 -1.15 16 33 H 0.08 -0.49 8.14 -51.93 -0.42 -0.91 16 34 H 0.40 -1.88 6.74 -40.82 -0.27 -2.16 16 35 H 0.09 0.24 6.87 -51.93 -0.36 -0.12 16 36 H 0.09 0.22 6.86 -51.93 -0.36 -0.14 16 37 H 0.13 0.30 8.06 -52.49 -0.42 -0.12 16 38 H 0.12 -0.02 7.96 -51.93 -0.41 -0.43 16 39 H 0.38 -0.26 8.70 45.56 0.40 0.14 16 40 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 41 H -0.26 -0.39 7.01 56.52 0.40 0.00 16 42 H 0.13 -0.12 4.84 -52.48 -0.25 -0.38 16 43 H 0.13 -0.14 8.06 -52.49 -0.42 -0.56 16 44 H 0.14 0.21 6.30 -52.49 -0.33 -0.12 16 45 H 0.14 0.10 7.00 -52.49 -0.37 -0.27 16 46 H 0.13 -0.36 8.06 -52.49 -0.42 -0.78 16 47 H 0.13 -0.50 8.06 -52.49 -0.42 -0.92 16 48 H 0.13 -0.60 6.41 -52.48 -0.34 -0.93 16 49 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 50 H 0.10 -0.43 7.92 -51.93 -0.41 -0.84 16 LS Contribution 417.70 15.07 6.29 6.29 Total: 0.00 -10.20 417.70 -11.75 -21.95 By element: Atomic # 1 Polarization: -7.97 SS G_CDS: -6.51 Total: -14.47 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -6.41 Total: -4.75 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: 0.50 Total: 0.58 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -0.55 Total: -4.27 kcal Atomic # 14 Polarization: -0.26 SS G_CDS: -5.08 Total: -5.34 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -10.20 -11.75 -21.95 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_4557126.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 29.684 kcal (2) G-P(sol) polarization free energy of solvation -10.201 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 19.483 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.753 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.954 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.730 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds