Wall clock time and date at job start Tue Mar 9 2021 13:05:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13609 * 1 3 3 C 1.47192 * 179.97438 * 2 1 4 4 C 1.53003 * 109.47083 * 302.48605 * 3 2 1 5 5 H 1.08998 * 112.90553 * 316.24783 * 4 3 2 6 6 C 1.53787 * 113.61385 * 185.00379 * 4 3 2 7 7 C 1.53784 * 87.07923 * 220.01697 * 6 4 3 8 8 H 1.08993 * 113.61313 * 139.97752 * 7 6 4 9 9 N 1.46501 * 113.61123 * 270.88223 * 7 6 4 10 10 C 1.34781 * 119.99552 * 204.99529 * 9 7 6 11 11 O 1.21273 * 120.00172 * 0.02562 * 10 9 7 12 12 C 1.50702 * 119.99750 * 179.97438 * 10 9 7 13 13 O 1.42899 * 109.47031 * 180.02562 * 12 10 9 14 14 C 1.35914 * 116.99756 * 180.02562 * 13 12 10 15 15 C 1.38673 * 120.06314 * 359.72576 * 14 13 12 16 16 C 1.38182 * 119.95699 * 179.72223 * 15 14 13 17 17 C 1.38244 * 120.07275 * 0.53028 * 16 15 14 18 18 C 1.50701 * 119.94275 * 179.74885 * 17 16 15 19 19 O 1.42906 * 109.46722 * 245.02083 * 18 17 16 20 20 Si 1.86295 * 109.47399 * 5.01661 * 18 17 16 21 21 C 1.38291 * 120.11603 * 359.76715 * 17 16 15 22 22 C 1.38196 * 120.04119 * 359.95487 * 21 17 16 23 23 Br 1.89101 * 120.03327 * 180.02562 * 22 21 17 24 24 C 1.53778 * 113.61726 * 87.50629 * 4 3 2 25 25 H 1.08996 * 109.47111 * 182.48669 * 3 2 1 26 26 H 1.09005 * 109.47589 * 62.48252 * 3 2 1 27 27 H 1.09004 * 113.61202 * 334.56449 * 6 4 3 28 28 H 1.08994 * 113.61447 * 105.46881 * 6 4 3 29 29 H 0.96998 * 120.00259 * 25.00269 * 9 7 6 30 30 H 1.09000 * 109.47285 * 300.00722 * 12 10 9 31 31 H 1.08993 * 109.46779 * 60.00471 * 12 10 9 32 32 H 1.08007 * 120.01852 * 359.97438 * 15 14 13 33 33 H 1.08005 * 119.96981 * 180.27718 * 16 15 14 34 34 H 1.08999 * 109.47382 * 125.02339 * 18 17 16 35 35 H 0.96700 * 113.99878 * 180.02562 * 19 18 17 36 36 H 1.48498 * 109.99955 * 300.00684 * 20 18 17 37 37 H 1.48509 * 109.99560 * 61.32004 * 20 18 17 38 38 H 1.07993 * 119.97936 * 179.97438 * 21 17 16 39 39 H 1.08999 * 113.61111 * 254.53134 * 24 4 3 40 40 H 1.08999 * 113.61280 * 25.34517 * 24 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1183 -0.7739 1.2168 5 1 2.5759 -0.5331 2.1310 6 6 4.6471 -0.7302 1.3780 7 6 4.5678 -2.2113 1.7842 8 1 5.3743 -2.8199 1.3754 9 7 4.3712 -2.4159 3.2215 10 6 4.7721 -3.5656 3.7995 11 8 5.2959 -4.4304 3.1299 12 6 4.5704 -3.7758 5.2781 13 8 5.0740 -5.0605 5.6496 14 6 4.9681 -5.4097 6.9588 15 6 4.3969 -4.5320 7.8679 16 6 4.2852 -4.8916 9.1974 17 6 4.7522 -6.1208 9.6242 18 6 4.6340 -6.5077 11.0759 19 8 5.9397 -6.6369 11.6422 20 14 3.6864 -5.1924 11.9940 21 6 5.3279 -6.9959 8.7213 22 6 5.4369 -6.6435 7.3895 23 35 6.2235 -7.8406 6.1550 24 6 3.2666 -2.2841 0.9680 25 1 2.9709 1.0275 0.0446 26 1 2.9716 -0.4740 -0.9114 27 1 5.1802 -0.5620 0.4423 28 1 4.9828 -0.0745 2.1814 29 1 3.9525 -1.7240 3.7571 30 1 5.1041 -3.0029 5.8311 31 1 3.5071 -3.7207 5.5111 32 1 4.0359 -3.5696 7.5362 33 1 3.8363 -4.2100 9.9048 34 1 4.1071 -7.4584 11.1569 35 1 5.9402 -6.8851 12.5768 36 1 4.3945 -3.8912 11.8911 37 1 2.3159 -5.0704 11.4351 38 1 5.6923 -7.9554 9.0572 39 1 2.4878 -2.8829 1.4402 40 1 3.4208 -2.5409 -0.0801 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16534922_6201210.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:05:35 Heat of formation + Delta-G solvation = -13.277984 kcal Electronic energy + Delta-G solvation = -25167.765084 eV Core-core repulsion = 21190.156109 eV Total energy + Delta-G solvation = -3977.608975 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.041 amu Computer time = 0.69 seconds Orbital eigenvalues (eV) -41.84116 -41.17603 -39.81969 -38.92334 -37.49783 -37.25879 -34.76062 -33.76568 -32.16474 -31.39997 -30.56892 -29.44076 -26.62288 -26.38014 -24.68591 -23.90280 -22.44620 -21.91011 -20.31973 -19.69828 -18.83608 -18.41306 -18.18445 -17.60394 -17.48576 -16.92883 -16.71616 -16.06829 -16.02323 -15.89018 -15.56286 -15.47561 -15.22832 -14.72819 -14.52805 -14.21319 -14.10367 -14.04303 -13.94509 -13.66193 -13.59672 -13.34932 -13.10005 -12.65599 -12.38664 -12.32663 -12.19659 -12.02209 -11.92269 -11.87400 -11.47045 -11.29430 -11.12513 -11.06114 -10.30816 -10.14046 -10.09957 -9.44180 -4.90315 -0.23377 -0.01863 0.51719 1.31416 1.33213 1.38803 1.68076 1.82105 1.87096 1.96136 2.22294 2.43029 3.07662 3.29723 3.39778 3.53275 3.54362 3.62149 3.70319 3.83766 3.88077 3.93091 3.95832 3.97133 4.00354 4.18987 4.41380 4.42279 4.52550 4.66658 4.69970 4.76095 4.79842 4.85641 4.91620 4.96033 5.08075 5.10225 5.17860 5.25306 5.32265 5.61506 5.92640 6.40420 6.66870 6.91730 7.09776 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.519 5.519 2 C 0.234 3.766 3 C -0.016 4.016 4 C -0.099 4.099 5 H 0.100 0.900 6 C -0.115 4.115 7 C 0.105 3.895 8 H 0.084 0.916 9 N -0.693 5.693 10 C 0.515 3.485 11 O -0.565 6.565 12 C 0.029 3.971 13 O -0.301 6.301 14 C 0.150 3.850 15 C -0.191 4.191 16 C -0.077 4.077 17 C -0.120 4.120 18 C -0.081 4.081 19 O -0.565 6.565 20 Si 0.776 3.224 21 C -0.030 4.030 22 C -0.141 4.141 23 Br -0.042 7.042 24 C -0.156 4.156 25 H 0.145 0.855 26 H 0.135 0.865 27 H 0.122 0.878 28 H 0.094 0.906 29 H 0.420 0.580 30 H 0.130 0.870 31 H 0.126 0.874 32 H 0.176 0.824 33 H 0.139 0.861 34 H 0.093 0.907 35 H 0.404 0.596 36 H -0.287 1.287 37 H -0.283 1.283 38 H 0.148 0.852 39 H 0.051 0.949 40 H 0.105 0.895 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.888 6.423 5.716 8.644 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.197 5.197 2 C -0.083 4.083 3 C -0.055 4.055 4 C -0.119 4.119 5 H 0.119 0.881 6 C -0.152 4.152 7 C 0.000 4.000 8 H 0.102 0.898 9 N -0.347 5.347 10 C 0.301 3.699 11 O -0.443 6.443 12 C -0.048 4.048 13 O -0.213 6.213 14 C 0.102 3.898 15 C -0.210 4.210 16 C -0.094 4.094 17 C -0.121 4.121 18 C -0.190 4.190 19 O -0.376 6.376 20 Si 0.680 3.320 21 C -0.050 4.050 22 C -0.221 4.221 23 Br 0.043 6.957 24 C -0.195 4.195 25 H 0.163 0.837 26 H 0.152 0.848 27 H 0.140 0.860 28 H 0.113 0.887 29 H 0.258 0.742 30 H 0.147 0.853 31 H 0.144 0.856 32 H 0.193 0.807 33 H 0.156 0.844 34 H 0.111 0.889 35 H 0.255 0.745 36 H -0.215 1.215 37 H -0.210 1.210 38 H 0.166 0.834 39 H 0.070 0.930 40 H 0.123 0.877 Dipole moment (debyes) X Y Z Total from point charges -0.302 6.160 3.940 7.319 hybrid contribution -0.061 0.008 -0.138 0.151 sum -0.363 6.168 3.802 7.255 Atomic orbital electron populations 1.81327 1.15892 1.11529 1.10989 1.30138 0.96157 0.90863 0.91102 1.19729 0.78234 1.06062 1.01489 1.22556 0.97292 0.93968 0.98078 0.88147 1.23336 0.94424 0.93010 1.04470 1.21970 0.98549 0.99767 0.79714 0.89819 1.45367 1.61890 1.17882 1.09597 1.20377 0.77848 0.82363 0.89326 1.90787 1.43736 1.44090 1.65664 1.22878 1.03370 0.85265 0.93297 1.86248 1.77422 1.35719 1.21887 1.18720 0.94811 0.92660 0.83643 1.21450 1.05071 1.01607 0.92851 1.21076 0.97205 0.95127 0.96029 1.19654 1.02084 0.94797 0.95543 1.24875 0.91344 1.10255 0.92498 1.86453 1.26084 1.93251 1.31770 0.94018 0.74749 0.75137 0.88081 1.20964 0.94601 1.00362 0.89062 1.21335 1.10390 0.95266 0.95101 1.96760 1.81162 1.59077 1.58701 1.23659 0.97210 0.96905 1.01716 0.83707 0.84765 0.85957 0.88714 0.74180 0.85267 0.85609 0.80702 0.84418 0.88926 0.74470 1.21481 1.21011 0.83394 0.92995 0.87671 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -4.45 18.54 20.00 0.37 -4.08 16 2 C 0.23 -0.33 15.42 89.44 1.38 1.05 16 3 C -0.02 0.21 5.54 28.79 0.16 0.37 16 4 C -0.10 1.24 3.49 -10.27 -0.04 1.20 16 5 H 0.10 -1.26 8.12 -2.39 -0.02 -1.28 16 6 C -0.11 1.59 7.39 31.12 0.23 1.82 16 7 C 0.11 -0.64 4.32 45.52 0.20 -0.44 16 8 H 0.08 -0.03 7.47 -2.39 -0.02 -0.05 16 9 N -0.69 4.39 5.26 -440.04 -2.32 2.08 16 10 C 0.52 0.93 7.91 87.66 0.69 1.62 16 11 O -0.57 -7.75 16.10 16.03 0.26 -7.49 16 12 C 0.03 -0.10 5.22 71.24 0.37 0.28 16 13 O -0.30 -2.02 9.01 -73.54 -0.66 -2.68 16 14 C 0.15 0.84 6.68 22.52 0.15 0.99 16 15 C -0.19 0.00 9.04 22.36 0.20 0.20 16 16 C -0.08 -0.12 8.66 22.26 0.19 0.07 16 17 C -0.12 -0.39 5.39 -19.85 -0.11 -0.50 16 18 C -0.08 0.18 2.79 71.24 0.20 0.38 16 19 O -0.57 0.82 12.81 -148.98 -1.91 -1.09 16 20 Si 0.78 -3.94 29.85 68.60 2.05 -1.89 16 21 C -0.03 -0.17 9.42 22.27 0.21 0.04 16 22 C -0.14 -1.15 6.24 22.40 0.14 -1.01 16 23 Br -0.04 -0.44 33.16 -20.37 -0.68 -1.11 16 24 C -0.16 1.08 7.43 31.12 0.23 1.31 16 25 H 0.15 -2.69 8.14 -2.39 -0.02 -2.71 16 26 H 0.13 -2.25 7.84 -2.38 -0.02 -2.27 16 27 H 0.12 -2.03 8.10 -2.39 -0.02 -2.05 16 28 H 0.09 -1.49 8.14 -2.39 -0.02 -1.51 16 29 H 0.42 -5.78 8.70 -92.71 -0.81 -6.58 16 30 H 0.13 -1.29 7.65 -2.39 -0.02 -1.31 16 31 H 0.13 -1.19 7.67 -2.39 -0.02 -1.21 16 32 H 0.18 -1.44 6.30 -2.91 -0.02 -1.46 16 33 H 0.14 -0.15 4.86 -2.91 -0.01 -0.16 16 34 H 0.09 -0.54 7.96 -2.39 -0.02 -0.56 16 35 H 0.40 -4.82 8.74 -74.06 -0.65 -5.47 16 36 H -0.29 -0.32 7.05 99.48 0.70 0.38 16 37 H -0.28 0.07 7.11 99.48 0.71 0.78 16 38 H 0.15 0.57 8.06 -2.91 -0.02 0.55 16 39 H 0.05 -0.11 8.14 -2.39 -0.02 -0.13 16 40 H 0.10 -0.86 7.89 -2.39 -0.02 -0.88 16 Total: 0.00 -35.81 367.59 1.02 -34.79 By element: Atomic # 1 Polarization: -25.61 SS G_CDS: -0.31 Total: -25.92 kcal Atomic # 6 Polarization: 3.18 SS G_CDS: 4.21 Total: 7.39 kcal Atomic # 7 Polarization: -0.06 SS G_CDS: -1.94 Total: -2.00 kcal Atomic # 8 Polarization: -8.95 SS G_CDS: -2.31 Total: -11.26 kcal Atomic # 14 Polarization: -3.94 SS G_CDS: 2.05 Total: -1.89 kcal Atomic # 35 Polarization: -0.44 SS G_CDS: -0.68 Total: -1.11 kcal Total: -35.81 1.02 -34.79 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16534922_6201210.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.517 kcal (2) G-P(sol) polarization free energy of solvation -35.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -14.294 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.795 kcal (6) G-S(sol) free energy of system = (1) + (5) -13.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds